; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011848 (gene) of Snake gourd v1 genome

Gene IDTan0011848
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionYrdC-like domain-containing protein
Genome locationLG01:36495547..36510987
RNA-Seq ExpressionTan0011848
SyntenyTan0011848
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607198.1 YrdC domain-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.2e-14393.93Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KMVE  S+IRTFATFPSS LGAP+YG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSGQPSSV VNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]1.3e-14394.29Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KMVE  S+IRTFATFPSS LGAP+YG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSGQPSSVCV+DFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]5.7e-14494.29Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNT P KMVE  SLIRTFATFPSS LGAPNYG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSG+PSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRG FKIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]8.8e-14594.64Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KMVE  SLIRTFATFPSS LGAPNYG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATL+RYSLLE+A S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]2.4e-14291.81Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MN LP KMVES SLIRTF TFPSSHLG+PNYGLVSFL +NRGSR++FPKTTWSLEKC MRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAV+RIYEIKGRKLTSPLAICVGDVSDITRFAVTDH P GLLDSLLPGPVTVVLKRGE+SILEKSLNPGL+SIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLT+RGT+KI+RAGSAKEQTVA LERYSLLEEA SI
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein6.6e-13888.61Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KM +S SLIRTF TFPSS LG+ NYG+VSFL RNRGSR++F KT WSLEKC MRVEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVGDVSDITRFAVTDH P GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLT++GTFKIIRAGSA+EQT+ATLERYSLLE A +I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial1.2e-13687.19Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KM +S SLIRTFATFPSSHLG+ NYG+VSFL RNRGSR++F KT WSLEKC M VEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+TDH P GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTI+DLT+RGTFKIIRAGSA++QT+ATL+RYSLLE A +I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI

A0A5A7T5W1 YrdC domain-containing protein1.2e-13687.19Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KM +S SLIRTFATFPSSHLG+ NYG+VSFL RNRGSR++F KT WSLEKC M VEN LQALRPASEAFAQEAT+ALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVG VSDITR+A+TDH P GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSETAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI
        ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTI+DLT+RGTFKIIRAGSA++QT+ATL+RYSLLE A +I
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial6.1e-14494.29Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNTLP KMVE  S+IRTFATFPSS LGAP+YG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEA EALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSGQPSSVCV+DFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial2.8e-14494.29Show/hide
Query:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
        MNT P KMVE  SLIRTFATFPSS LGAPNYG VSFLH NRGSRLNFPKT WSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA
Subjt:  MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL
        CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAV DH P GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRS TAL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETAL

Query:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS
        ALTSANLSG+PSSVCVNDFENLWQHCAYVYDGG+LPAGRAGSTIIDLTKRG FKIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  ALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATS

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial4.4e-4649.01Show/hide
Query:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A  SEA+  +Y +KGR  T PLA+C+G V+D+ R+      P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V +F++LW H + + DGG +     P  R GST++DL+  G F IIR G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYS

Query:  LL
        LL
Subjt:  LL

Q3U5F4 YrdC domain-containing protein, mitochondrial5.9e-4347.29Show/hide
Query:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A SS A++ +Y +KGR    PLA+C+G V+D+ R+      P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATL-ERY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATL-ERY

Query:  SLL
         LL
Subjt:  SLL

Q499R4 YrdC domain-containing protein, mitochondrial7.7e-4347.29Show/hide
Query:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A  S A++ +Y +KGR    PLA+C+G V+D+ R+      P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLE-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V +F++LW H + V DGG +     P  R GST++DL+  G F IIR+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLE-RY

Query:  SLL
         LL
Subjt:  SLL

Q60369 Putative threonylcarbamoyl-AMP synthase1.8e-2033.52Show/hide
Query:  MRVENSLQALRPASEAFAQEATEALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPG
        M ++N +  +   +E   ++  E LK     GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D ++I ++A  +     ++D  LPG
Subjt:  MRVENSLQALRPASEAFAQEATEALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPG

Query:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGG
        P+T++LK+  G   I+ K      + IG+R+PD   IR +   S   L  TSAN+SG+ S   V++ +  + +   YV D G
Subjt:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE-NLWQHCAYVYDGG

Q86U90 YrdC domain-containing protein, mitochondrial2.6e-4345.13Show/hide
Query:  SLQALRPASEAFAQ---EATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVL
        ++QA  P    + +    A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V+D+ R+      P GLL  LLPGPVT+V+
Subjt:  SLQALRPASEAFAQ---EATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVL

Query:  KRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKI
        +R E   L K LNP    +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V +F++LW   + V DGG +     P  R GST++DL+  G F I
Subjt:  KRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYDGGIL-----PAGRAGSTIIDLTKRGTFKI

Query:  IRAGSAKEQTVATL-ERYSLLEEATS
        IR G A E T A L ++Y LL    S
Subjt:  IRAGSAKEQTVATL-ERYSLLEEATS

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain4.7e-1129.95Show/hide
Query:  QEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPG----------LLDSLLPGPVTVVLKRGESS
        Q   + LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  F  T  FP G           +   LPGP T +L      
Subjt:  QEATEALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPG----------LLDSLLPGPVTVVLKRGESS

Query:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGILPAGRAGSTIIDLTKRGTF
        + ++ +  G  S        +GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +   +V DGGI  A    STI+D+T  G +
Subjt:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLW-----QHCAYVYDGGILPAGRAGSTIIDLTKRGTF

Query:  -KIIRAG
         K+IR G
Subjt:  -KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain8.2e-4055.62Show/hide
Query:  LPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNF-PKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACD
        L  ++ E    I    + P    G       S  +++R  R     K  WSLE+    V +    + PA+EA+AQEA EA+K+ KVIAVPTDTLYG ACD
Subjt:  LPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNF-PKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACD

Query:  ACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKR
        ACS EAV+RIYEIKGRKLTSPLAICVGDV DI R A T H P GLLDSLLPGPVT+VL+R
Subjt:  ACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain2.4e-9264.36Show/hide
Query:  LPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNF-PKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACD
        L  ++ E    I    + P    G       S  +++R  R     K  WSLE+    V +    + PA+EA+AQEA EA+K+ KVIAVPTDTLYG ACD
Subjt:  LPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNF-PKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACD

Query:  ACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALAL
        ACS EAV+RIYEIKGRKLTSPLAICVGDV DI R A T H P GLLDSLLPGPVT+VL+RGESSILEKSLNPG+ +IGVRVPD +FIR +SR S + LAL
Subjt:  ACSSEAVNRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALAL

Query:  TSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEE
        TSANLSG  SSVCV DFENLWQHCAYVYDGG+LP+GRAGSTI+DLTK G +KIIR GSAK+ TVA LE+Y L EE
Subjt:  TSANLSGQPSSVCVNDFENLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACACTTCCGCCAAAAATGGTTGAGAGTTTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTAGGTGCTCCCAATTATGGGCTAGTTTCGTTCTT
GCATCGAAATAGAGGATCAAGGTTGAATTTTCCTAAAACGACATGGAGTTTGGAAAAATGTAGTATGCGTGTGGAGAACAGTTTGCAAGCTCTTCGCCCTGCCTCCGAAG
CTTTTGCTCAAGAGGCTACTGAAGCTCTCAAAGCTGGAAAGGTTATTGCAGTCCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGTTCTTCTGAAGCAGTTAAT
AGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTTGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTTCCTCCTGGGTT
GCTTGATTCTCTCCTTCCAGGACCTGTAACTGTTGTACTAAAAAGAGGAGAGTCAAGTATTCTTGAGAAGTCTCTGAACCCTGGTTTGGAGAGTATAGGAGTCCGTGTAC
CTGACGCTGACTTCATTCGGCTTATTTCCCGTAGATCAGAGACCGCATTGGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGTAGTGTCTGTGTTAATGATTTTGAA
AACCTATGGCAACACTGTGCTTATGTATATGATGGTGGCATTCTTCCTGCTGGACGAGCAGGTTCTACAATTATCGACCTCACCAAGCGAGGGACATTTAAGATTATCAG
AGCTGGAAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTGTTAGAAGAAGCAACTAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
AAGTTTCTTACTTTCTTTTAAACACAGGGTGTTCTCTGCCTGCAAAAACCCGCTTCTTGGTGACGACGGTTGGAACTAGGGCTCAAGTTGACTCGCTACAGACCACAATG
AACACACTTCCGCCAAAAATGGTTGAGAGTTTCTCTCTAATCAGAACGTTTGCAACTTTTCCCTCTTCTCACCTAGGTGCTCCCAATTATGGGCTAGTTTCGTTCTTGCA
TCGAAATAGAGGATCAAGGTTGAATTTTCCTAAAACGACATGGAGTTTGGAAAAATGTAGTATGCGTGTGGAGAACAGTTTGCAAGCTCTTCGCCCTGCCTCCGAAGCTT
TTGCTCAAGAGGCTACTGAAGCTCTCAAAGCTGGAAAGGTTATTGCAGTCCCCACTGATACTCTCTACGGACTCGCTTGTGATGCTTGTTCTTCTGAAGCAGTTAATAGG
ATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTTGCCATTTGTGTTGGTGATGTCTCTGACATAACTCGCTTTGCTGTAACAGACCATTTTCCTCCTGGGTTGCT
TGATTCTCTCCTTCCAGGACCTGTAACTGTTGTACTAAAAAGAGGAGAGTCAAGTATTCTTGAGAAGTCTCTGAACCCTGGTTTGGAGAGTATAGGAGTCCGTGTACCTG
ACGCTGACTTCATTCGGCTTATTTCCCGTAGATCAGAGACCGCATTGGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGTAGTGTCTGTGTTAATGATTTTGAAAAC
CTATGGCAACACTGTGCTTATGTATATGATGGTGGCATTCTTCCTGCTGGACGAGCAGGTTCTACAATTATCGACCTCACCAAGCGAGGGACATTTAAGATTATCAGAGC
TGGAAGTGCAAAGGAGCAGACTGTTGCAACACTTGAAAGGTATTCACTGTTAGAAGAAGCAACTAGTATTTGAGCATTAGAATCTTGTCAAGTTCCCAAACATCTTTTAA
TTATTTTAGATAGAGGGGTTGCAAAGAATTTTTTTAGGCCGAGTAAAAGTAGATCAATTCTTATGGGATTAACATTTCATTTCTAACAACTATATTGCCTTTTGTCTCTA
AAGTTCTTGCTTTTATTTGTATGATTATGTAACATTTGAATTATTCATCAAATACTACTATATATACTGTATTATGAG
Protein sequenceShow/hide protein sequence
MNTLPPKMVESFSLIRTFATFPSSHLGAPNYGLVSFLHRNRGSRLNFPKTTWSLEKCSMRVENSLQALRPASEAFAQEATEALKAGKVIAVPTDTLYGLACDACSSEAVN
RIYEIKGRKLTSPLAICVGDVSDITRFAVTDHFPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFE
NLWQHCAYVYDGGILPAGRAGSTIIDLTKRGTFKIIRAGSAKEQTVATLERYSLLEEATSI