CuGenDBv2

Gene ID	Tan0011895
Organism	Trichosanthes anguina (Snake gourd v1)
Description	2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X2
Genome location	LG03:80867263..80869567
RNA-Seq Expression	Tan0011895
Synteny	Tan0011895
Gene Ontology terms	GO:0006631 - fatty acid metabolic process (biological process) GO:0042372 - phylloquinone biosynthetic process (biological process) GO:0005777 - peroxisome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0031956 - medium-chain fatty acid-CoA ligase activity (molecular function)
InterPro domains	IPR025110 - AMP-binding enzyme, C-terminal domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134568.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X5 [Cucumis sativus]

6.2e-47

78.07

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVV+GIPDSRLTEK V C+QL+E+WQWYE NHELL GK+KQHLSS ILR+HC +CNLTGFK+PKEFIKWGKPFPVT++GK KRDA+R
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI   +LL STL
Subjt:  KEVICLFQLLHSTL

XP_008439548.1 PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X2 [Cucumis melo]

5.6e-48

80.7

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+++WQWYE NHELL GK+KQH+SS ILR+HC +CNLTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI   +LL STL
Subjt:  KEVICLFQLLHSTL

XP_038882140.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X4 [Benincasa hispida]

7.8e-50

84.21

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+E+WQWYE NHEL H K+KQHLSSEIL KHCKEC LTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI  F+LL STL
Subjt:  KEVICLFQLLHSTL

XP_038882141.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X5 [Benincasa hispida]

7.8e-50

84.21

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+E+WQWYE NHEL H K+KQHLSSEIL KHCKEC LTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI  F+LL STL
Subjt:  KEVICLFQLLHSTL

XP_038882142.1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X6 [Benincasa hispida]

7.8e-50

84.21

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+E+WQWYE NHEL H K+KQHLSSEIL KHCKEC LTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI  F+LL STL
Subjt:  KEVICLFQLLHSTL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYL3 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X2

2.7e-48

80.7

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+++WQWYE NHELL GK+KQH+SS ILR+HC +CNLTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI   +LL STL
Subjt:  KEVICLFQLLHSTL

A0A5A7UDB3 2-succinylbenzoate--CoA ligase

9.6e-46

81.73

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+++WQWYE NHELL GK+KQH+SS ILR+HC +CNLTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVI
         E++
Subjt:  KEVI

A0A5D3CSF4 2-succinylbenzoate--CoA ligase

9.6e-46

81.73

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK CVVVGIPDSRLTEKAV C+QL+++WQWYE NHELL GK+KQH+SS ILR+HC +CNLTGFK+PKEFIKWGKPFPVTT+GKLKRDAVR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVI
         E++
Subjt:  KEVI

A0A6J1EDP2 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X3

6.2e-45

77.19

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VERILLQHPGVK C VV IPDSRLTEKAV C+QL+E+WQW+E + ELL GK+KQHL + ILRKHC +CNLTGFKIPKEF KWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI  F LL STL
Subjt:  KEVICLFQLLHSTL

A0A6J1ISN9 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal isoform X4

2.5e-46

78.95

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        V+RILLQHPGVK C VVGIPDSRLTEKAV C+QL+E+WQW+E + ELL GK+K HLS+ ILRKHCK+CNLTGFKIPKEFIKWGKPFPVTT GKLKRDA+R
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
         EVI  F LL STL
Subjt:  KEVICLFQLLHSTL

SwissProt top hits

e value

%identity

Alignment

O07619 Uncharacterized acyl--CoA ligase YhfT

8.7e-04

31.68

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        +ER+LL  P V+   VVGIPD    E AV  I    N                    +  L+  CK+  L  +KIPK+++ +    P T+ GK+ R  V+
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  K
        K
Subjt:  K

Q8VYJ1 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal

1.6e-26

48.25

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Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VE +L++HPG+   VV+G+ D+RL E  V C++L+E W W     ++ + K    LSSE L+ HC+  NLTGFKIPK F++W K FP+TT GK+KRD VR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
        ++V+  FQ++ S+L
Subjt:  KEVICLFQLLHSTL

Arabidopsis top hits

e value

%identity

Alignment

AT1G30520.1 acyl-activating enzyme 14

1.2e-27

48.25

Show/hide

Query:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR
        VE +L++HPG+   VV+G+ D+RL E  V C++L+E W W     ++ + K    LSSE L+ HC+  NLTGFKIPK F++W K FP+TT GK+KRD VR
Subjt:  VERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVR

Query:  KEVICLFQLLHSTL
        ++V+  FQ++ S+L
Subjt:  KEVICLFQLLHSTL

Sequences

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CDS sequence

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ATGCCTCCTAAGAAGCCAGTGGAGAGAATTCTATTGCAACATCCGGGAGTTAAATGCTGTGTTGTGGTGGGCATTCCTGATTCTCGTTTGACAGAGAAGGCTGTAGGTTG
TATTCAATTGAAAGAGAACTGGCAGTGGTATGAAAACAATCATGAACTTCTTCATGGAAAGATGAAGCAACATTTATCTAGTGAAATTCTTCGTAAACATTGCAAGGAGT
GTAACTTAACTGGGTTCAAAATACCAAAGGAGTTTATCAAGTGGGGGAAGCCATTTCCAGTCACTACGATAGGAAAATTGAAAAGAGACGCAGTTCGAAAGGAGGTAATA
TGTCTGTTTCAATTACTGCATAGCACTCTTTGA

mRNA sequence

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Protein sequence

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MPPKKPVERILLQHPGVKCCVVVGIPDSRLTEKAVGCIQLKENWQWYENNHELLHGKMKQHLSSEILRKHCKECNLTGFKIPKEFIKWGKPFPVTTIGKLKRDAVRKEVI
CLFQLLHSTL

Tan0011895 (gene) of Snake gourd v1 genome