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Tan0011823 (gene) of Snake gourd v1 genome

Gene IDTan0011823
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein RALF-like 17
Genome locationLG05:4882478..4883122
RNA-Seq ExpressionTan0011823
SyntenyTan0011823
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054503.1 hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa]8.0e-3369.49Show/hide
Query:  MAVSRRLAL-LSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLR-EAEKS
        MA+SRRLAL LSLGT IL  FLFTR + A SDYG+DIHTVRHP     CK E  D+GDQCRE+ND  EDDDFDDTYKIVNNIA+TLS+SGS+L+ +AE+S
Subjt:  MAVSRRLAL-LSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLR-EAEKS

Query:  EDTPASEEELGNMFVLGH
        +D P+SEEE+GNM ++GH
Subjt:  EDTPASEEELGNMFVLGH

KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]4.5e-2867.24Show/hide
Query:  MAVSRRLAL-LSLGTIILLCFLFTR-AAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVL-REAEK
        MA+SRRL L L+LGT IL CFLF   +A A  DYGDDIHTV+HP     CK E  D+GDQCREEND  EDDDFDDTYKIVNNIAVTLS+SG +L +E E+
Subjt:  MAVSRRLAL-LSLGTIILLCFLFTR-AAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVL-REAEK

Query:  SEDTPASEEELGNMFV
        SED P+SEEE+GN+ +
Subjt:  SEDTPASEEELGNMFV

KAG6570557.1 hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]8.5e-3570.69Show/hide
Query:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLREAEKSED
        MAVSRRLALLSLGT ILLC LFTRAA+A+SDYGDDIHTVRH      C  E+P +GDQCREEND VED+DFDDTYKIVNN+A+ LS+SGS LREAE+ +D
Subjt:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLREAEKSED

Query:  TPASEEELGNMFVLGH
         P  EEE+ N+ ++GH
Subjt:  TPASEEELGNMFVLGH

KAG6604744.1 hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]5.9e-2067.78Show/hide
Query:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKG-ERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLRE
        MAVSRRLAL SLGT ILLCFL TRAAVADSD+G ++H VR+     +  ++  QCR+END V DDDFDDTYKIVNNIA+TLS+SG +L+E
Subjt:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKG-ERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLRE

RXH90050.1 hypothetical protein DVH24_032407 [Malus domestica]1.1e-1048.25Show/hide
Query:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKGERPDQGDQCRE-ENDAVEDDDFDDTYKIVNNIAVTLSS-SGSVLREAEKSEDTPA
        MAVSRRL LL LGT++   FL  + A A  ++GD        C  + P+ GDQCRE E DAV DDD DDTYKIVN +AVTLS+ +G V  +A++  D   
Subjt:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKGERPDQGDQCRE-ENDAVEDDDFDDTYKIVNNIAVTLSS-SGSVLREAEKSEDTPA

Query:  SEE-ELGNMFVLGH
        +E+ E  ++ V+GH
Subjt:  SEE-ELGNMFVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ4 Uncharacterized protein3.1e-3067.23Show/hide
Query:  MAVSRRLAL-LSLGTIILLCFLFTR-AAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVL-REAEK
        MA+SRRL L L+LGT IL CFLF   +A A  DYGDDIHTV+HP     CK E  D+GDQCREEND  EDDDFDDTYKIVNNIAVTLS+SG +L +E E+
Subjt:  MAVSRRLAL-LSLGTIILLCFLFTR-AAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVL-REAEK

Query:  SEDTPASEEELGNMFVLGH
        SED P+SEEE+GN+ ++GH
Subjt:  SEDTPASEEELGNMFVLGH

A0A2N9FLD3 Uncharacterized protein3.8e-1245Show/hide
Query:  MAVSRRLALLSLGTIILLCFLFTRAAVAD-SDYGDDIHTVRHP---CKGERPDQGDQCREENDAVE--DDDFDDTYKIVNNIAVTLSSS--GSVLREAEK
        MA+SR + L  LGT +L+C L  + + AD SD+   IH ++H    C G  P+ GDQCR ++D  E  DDD DDTYK+VN ++V+ S+S   S   E   
Subjt:  MAVSRRLALLSLGTIILLCFLFTRAAVAD-SDYGDDIHTVRHP---CKGERPDQGDQCREENDAVE--DDDFDDTYKIVNNIAVTLSSS--GSVLREAEK

Query:  SEDTPASEEELGN-MFVLGH
          D  ++EEEL N M VLGH
Subjt:  SEDTPASEEELGN-MFVLGH

A0A2P5B771 Uncharacterized protein9.3e-1143.09Show/hide
Query:  MAVSRRLALL-SLGTIILLCFLFTRAAVADSDYGDDIHTVRH---PCKGE-RPDQGDQCREENDAVE---DDDFDDTYKIVNNIAVTLSSSGSVLREAEK
        MAVSR   +   LGT++++   F  AA AD  +  +IH VRH    CKG    ++GDQC++ +D  +   DDD DDTYKIVNN+ V+LSS+G  L  AE 
Subjt:  MAVSRRLALL-SLGTIILLCFLFTRAAVADSDYGDDIHTVRH---PCKGE-RPDQGDQCREENDAVE---DDDFDDTYKIVNNIAVTLSSSGSVLREAEK

Query:  SEDTPASEEELG----NMFVLGH
         +D  +SE ++      + VLGH
Subjt:  SEDTPASEEELG----NMFVLGH

A0A498J3I4 Uncharacterized protein5.4e-1148.25Show/hide
Query:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKGERPDQGDQCRE-ENDAVEDDDFDDTYKIVNNIAVTLSS-SGSVLREAEKSEDTPA
        MAVSRRL LL LGT++   FL  + A A  ++GD        C  + P+ GDQCRE E DAV DDD DDTYKIVN +AVTLS+ +G V  +A++  D   
Subjt:  MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKGERPDQGDQCRE-ENDAVEDDDFDDTYKIVNNIAVTLSS-SGSVLREAEKSEDTPA

Query:  SEE-ELGNMFVLGH
        +E+ E  ++ V+GH
Subjt:  SEE-ELGNMFVLGH

A0A5D3CVV2 Uncharacterized protein3.9e-3369.49Show/hide
Query:  MAVSRRLAL-LSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLR-EAEKS
        MA+SRRLAL LSLGT IL  FLFTR + A SDYG+DIHTVRHP     CK E  D+GDQCRE+ND  EDDDFDDTYKIVNNIA+TLS+SGS+L+ +AE+S
Subjt:  MAVSRRLAL-LSLGTIILLCFLFTRAAVADSDYGDDIHTVRHP-----CKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLR-EAEKS

Query:  EDTPASEEELGNMFVLGH
        +D P+SEEE+GNM ++GH
Subjt:  EDTPASEEELGNMFVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTCAAGACGACTGGCCCTTCTTTCCCTCGGAACAATAATCCTTCTCTGCTTCTTGTTCACCAGAGCCGCCGTCGCCGACTCCGACTACGGCGACGACATTCA
CACCGTCAGACACCCCTGCAAGGGCGAACGCCCCGACCAAGGCGACCAATGCAGAGAAGAAAACGACGCCGTTGAGGACGACGATTTCGATGACACATACAAGATCGTGA
ACAACATTGCCGTAACCCTATCGTCGTCCGGCAGTGTACTTCGGGAGGCGGAGAAATCGGAAGATACTCCGGCGTCGGAGGAAGAACTCGGCAACATGTTTGTACTGGGC
CACTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAACAAACAAACAAAACAAAACAGTATATATTTTACGCCCTTCAGTCCCATTAGCACCATTAAACTCCCAAACAAAAAAATCATCCGTACAAACAAACCCTAATCAT
GGCTGTTTCAAGACGACTGGCCCTTCTTTCCCTCGGAACAATAATCCTTCTCTGCTTCTTGTTCACCAGAGCCGCCGTCGCCGACTCCGACTACGGCGACGACATTCACA
CCGTCAGACACCCCTGCAAGGGCGAACGCCCCGACCAAGGCGACCAATGCAGAGAAGAAAACGACGCCGTTGAGGACGACGATTTCGATGACACATACAAGATCGTGAAC
AACATTGCCGTAACCCTATCGTCGTCCGGCAGTGTACTTCGGGAGGCGGAGAAATCGGAAGATACTCCGGCGTCGGAGGAAGAACTCGGCAACATGTTTGTACTGGGCCA
CTGAGCGCCGGCGAAACCACTCTGTTTTTTTTATTCTTGTTGATTTTACTTTTATGGCGTTGGAGAAAATTAAAGTTTAAATGTCTTTTTTTTTTAATTCGCAATTTATT
ATCGTCGTTCGTTTCTTTTTCTTCCGGCATAAGACATATGCACGCCGGTGGATCATCAGCATGCATTGAGTTAGTTAATCATTTTTAGACCGATA
Protein sequenceShow/hide protein sequence
MAVSRRLALLSLGTIILLCFLFTRAAVADSDYGDDIHTVRHPCKGERPDQGDQCREENDAVEDDDFDDTYKIVNNIAVTLSSSGSVLREAEKSEDTPASEEELGNMFVLG
H