CuGenDBv2

Gene ID	Tan0011917
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Genome location	LG09:58095082..58096134
RNA-Seq Expression	Tan0011917
Synteny	Tan0011917
Gene Ontology terms	NA
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588215.1 hypothetical protein SDJN03_16780, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-92

84.88

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGNSLSPCLHAISTT R RSSAV LIFS+G+T++LTGNHH+AGEIMFQFPDMMICHADSFFIGHP+PSLAIDD LL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV
        A+IGAG AKFSGQ PFEY RG NG++VIK+VPEF+V LIS A  GE G GGN LCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKI+YSPC+FVGFKV
Subjt:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV

Query:  KQKEG
        KQKEG
Subjt:  KQKEG

KAG7022114.1 hypothetical protein SDJN02_15843, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-94

85.37

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGNSLSPCLHAISTTHR RSSAV LIFS+G+T++LTGNHH+AGEIMFQFPDMMICHADSFFIGHP+PSLAIDD LL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV
        A+IGA  AKFSGQ PFEY RG NG++VIK+VPEF+V LIS A  GE GGGGN LCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKI+YSPC+FVGFKV
Subjt:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV

Query:  KQKEG
        KQKEG
Subjt:  KQKEG

XP_008450347.1 PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]

2.8e-84

76.89

Show/hide

Query:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS
        MGN++SPCL +IS +  R R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD LL GETY VLPIDRFAS DVLSTSS
Subjt:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS

Query:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC
        LA IGAG     KFSG CPFEY RG NG+V+IKV+PEFIV LIS  AVDG    GGGG  LCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKI+YSPC
Subjt:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

XP_022927424.1 uncharacterized protein LOC111434251 [Cucurbita moschata]

1.5e-93

84.88

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGNSLSPCLHAISTT R  SSAV LIFS+G+T++LTGNHH+AGEIMFQFPDMMICHADSFFIGHP+PSLAIDD LL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV
        A+IGAG AKFSGQ PFEY RG NG++VIK+VPEF+V LIS A  GE GGGGN LCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKI+YSPC+FVGFKV
Subjt:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV

Query:  KQKEG
        KQKEG
Subjt:  KQKEG

XP_023530355.1 uncharacterized protein LOC111792953 [Cucurbita pepo subsp. pepo]

7.4e-93

83.9

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGNSLSPCLHAISTT R RSSAV LIFS+G+T++LTGNHH+AGEIMFQFPDMMICHADSFFIGHP+PSLAIDD L+ GETYFV+PID FASFDVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV
        A+IGAG AKFSGQ PFEY RG NG++VIK+VPEF+V LIS A  GE  GGGN LCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKI+YSPC+FVGFKV
Subjt:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV

Query:  KQKEG
        KQKEG
Subjt:  KQKEG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LZV5 Uncharacterized protein

1.3e-82

74.65

Show/hide

Query:  MGNSLSPCLHAISTT--HRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTS
        MGN++SPCL +IS +  HR R S VKL+F++G T+ L G+HH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD L+ GETY +LPIDRFAS DVLSTS
Subjt:  MGNSLSPCLHAISTT--HRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTS

Query:  SLAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSP
        SLA IGAG     KFSG CPFEY RG NGKV+IKV+PEFIV LIS  A+DG    GGGG  LCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKI+YSP
Subjt:  SLAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSP

Query:  CRFVGFKVKQKEG
        CRFVGFK+KQKEG
Subjt:  CRFVGFKVKQKEG

A0A1S3BP11 uncharacterized protein LOC103491983

1.4e-84

76.89

Show/hide

Query:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS
        MGN++SPCL +IS +  R R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD LL GETY VLPIDRFAS DVLSTSS
Subjt:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS

Query:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC
        LA IGAG     KFSG CPFEY RG NG+V+IKV+PEFIV LIS  AVDG    GGGG  LCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKI+YSPC
Subjt:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A5A7UN34 DUF4228 domain protein

3.1e-84

76.42

Show/hide

Query:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS
        MGN++SPCL +IS +  R R SAVKL+F+DG T+ L GNHH AGEIMFQFPDMM+CHA+SFFIGHP+PSL+IDD LL GETY VLPIDRFAS DVLSTSS
Subjt:  MGNSLSPCLHAIS-TTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSS

Query:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC
        LA IGAG     KFSG CPFEY RG NG+V+IKV+PEFIV LIS  A+DG    GGGG  LCSTPELKKHYDQLVGSTKGQVWSPKLE+ISEYKI+YSPC
Subjt:  LAAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS-GAVDG--ERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPC

Query:  RFVGFKVKQKEG
        RFVGFK+KQKEG
Subjt:  RFVGFKVKQKEG

A0A6J1EHY7 uncharacterized protein LOC111434251

7.3e-94

84.88

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGNSLSPCLHAISTT R  SSAV LIFS+G+T++LTGNHH+AGEIMFQFPDMMICHADSFFIGHP+PSLAIDD LL GETYFVLPID FASFDVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV
        A+IGAG AKFSGQ PFEY RG NG++VIK+VPEF+V LIS A  GE GGGGN LCSTPEL+KHYDQLVGSTKGQVWSPKLESISEYKI+YSPC+FVGFKV
Subjt:  AAIGAGTAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKV

Query:  KQKEG
        KQKEG
Subjt:  KQKEG

A0A6J1HB88 uncharacterized protein LOC111461744

1.6e-80

74.76

Show/hide

Query:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL
        MGN++SPCL   S T+R RSSAVKLIFS G TR L G+HH AGEIMFQFPDM++CHADSFFIGH +PSLAI+D LL GETY VLPIDRF+  DVLSTSSL
Subjt:  MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSL

Query:  AAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS--GAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRF
        AAIGAG     KFS  CPFEY RG NGK +IKV+PEFIV L+S  GA  GE   GG  LCSTPELKKHYDQLVG++KGQVWSP LE+ISEYKI+YSPCRF
Subjt:  AAIGAG---TAKFSGQCPFEYGRGANGKVVIKVVPEFIVGLIS--GAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRF

Query:  VGFKVKQKEG
        VGFKVKQKEG
Subjt:  VGFKVKQKEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28190.1 unknown protein

1.3e-13

33.33

Show/hide

Query:  CLH--AISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRF---ASFDVLSTSSLAA
        CLH     T++ GR   +KL+ SDG +  +     +  E+   FP   IC +D  +IG   P L+  + L  G  YF+LP D F    SF  ++T     
Subjt:  CLH--AISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRF---ASFDVLSTSSLAA

Query:  IGAGTAKFSGQ--CPFEYGRGANG-KVVIKVVPEFIVGL--------ISGAVDGERGGGGNV--LCSTPELKKHYDQLVGSTKGQVWSPKLESISEYK
         G    K + Q   PF   +G  G ++ I+V  EF+  L        ++   + E GGG     +C+T +LKK Y QLVG  +   W PKLE+I+E K
Subjt:  IGAGTAKFSGQ--CPFEYGRGANG-KVVIKVVPEFIVGL--------ISGAVDGERGGGGNV--LCSTPELKKHYDQLVGSTKGQVWSPKLESISEYK

AT5G12340.1 unknown protein

2.3e-44

45.54

Show/hide

Query:  MGNSL-SPCLHAISTTHRGRSSAVKLIFSDGL-TRTLTG-NHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLST
        MG SL + C   I    R R   V L+F + + T+TL G   H+AGEIMF+FPD ++CHADSF+IG  +P+LA+DD L+ G+TYFVLPI+RF  + +L+T
Subjt:  MGNSL-SPCLHAISTTHRGRSSAVKLIFSDGL-TRTLTG-NHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLST

Query:  SSLAAIGAGTAKF------------SGQCPFEYGRGANGKVVIKVVPEFIVGLIS-----GAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKL
        S L+   +                 S   PFEY +G NGK++IKV PEFI+ LI         +    G  + +C++PELKK YDQLVG T+  +WSP L
Subjt:  SSLAAIGAGTAKF------------SGQCPFEYGRGANGKVVIKVVPEFIVGLIS-----GAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKL

Query:  ESISEYKIKYSPCRFVGFKVKQKE
        ++ISE+KI+ SP RF G   KQ E
Subjt:  ESISEYKIKYSPCRFVGFKVKQKE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAATTCACTTTCTCCATGCCTTCATGCCATTTCCACCACCCACCGCGGTCGCTCCTCCGCCGTTAAACTCATCTTCTCCGACGGCCTCACCAGAACCCTCACCGG
AAATCACCACCTAGCCGGCGAGATCATGTTCCAATTCCCCGACATGATGATCTGCCACGCCGATTCCTTCTTCATCGGCCACCCGGTCCCCTCCTTAGCCATCGACGACC
CGCTCCTCACGGGCGAGACCTACTTCGTTCTCCCGATCGACCGATTCGCCTCCTTCGACGTACTCTCGACGTCGTCGCTCGCAGCGATCGGGGCTGGAACTGCAAAATTC
TCCGGCCAGTGTCCGTTCGAGTACGGCCGAGGCGCAAATGGGAAAGTTGTGATTAAGGTCGTGCCGGAGTTCATCGTCGGGCTTATTTCAGGAGCGGTCGACGGAGAGCG
GGGCGGAGGAGGTAATGTTTTATGTAGTACGCCAGAGTTAAAGAAACATTACGATCAACTAGTTGGATCGACGAAGGGGCAAGTTTGGTCGCCGAAGTTGGAGAGTATTT
CAGAGTATAAAATTAAGTATTCACCTTGTAGATTTGTAGGGTTTAAAGTTAAGCAAAAAGAAGGCTAA

mRNA sequence

Show/hide mRNA sequence

CTCTCATTTCATAATTTCAATGGGAAATTCACTTTCTCCATGCCTTCATGCCATTTCCACCACCCACCGCGGTCGCTCCTCCGCCGTTAAACTCATCTTCTCCGACGGCC
TCACCAGAACCCTCACCGGAAATCACCACCTAGCCGGCGAGATCATGTTCCAATTCCCCGACATGATGATCTGCCACGCCGATTCCTTCTTCATCGGCCACCCGGTCCCC
TCCTTAGCCATCGACGACCCGCTCCTCACGGGCGAGACCTACTTCGTTCTCCCGATCGACCGATTCGCCTCCTTCGACGTACTCTCGACGTCGTCGCTCGCAGCGATCGG
GGCTGGAACTGCAAAATTCTCCGGCCAGTGTCCGTTCGAGTACGGCCGAGGCGCAAATGGGAAAGTTGTGATTAAGGTCGTGCCGGAGTTCATCGTCGGGCTTATTTCAG
GAGCGGTCGACGGAGAGCGGGGCGGAGGAGGTAATGTTTTATGTAGTACGCCAGAGTTAAAGAAACATTACGATCAACTAGTTGGATCGACGAAGGGGCAAGTTTGGTCG
CCGAAGTTGGAGAGTATTTCAGAGTATAAAATTAAGTATTCACCTTGTAGATTTGTAGGGTTTAAAGTTAAGCAAAAAGAAGGCTAAATAAAACATAACCCTATTTTATT
CCCACCCACAAACCAACAATCATGCAAATTATTTCACCTTTACAAACCTTCTTCCCATATTTGACAGCCAAAAAAATGGCACTAACCCAATACTTCAATCTTCTTACAAA
ATATTGGGAATATGCATATGTTGAAGTGATGTTATGTTATGTTTAGTATATGTAAAATAGGGGAGAAAAAGAGTATTTTAATTTCTTCTCGACTTTTCGGCCAACGCCGG
GAGCGTTTTGGATTGTTGGGAGAGTTGAAGCTTATTCTGACCACTTTTTCTAGTCAGATAGCGATCAATCACTTTGTAACGAAATATTATTACGTCTAAGCATTGTTTTG
TATTGCGTGTATTTGTTTCTTTTAAACAGCTACCAAATGTGTTGATCAGAAATGATTTAGGAG

Protein sequence

Show/hide protein sequence

MGNSLSPCLHAISTTHRGRSSAVKLIFSDGLTRTLTGNHHLAGEIMFQFPDMMICHADSFFIGHPVPSLAIDDPLLTGETYFVLPIDRFASFDVLSTSSLAAIGAGTAKF
SGQCPFEYGRGANGKVVIKVVPEFIVGLISGAVDGERGGGGNVLCSTPELKKHYDQLVGSTKGQVWSPKLESISEYKIKYSPCRFVGFKVKQKEG

Tan0011917 (gene) of Snake gourd v1 genome