CuGenDBv2

Gene ID	Tan0011766
Organism	Trichosanthes anguina (Snake gourd v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	LG07:30809490..30826853
RNA-Seq Expression	Tan0011766
Synteny	Tan0011766
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

8.5e-159

96.59

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.5e-159

96.59

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022157893.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia]

8.5e-159

96.25

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD+T+VPRT IDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

8.5e-159

96.59

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

7.2e-158

96.25

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

6.0e-158

96.58

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ T+VPRT IDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

6.0e-158

96.58

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELED+ T+VPRT IDDEYANASE+DPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG
        RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-159

96.25

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDD+T+VPRT IDDEYAN SE+DPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-159

96.59

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

3.5e-158

96.25

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RRNIRLRREYLYRKSLEGK+RLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD T+VPRT IDDEYANAS+IDPKILITTSRDPSAPLTQF
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.82

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR  RLRREYLYRK+ E  +R   E+K K+R ALEE + IPTELR E  AL+  +E +D         +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D++RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.82

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR  RLRREYLYRK+ E   R + EKK +++ ALEE + IPTELR E  AL+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

6.9e-87

55.82

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR  RLRREYLYRK+ E   R   E+K ++R ALEE + IPTELR E  AL+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

4.1e-87

55.82

Show/hide

Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR  RLRREYLYRK+ E   R + EKK +++ ALEE + IPTELR E  AL+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

6.9e-87

55.82

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Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR  RLRREYLYRK+ E   R   E+K ++R ALEE + IPTELR E  AL+  +E +D       + +DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL
        R ++IL++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

3.3e-132

76.19

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Query:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG +R +YE+KR IREAL+EGKPIPTELRN EA LR+EI+LED +T+VPR+ IDDEYANA+E DPKIL+TTSR+PSAPL +F
Subjt:  MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVISEIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
        R  NILKH+FP PK D KR+VTF+NQSDYISFR+H+Y+K  GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Subjt:  RTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

1.0e-37

35.4

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Query:  RREYLYRKSLEGKD-RLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIEL--EDDHTSVPRTL------------IDDEYANAS------------EI
        +R  +    ++ KD R     K+K  + LE+ K    ++R  +AA ++ +EL  E     +P+T+             DDE   A             EI
Subjt:  RREYLYRKSLEGKD-RLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIEL--EDDHTSVPRTL------------IDDEYANAS------------EI

Query:  DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGT
         PK+L+TT R  S        EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G 
Subjt:  DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGT

Query:  MPEAYPHIILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQ
             P ++LNNFTT+LG R     + LFP P P+   +RVVTF NQ D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D 
Subjt:  MPEAYPHIILNNFTTKLGERTANILKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQ

Query:  TEAQNEWVIRPYMKTTKKRKFL
           + EWV +P M T+++R FL
Subjt:  TEAQNEWVIRPYMKTTKKRKFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCGCGAAGAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAAGGCAAGGATCGTTTGCTCTATGAGAAGAAGCGGAAGATAAGAGAAGCCCTTGA
AGAGGGCAAACCTATTCCTACTGAACTCCGTAATGAGGAGGCGGCACTTCGTAAAGAAATTGAACTTGAGGATGATCACACGTCAGTCCCTAGGACACTCATTGATGATG
AGTATGCGAATGCTTCAGAAATTGATCCTAAAATTTTGATTACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTGAAAATTGTTTTTCCCAAT
GCTCAACGAATGAACCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTTATTTTAGTTCATGAGCATCGTGGCGTGCCAGA
TGGTTTAATTATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGACATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTG
AGGCCTATCCACACATAATTTTGAACAACTTTACCACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTG
GTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCCATCGAGCTGAAGGAGATCGGTCCTCGGTTTGAATT
GCGACTGTATCAGATAAAGTTGGGAACTGTTGATCAAACGGAAGCTCAAAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATT
GA

mRNA sequence

Show/hide mRNA sequence

GTCTCATCTTTGTGTGAGAGAGAGCTGCACGTCACGAGTGAGAGAGTGAGGGGGCAGCCGCACATCACAGAAAACCGAAGAACAAGGAAGCGCAGCCCTTGGGCCTCGCT
TTGTCGTCGTCTACGTCGATTTTCGGCTGAACACCGGTGTGAGCAGGGTGTTTTACGGTGTGGGTCTCGCCGTGAATCGTTCTCAGAACTGGGTGATTTCAGTGTGGTCT
CGCCGTGGAATTGAACTCAGAACAGTGGGTCTCGGTGTTTGCTGGCTGTCGGAGTCGGTTTCTGTGTGGGTCTGTGAGTCCGTGGGTGTCGGCTTGGTCATCGACACAGC
AGGGTCTTCGATTTCCAGTGTGCCCCTCGGTTAAGACAAGACAGAAATCGGTAGGCACGTGGGTCTTGGTGTATAAGGCTGAAAATGTTGTGATCGTGTTAACTCCGGTA
ATTTCGAAGGCTATTTTTAACAGTGGTATTCAATTGGAGCTCAAGTCGGTCAAAGAATTTGAGAAAATGAAAATGGTTTAAAACCATGTCTTGGCCAATTGAGTAAAGGG
TGTCGTCTTCACCAAGCTTCTAACAATGGCATGAAGTATTTGTGGAGCAGCCATGAGTTCTCAAAACGGGAAGTGGTCGGTCCCCAAGTAATTTCACAAAAAATCAGGGC
AATACTCAATAGGATAGTGATCAAATGTAACTCTTACCAAACGTGAAACAAGTTGAACCAAGCTTCAATAGTCAATCATTGGTGATCAGGATTTTCACGGAATTTTGACC
AAGTAAATCACCCATTTTAAAGAGGGATGTCTATGAGGTGATAATAAGCAATCAGCTTGTTGAAGACTCTAGGTGGGGGTTTGACAAATAGACTTAAGCAATGTCGCGAA
GAAACATTCGACTGAGGAGGGAGTATTTGTACCGAAAGAGTTTAGAAGGCAAGGATCGTTTGCTCTATGAGAAGAAGCGGAAGATAAGAGAAGCCCTTGAAGAGGGCAAA
CCTATTCCTACTGAACTCCGTAATGAGGAGGCGGCACTTCGTAAAGAAATTGAACTTGAGGATGATCACACGTCAGTCCCTAGGACACTCATTGATGATGAGTATGCGAA
TGCTTCAGAAATTGATCCTAAAATTTTGATTACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTGAAAATTGTTTTTCCCAATGCTCAACGAA
TGAACCGTGGTGGTCAGGTGATCTCAGAGATTATAGAGACCTGCCGTGCTCACGAATTTACAGATGTTATTTTAGTTCATGAGCATCGTGGCGTGCCAGATGGTTTAATT
ATCAGCCATCTTCCTTTTGGTCCAACTGCATATTTTGGATTGTTGAATGTGGTTACCAGACATGAAATTAAGGACAAAAAAGCTATGGGAACGATGCCTGAGGCCTATCC
ACACATAATTTTGAACAACTTTACCACGAAGTTGGGTGAAAGGACGGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTG
CTAATCAGTCTGACTATATTTCATTCAGGCATCATATTTATGAGAAGCATGGAGGTGCTAAATCCATCGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGACTGTAT
CAGATAAAGTTGGGAACTGTTGATCAAACGGAAGCTCAAAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCAAGTTCCTTGGTGATTGAGAAACGGC
TTAAGGAACAAGATTGTATTCTACTTTTTTATTTATTTTTTTATTTTTTAGCATAATCACATTTTTATTAAAAATTATATTTTGTTCGGTTGGGAATACCGGAATTTCTT
TAGAACAAGTAGTTGAAATTGTTTGCAAATTCCATCAAAGTATACGAATTCTGATTATATATAAAAAATGAGTCGACTTGAAA

Protein sequence

Show/hide protein sequence

MSRRNIRLRREYLYRKSLEGKDRLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDHTSVPRTLIDDEYANASEIDPKILITTSRDPSAPLTQFAKELKIVFPN
AQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV
VTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Tan0011766 (gene) of Snake gourd v1 genome