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Tan0011777 (gene) of Snake gourd v1 genome

Gene IDTan0011777
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMannan endo-1,4-beta-mannosidase 4-like
Genome locationLG11:6701574..6701789
RNA-Seq ExpressionTan0011777
SyntenyTan0011777
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058710.1 protein RALF-like 7 [Cucumis melo var. makuwa]5.3e-0650.7Show/hide
Query:  MATST-KILAMCVIMIMVCSFLVETINAT-TLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        MA++T KILA+ + MIMVCS +V   NA  +L Y AI  D   +C  G C+ L  PAN YNRGCE    CR
Subjt:  MATST-KILAMCVIMIMVCSFLVETINAT-TLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

KAE8648219.1 hypothetical protein Csa_018424, partial [Cucumis sativus]1.7e-0752.24Show/hide
Query:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        T+  +  + V MIMVCS +    NAT+L Y AI   G  RC+ GKC ILG PAN Y RGCE  E CR
Subjt:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

KAE8648222.1 hypothetical protein Csa_023891, partial [Cucumis sativus]1.7e-0752.24Show/hide
Query:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        T+  +  + V MIMVCS +    NAT+L Y AI   G  RC+ GKC ILG PAN Y RGCE  E CR
Subjt:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

KAG6603811.1 hypothetical protein SDJN03_04420, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1152.86Show/hide
Query:  MATSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRG
        MA STK+ A+C+IM++V SF+V    A +L Y A+  D   +C  GKC  LG PAN YNRGCEA + CRG
Subjt:  MATSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRG

KGN49664.1 hypothetical protein Csa_018501 [Cucumis sativus]1.7e-0752.24Show/hide
Query:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        T+  +  + V MIMVCS +    NAT+L Y AI   G  RC+ GKC ILG PAN Y RGCE  E CR
Subjt:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

TrEMBL top hitse value%identityAlignment
A0A0A0KJT5 Uncharacterized protein5.2e-0747.76Show/hide
Query:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        T+  ++ + + MIM CS +    NAT+L Y  I   G  RC+ GKC ILG PAN Y RGCE  E CR
Subjt:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

A0A0A0KLD0 Uncharacterized protein8.0e-0852.24Show/hide
Query:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        T+  +  + V MIMVCS +    NAT+L Y AI   G  RC+ GKC ILG PAN Y RGCE  E CR
Subjt:  TSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

A0A200RBE7 Lipid-A-disaccharide synthase6.3e-0543.28Show/hide
Query:  TKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRGD
        +++L +C+ + +VCS L+E+  ATTL Y  +  DG P C   KC       N YNRGCE + RCR D
Subjt:  TKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRGD

A0A5A7UUI8 Protein RALF-like 72.6e-0650.7Show/hide
Query:  MATST-KILAMCVIMIMVCSFLVETINAT-TLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR
        MA++T KILA+ + MIMVCS +V   NA  +L Y AI  D   +C  G C+ L  PAN YNRGCE    CR
Subjt:  MATST-KILAMCVIMIMVCSFLVETINAT-TLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCR

A0A650ERE4 Rapid alkalinization factor 71.4e-0436.36Show/hide
Query:  TKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRG
        +K   +C++ ++VCS  +ET++  ++ Y A+  D    CR  +C  L  P++ Y+RGCE  E+CRG
Subjt:  TKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCTCGACTAAAATATTGGCAATGTGCGTCATTATGATAATGGTGTGCTCATTTCTAGTAGAGACAATAAATGCAACTACTCTTCATTATGACGCCATCGCTCT
GGATGGAAGACCAAGATGTAGATCGGGTAAGTGCAGAATACTAGGACGTCCAGCCAACAAATATAATAGAGGATGTGAGGCTATTGAAAGGTGCAGAGGCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCTCGACTAAAATATTGGCAATGTGCGTCATTATGATAATGGTGTGCTCATTTCTAGTAGAGACAATAAATGCAACTACTCTTCATTATGACGCCATCGCTCT
GGATGGAAGACCAAGATGTAGATCGGGTAAGTGCAGAATACTAGGACGTCCAGCCAACAAATATAATAGAGGATGTGAGGCTATTGAAAGGTGCAGAGGCGACTAA
Protein sequenceShow/hide protein sequence
MATSTKILAMCVIMIMVCSFLVETINATTLHYDAIALDGRPRCRSGKCRILGRPANKYNRGCEAIERCRGD