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Tan0011879 (gene) of Snake gourd v1 genome

Gene IDTan0011879
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription factor GTE9 isoform X4
Genome locationLG06:1867060..1867626
RNA-Seq ExpressionTan0011879
SyntenyTan0011879
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061663.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]8.5e-1171.15Show/hide
Query:  TTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
        +TEE+R+AAR ALE++E SV++EDSHKSVKDLERLCGWPI Y GGF N   Y
Subjt:  TTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
KAG6571342.1 hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]8.0e-0936.93Show/hide
Query:  MKELPRR---VNVGDLENLAGKTRRSKEITT-----TAESATIVATPWTPPSMSGDSERVTILKSRYADTIMKAQRQLF-----------GEAAG-----
        MK +P+    V    L++ A K   S   T+     T    TIV  P TP S SG+  R  ILK ++A TI KAQR L             EA G     
Subjt:  MKELPRR---VNVGDLENLAGKTRRSKEITT-----TAESATIVATPWTPPSMSGDSERVTILKSRYADTIMKAQRQLF-----------GEAAG-----

Query:  -------------------TKQKQTTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
                           T  K   EE+R AAR  LE+VE  V V+DSH S+++ ERLCG+PI Y GGF N   Y
Subjt:  -------------------TKQKQTTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
TrEMBL top hitse value%identityAlignment
A0A0A0KGL2 Uncharacterized protein3.5e-1048.04Show/hide
Query:  SATIVATPWTPPSMSGDSERVTILKSRYADTIMKAQRQLFGEAAGTKQKQTTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSA
        +AT  AT  T P+ + + E    +  R     MK           T    +TEE+RRAAR+ALE +E SV+VEDSHKSVKDLERLCGWPI   GGF N  
Subjt:  SATIVATPWTPPSMSGDSERVTILKSRYADTIMKAQRQLFGEAAGTKQKQTTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSA

Query:  LY
         Y
Subjt:  LY
A0A5D3DC97 Transcription factor GTE9 isoform X44.1e-1171.15Show/hide
Query:  TTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
        +TEE+R+AAR ALE++E SV++EDSHKSVKDLERLCGWPI Y GGF N   Y
Subjt:  TTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGCTTTAAGGAAAGTGAATTCTTCGAAGACGAGTAGCCTTGTTTGCGAAAGATTAGCGAAGGCGCCGAGGATATTGATGAAAGAGAGTTCGGCAAAAACTCGGCG
AGTTGCTGGTTTGGCAGTACCGAAGAAGAAGAAGGAGGCGAGTTCTCCTCCGATTATGAAAGAATTACCTCGGCGAGTTAATGTCGGCGATTTGGAAAATTTGGCGGGAA
AGACGAGGAGGAGCAAGGAAATTACTACTACGGCGGAATCGGCGACGATCGTAGCAACACCGTGGACTCCGCCGTCAATGAGCGGAGATTCTGAGCGAGTAACAATACTG
AAGAGTAGGTATGCGGATACGATAATGAAAGCACAGCGGCAACTTTTCGGCGAGGCTGCCGGAACGAAACAGAAACAAACGACGGAGGAACTGAGACGAGCGGCTCGAGA
AGCTTTGGAGAAGGTGGAGTGGAGCGTTGAAGTGGAGGATAGCCATAAATCGGTGAAGGATTTGGAGCGGCTCTGTGGTTGGCCGATATCCTACCATGGCGGATTTTTTA
ACAGCGCTTTGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGCTTTAAGGAAAGTGAATTCTTCGAAGACGAGTAGCCTTGTTTGCGAAAGATTAGCGAAGGCGCCGAGGATATTGATGAAAGAGAGTTCGGCAAAAACTCGGCG
AGTTGCTGGTTTGGCAGTACCGAAGAAGAAGAAGGAGGCGAGTTCTCCTCCGATTATGAAAGAATTACCTCGGCGAGTTAATGTCGGCGATTTGGAAAATTTGGCGGGAA
AGACGAGGAGGAGCAAGGAAATTACTACTACGGCGGAATCGGCGACGATCGTAGCAACACCGTGGACTCCGCCGTCAATGAGCGGAGATTCTGAGCGAGTAACAATACTG
AAGAGTAGGTATGCGGATACGATAATGAAAGCACAGCGGCAACTTTTCGGCGAGGCTGCCGGAACGAAACAGAAACAAACGACGGAGGAACTGAGACGAGCGGCTCGAGA
AGCTTTGGAGAAGGTGGAGTGGAGCGTTGAAGTGGAGGATAGCCATAAATCGGTGAAGGATTTGGAGCGGCTCTGTGGTTGGCCGATATCCTACCATGGCGGATTTTTTA
ACAGCGCTTTGTATTAG
Protein sequenceShow/hide protein sequence
MKALRKVNSSKTSSLVCERLAKAPRILMKESSAKTRRVAGLAVPKKKKEASSPPIMKELPRRVNVGDLENLAGKTRRSKEITTTAESATIVATPWTPPSMSGDSERVTIL
KSRYADTIMKAQRQLFGEAAGTKQKQTTEELRRAAREALEKVEWSVEVEDSHKSVKDLERLCGWPISYHGGFFNSALY