; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011909 (gene) of Snake gourd v1 genome

Gene IDTan0011909
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein
Genome locationLG11:6434783..6436620
RNA-Seq ExpressionTan0011909
SyntenyTan0011909
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR011043 - Galactose oxidase/kelch, beta-propeller
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039382.1 F-box protein [Cucumis melo var. makuwa]9.3e-4850.72Show/hide
Query:  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRY
        +V DY P     +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+NEF+++P   +E +++  G GFS +TK+Y
Subjt:  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRY

Query:  KLARVD----SGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFN
        KL R +       +    IM IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E IA LE+G   K   I+ F 
Subjt:  KLARVD----SGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFN

Query:  GTIYAII
          +YAII
Subjt:  GTIYAII

XP_004141601.1 F-box protein At3g07870 [Cucumis sativus]1.9e-4050.98Show/hide
Query:  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMSNEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRR
        CN K+HCID+DTMS VGSFGF+ D ++  +SI +S + LL ISK I     C GILNPM+NEF++LP     E+  Y+G GF+ KTK+YKL RV +  R 
Subjt:  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMSNEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRR

Query:  NFSSIMHIFTFG-RSGT-NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQSFNGTIYAIIFVY
         F SIM I  FG RS T  +W+H    P +  +HGAY NGVIYW+GKEK K   +VIY LDVETE++EL+A LEVG  +     +I + N ++YA + + 
Subjt:  NFSSIMHIFTFG-RSGT-NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQSFNGTIYAIIFVY

Query:  TPCC
         PCC
Subjt:  TPCC

XP_008459707.1 PREDICTED: F-box protein At3g07870-like [Cucumis melo]3.6e-4751.28Show/hide
Query:  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SG
        +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+NEF+++P   +E +++  G GFS +TK+YKL R +      
Subjt:  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SG

Query:  RRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFNGTIYAII
         +    IM IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E  A LE+G + K   I+ F   +YAII
Subjt:  RRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFNGTIYAII

XP_038879760.1 uncharacterized protein LOC120071509 [Benincasa hispida]1.2e-4248.13Show/hide
Query:  NPKMHC-----IDVDT-MSF----VGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARV
        NPKMHC     +DVD+ M F      S  FDGDWS+I    S NGLL ISK  +  SC GI NPM+NEF ++P    + N Y +G GF   TK YKL R+
Subjt:  NPKMHC-----IDVDT-MSF----VGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARV

Query:  D-SGRRNFSSIMHIFTFGRSG--------TNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQS
              ++SS M + TFGR G         NQW+H+ S+P  +   GAYFNG+IYW+G+EK+++N++VIY LDVE+EKI+L AVL+VG  S   K +IQ 
Subjt:  D-SGRRNFSSIMHIFTFGRSG--------TNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQS

Query:  FNGTIYAIIFVYTP
        FNG++YAI  +  P
Subjt:  FNGTIYAIIFVYTP

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]2.2e-4147.25Show/hide
Query:  NPKMHCIDVDTMSFV-------------GSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLEN-IYYFGSGFSLKTKRYKL
        N KMHCI  DT   +              S  FDG+W++++I N  +GLL I K    T C GI NPM+NEF+++P   L+N IYYFG GF+  TK+YKL
Subjt:  NPKMHCIDVDTMSFV-------------GSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLEN-IYYFGSGFSLKTKRYKL

Query:  ARV-DSGRRN----FSSIMHIFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEV----GSASKE
         RV DS  RN      SIM + TF RSGT    NQW+++  LP  ++++GAY NG IYWIGKE+EKEN++ IY LDVETEKIEL  VLE+     ++   
Subjt:  ARV-DSGRRN----FSSIMHIFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEV----GSASKE

Query:  FIQSFNGTIYAIIFVYTP
         +Q FN ++YAI  +  P
Subjt:  FIQSFNGTIYAIIFVYTP

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ1 FBA_3 domain-containing protein9.1e-4150.98Show/hide
Query:  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMSNEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRR
        CN K+HCID+DTMS VGSFGF+ D ++  +SI +S + LL ISK I     C GILNPM+NEF++LP     E+  Y+G GF+ KTK+YKL RV +  R 
Subjt:  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMSNEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRR

Query:  NFSSIMHIFTFG-RSGT-NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQSFNGTIYAIIFVY
         F SIM I  FG RS T  +W+H    P +  +HGAY NGVIYW+GKEK K   +VIY LDVETE++EL+A LEVG  +     +I + N ++YA + + 
Subjt:  NFSSIMHIFTFG-RSGT-NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS---KEFIQSFNGTIYAIIFVY

Query:  TPCC
         PCC
Subjt:  TPCC

A0A0A0LWG1 F-box domain-containing protein2.7e-4044.49Show/hide
Query:  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVGSFG--------------FDGDWSY-ISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKL-PGSVLENI
        ++   D G  +  CNPKMHCI++DT      F               FDGDW+Y I +A S NGL+ ISK    T C GI NPM+NEF+++      ++ 
Subjt:  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVGSFG--------------FDGDWSY-ISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKL-PGSVLENI

Query:  YYFGSGFSLKTKRYKLARV-DSG---RRNFSSI-----MHIFTFGRSGT-------NQWKHVDSLPFAVYNHGAYFNGVIYWIGKE--KEKENKFVIYGL
        Y +G GFS  TK+YKL RV D G   RR  S++     M + TFGRSGT       NQW+ + +LPF +   G Y NG+IYW+ KE  K+KE K+VIY L
Subjt:  YYFGSGFSLKTKRYKLARV-DSG---RRNFSSI-----MHIFTFGRSGT-------NQWKHVDSLPFAVYNHGAYFNGVIYWIGKE--KEKENKFVIYGL

Query:  DVETEKIELIAVLEVGSASKEFIQSFNGTIYAIIFV
        DVETE IE+  VL+V S     I  FNGTIYA   +
Subjt:  DVETEKIELIAVLEVGSASKEFIQSFNGTIYAIIFV

A0A1S3CB99 F-box protein At3g07870-like1.7e-4751.28Show/hide
Query:  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SG
        +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+NEF+++P   +E +++  G GFS +TK+YKL R +      
Subjt:  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SG

Query:  RRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFNGTIYAII
         +    IM IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E  A LE+G + K   I+ F   +YAII
Subjt:  RRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFNGTIYAII

A0A5A7T7C6 F-box protein4.5e-4850.72Show/hide
Query:  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRY
        +V DY P     +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+NEF+++P   +E +++  G GFS +TK+Y
Subjt:  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRY

Query:  KLARVD----SGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFN
        KL R +       +    IM IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E IA LE+G   K   I+ F 
Subjt:  KLARVD----SGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKE-FIQSFN

Query:  GTIYAII
          +YAII
Subjt:  GTIYAII

A0A5D3DMB7 F-box protein6.5e-3940.71Show/hide
Query:  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVG---------------SFGFDGDWSYISIA-NSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-N
        ++   D GP +   NPKM+CI  DT   +                S  FDGDWS+I +  NS NGL+FI K  + +   GI NPM+NEF+++P   L+ +
Subjt:  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVG---------------SFGFDGDWSYISIA-NSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-N

Query:  IYYFGSGFSLKTKRYKLARVDSGRRNFSSIMHIFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVL
         Y++G GFS  TK+YK+ RV+    N SSIM+I TF RS T    NQW+ + SLP  +   G Y NG IYW+G+++ KEN++ IY L+VETE+IEL AVL
Subjt:  IYYFGSGFSLKTKRYKLARVDSGRRNFSSIMHIFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVL

Query:  EVGSASKEFI-----QSFNGTIYAIIFVYTPCC-------RIQSVDDAIETFM
         +G  S   I     + FNG++YA  ++    C       R+Q  D  I+ F+
Subjt:  EVGSASKEFI-----QSFNGTIYAIIFVYTPCC-------RIQSVDDAIETFM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02660.1 F-box associated ubiquitination effector family protein5.2e-0429.73Show/hide
Query:  DWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLENIYYFGSGFSLKTKRYKLARV----DSGRRNFSSIMHIFTFGRSGTNQWKHVD-
        D  Y SI  +S GL++I    Y  +   I NP +  ++ LP        Y   GF    K+YK   +    D GR        I T G  G   W+ +  
Subjt:  DWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLENIYYFGSGFSLKTKRYKLARV----DSGRRNFSSIMHIFTFGRSGTNQWKHVD-

Query:  SLPF-AVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAV
         +P   +   G   NGV+Y++ +  E E+ +VI   DV +EK   I V
Subjt:  SLPF-AVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCCCGGAATCTCTCGGAGATTTCTCGAAACTGGAAATCGAAGAAGCATTGTTAATGGAGAAGCTGGAATGTAAGAGGATTATGAACATGAACATAGATTGGGGGCT
TCCATTTCCACGGCATATTGTTCAGGTCCCCGATTACGGTCCTAGACATTATTATTGCAATCCCAAGATGCATTGTATCGATGTTGATACGATGAGTTTTGTTGGCTCAT
TTGGATTTGATGGTGATTGGTCCTATATCTCAATTGCCAATTCCTCCAATGGCCTTCTCTTTATTTCCAAAGGTATTTATGGCACTTCTTGTTCTGGCATATTAAATCCT
ATGAGTAATGAGTTCATCAAACTTCCTGGATCTGTATTAGAAAATATTTACTACTTCGGAAGTGGTTTCAGCCTTAAGACAAAGCGATACAAATTGGCCAGAGTTGACTC
TGGCCGAAGAAATTTCAGTTCCATAATGCACATTTTCACATTTGGTAGAAGTGGAACCAACCAATGGAAGCATGTTGACTCCCTGCCATTTGCCGTCTACAATCATGGTG
CTTACTTCAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGAAAAGGAAAACAAGTTTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATTGATTGCAGTC
TTGGAAGTTGGCTCCGCCTCCAAGGAGTTTATTCAATCATTTAATGGCACCATTTATGCAATTATTTTCGTATACACTCCTTGTTGTAGGATTCAAAGTGTGGATGATGC
AATCGAGACATTCATGGATTAG
mRNA sequenceShow/hide mRNA sequence
CAAGCCCCTATATTTTTTTCTCTCAATTTATTATTTCCAAGCCCTAATTTTTCAGGGGAGGGGAATTTTCCAGTTCTGAAGTGAGAAGTCCTCGGCTCGTCCTCTCTTGC
TCTGATCGGCGGTCACTAACCTCTCGCCGCTGATCACCATGCCCCCGGAATCTCTCGGAGATTTCTCGAAACTGGAAATCGAAGAAGCATTGTTAATGGAGAAGCTGGAA
TGTAAGAGGATTATGAACATGAACATAGATTGGGGGCTTCCATTTCCACGGCATATTGTTCAGGTCCCCGATTACGGTCCTAGACATTATTATTGCAATCCCAAGATGCA
TTGTATCGATGTTGATACGATGAGTTTTGTTGGCTCATTTGGATTTGATGGTGATTGGTCCTATATCTCAATTGCCAATTCCTCCAATGGCCTTCTCTTTATTTCCAAAG
GTATTTATGGCACTTCTTGTTCTGGCATATTAAATCCTATGAGTAATGAGTTCATCAAACTTCCTGGATCTGTATTAGAAAATATTTACTACTTCGGAAGTGGTTTCAGC
CTTAAGACAAAGCGATACAAATTGGCCAGAGTTGACTCTGGCCGAAGAAATTTCAGTTCCATAATGCACATTTTCACATTTGGTAGAAGTGGAACCAACCAATGGAAGCA
TGTTGACTCCCTGCCATTTGCCGTCTACAATCATGGTGCTTACTTCAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGAAAAGGAAAACAAGTTTGTCATATATGGTC
TTGATGTTGAAACTGAGAAGATTGAATTGATTGCAGTCTTGGAAGTTGGCTCCGCCTCCAAGGAGTTTATTCAATCATTTAATGGCACCATTTATGCAATTATTTTCGTA
TACACTCCTTGTTGTAGGATTCAAAGTGTGGATGATGCAATCGAGACATTCATGGATTAGAAAATTTGTTATTGATGACATACCAAATAATTGGTCCCATCGATACTTTC
ACCTCATTAAAGCCTTTGAAGAGGGAGAGATATTGGTTCTGGTCAATAATGAGTTTTTTCGCTTGGATAAGACTAGAAGGAAGATCAAGATAAAAACTTTGAATCGAAAT
GAGAGAGAAGTTACTACAGGGGTTTGTCATATAGAATCTTGAATTTTGGGTTTCTCTCAAACATTTTGGCTGGAGACGATGAACCTTTTTTTAATTTTATTTAAGATGAG
AAGATGAATGGTTCATTTACATCAGAACCCACCCCATGGATAGATTGGCCTGCTGACTTATAATTTATAAGTTGTCCTTTGTTTATGAACTTTAAAAGTTGAAGGATCAA
ACTTATAATTTAATGGTGGTGATGGATTTGCAGGGATCCTCACCAAGTGGGAAAAGCACGAAAATGGTGTCGTGGTGAAGAAGGGTGGAAGAAGTGCTTGGAGATGAATG
TATAAGAGCAAGATGTGTGTAAGAGCTGAAGGAGAAGATTAAGAGAAGCTCAGAAGTAGGTGGGAGTTCTTCAAACAATTTTGAGAATTTCATTGAATGGCTTAGAATAA
GAGGAAGTTGCTGTAGGAAATGAAGCTTAGCTCAGATTTTGATCTCACATAAAGGGAGCAAATTAAAATTTTCTTCTTCTTAAGTTGAGCATTTATGGTCCATTTGATAA
AGTTTCATCTATTCCATTTTTTTAAGAATAAGAAACAAGAGTATGGGTGA
Protein sequenceShow/hide protein sequence
MPPESLGDFSKLEIEEALLMEKLECKRIMNMNIDWGLPFPRHIVQVPDYGPRHYYCNPKMHCIDVDTMSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNP
MSNEFIKLPGSVLENIYYFGSGFSLKTKRYKLARVDSGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAV
LEVGSASKEFIQSFNGTIYAIIFVYTPCCRIQSVDDAIETFMD