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Tan0011827 (gene) of Snake gourd v1 genome

Gene IDTan0011827
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionextensin-like
Genome locationLG08:74911495..74911870
RNA-Seq ExpressionTan0011827
SyntenyTan0011827
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]3.2e-0562.75Show/hide
Query:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        KAR  LFLLL F+L+  +SARI PHS +  Q  T ++NDY+DPGANPRHDP
Subjt:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

XP_022948580.1 extensin-like isoform X1 [Cucurbita moschata]1.7e-0666.67Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        MEFK   CL L+ L S +LVSSARI   SVSGKQAT IVINDY+DPG NP   P
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

XP_022998671.1 extensin-like [Cucurbita maxima]3.4e-0768.52Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        MEFKAR CL  LL  S +LVSSA+I   SVSGKQAT IVINDY+DPG NP   P
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

XP_023525722.1 extensin-like isoform X1 [Cucurbita pepo subsp. pepo]8.4e-0664.81Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        MEFK   CL L+ L S  LV+SARI   SVSGKQAT IVINDY+DPG NP   P
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]1.3e-0669.23Show/hide
Query:  FKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        FKAR   FLLL  S +L++ ARITPHS S  Q  TI INDYADPGANPRHDP
Subjt:  FKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

TrEMBL top hitse value%identityAlignment
A0A0A0M0T8 Uncharacterized protein1.5e-0562.75Show/hide
Query:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        KAR  LFLLL F+L+  +SARI PHS +  Q  T ++NDY+DPGANPRHDP
Subjt:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

A0A5A7SPC6 Protein PSY37.7e-0564.71Show/hide
Query:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        KAR  LFLLL  S  LV+SARI PHS +  Q    +INDY DPGANPRHDP
Subjt:  KARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

A0A6J1G9M6 uncharacterized protein LOC111452214 isoform X15.9e-0552.56Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDPCRHVPATRSGRRPPCRHVPATRSG
        MEFKA  CL  LL  S +LVSSARI   SVSG Q   IVINDY D G NP H P   +P   S   PP +  P   SG
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDPCRHVPATRSGRRPPCRHVPATRSG

A0A6J1GAA0 extensin-like isoform X18.2e-0766.67Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        MEFK   CL L+ L S +LVSSARI   SVSGKQAT IVINDY+DPG NP   P
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

A0A6J1KAU3 extensin-like1.7e-0768.52Show/hide
Query:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP
        MEFKAR CL  LL  S +LVSSA+I   SVSGKQAT IVINDY+DPG NP   P
Subjt:  MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTAAAGCTCGTTTTTGCCTCTTTCTCTTGCTCTTGTTCTCGCTTTCTCTCGTCAGCTCGGCTCGGATCACACCCCATTCAGTTTCAGGAAAGCAAGCAACAAC
AATTGTGATAAACGACTACGCAGATCCTGGTGCTAATCCAAGACATGATCCATGTCGCCACGTACCTGCGACGCGGAGCGGCCGACGTCCTCCATGTCGCCACGTACCTG
CGACGCGGAGCGGCCGACGTCCTCGAAAAATGGATATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTAAAGCTCGTTTTTGCCTCTTTCTCTTGCTCTTGTTCTCGCTTTCTCTCGTCAGCTCGGCTCGGATCACACCCCATTCAGTTTCAGGAAAGCAAGCAACAAC
AATTGTGATAAACGACTACGCAGATCCTGGTGCTAATCCAAGACATGATCCATGTCGCCACGTACCTGCGACGCGGAGCGGCCGACGTCCTCCATGTCGCCACGTACCTG
CGACGCGGAGCGGCCGACGTCCTCGAAAAATGGATATTTAA
Protein sequenceShow/hide protein sequence
MEFKARFCLFLLLLFSLSLVSSARITPHSVSGKQATTIVINDYADPGANPRHDPCRHVPATRSGRRPPCRHVPATRSGRRPRKMDI