; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0011970 (gene) of Snake gourd v1 genome

Gene IDTan0011970
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG11:61750449..61752804
RNA-Seq ExpressionTan0011970
SyntenyTan0011970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51411.1 hypothetical protein Csa_007923 [Cucumis sativus]3.4e-2884.34Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD
        MKS  S SSVEALRN GEGIAS+LSS D S  LLATRPPRQVVSI TCSKLCA+CFV GVVVGYSLKRCVNRW+SKLLRRLKD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD

XP_022956291.1 uncharacterized protein LOC111458016 [Cucurbita moschata]2.8e-3092.86Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKSAA PSSVEALRN GEGIASALSSSDQS LLLATRPPRQVVSILTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_022974252.1 uncharacterized protein LOC111472885 [Cucurbita maxima]3.3e-3192.86Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKSAA PSSVEALR+ GEGIASALSSSDQS LLLATRPPRQVVSILTCSKLC ICFVAGV+VGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_023540347.1 uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo]9.6e-3194.05Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKSAA PSSVEALRN GEGIASALSSSDQS LLLATRPPRQVVSILTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLKDD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_038893067.1 uncharacterized protein LOC120081950 [Benincasa hispida]2.5e-3190.48Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS  S SSVE LRN GEGIASALSSSDQS LLLATRPPRQVVSI TCSKLCA+CFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

TrEMBL top hitse value%identityAlignment
A0A0A0KUK2 Uncharacterized protein1.7e-2884.34Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD
        MKS  S SSVEALRN GEGIAS+LSS D S  LLATRPPRQVVSI TCSKLCA+CFV GVVVGYSLKRCVNRW+SKLLRRLKD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD

A0A5N5I158 Uncharacterized protein2.3e-1769.57Show/hide
Query:  GGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        G EG+A+ALSSSDQSH+LL  RP RQ+VS+ TCSKLC ICFVAG+VVGY+LKR V  W SKLL++++DD
Subjt:  GGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

A0A6J1GW53 uncharacterized protein LOC1114580161.4e-3092.86Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKSAA PSSVEALRN GEGIASALSSSDQS LLLATRPPRQVVSILTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

A0A6J1I9S5 uncharacterized protein LOC1114728851.6e-3192.86Show/hide
Query:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKSAA PSSVEALR+ GEGIASALSSSDQS LLLATRPPRQVVSILTCSKLC ICFVAGV+VGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

W9RT53 Uncharacterized protein9.1e-1967.47Show/hide
Query:  KSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        KSA+S SS   +    EGI++ALSS DQS LL+ +RPPR VVS+ TCSKLCAICFV GVVVGY+LKR V RW S+LL+RLKDD
Subjt:  KSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19240.1 unknown protein3.3e-1353.33Show/hide
Query:  KSAASPSS------VEALRNGGEGIASALSSS-DQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        KSAAS SS       + L       A  L+++ D     L TRPP   VS+ TCSKLCA+ FVAGV VGY+LKR V RW SKLLRR+KDD
Subjt:  KSAASPSS------VEALRNGGEGIASALSSS-DQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGGCGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCTGATCAGTCTCATCTGTTGCTTGCCACTAG
ACCTCCCAGGCAAGTAGTATCAATATTGACTTGTTCAAAGCTATGTGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGCGTCAATCGATGGG
TTTCCAAGCTATTGAGGAGATTGAAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTACTTGTGAAGCGCAGAACCCTAAAGCAGGGGCCCAAACCCTGTGTGTGTGTTTCGCTCTCTTGATCAAATCCGGCCGTGACCGGAGACTGCAGAAATGAAATCGGC
GGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAGGAGAAGGAATCGCCTCCGCCCTATCTTCTTCTGATCAGTCTCATCTGTTGCTTGCCACTAGACCTCCCAGGC
AAGTAGTATCAATATTGACTTGTTCAAAGCTATGTGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGCGTCAATCGATGGGTTTCCAAGCTA
TTGAGGAGATTGAAAGATGATTGATATGTCCATCCCCTTGTTTTGCAGATTGATCAATTGCCATGAAAGTTGTCGCTTCAGCAGGAAAGTCACCAATGTCAAGCGCAATT
TTGCATGTTATTTTTGTTTGTTTTAGGTTAAATTAATAGTTTAATCTTCAAAGTTCTAGGTTTATGTCTATCTGATCCTTGAACTTACAAAAATGTCTAATAGGCCCGTG
AATTTTCAAATATTGGTTTCTGTTTGGTCCCTAGACTTAAAAAAGTGTGTAATATATCTTAAACTTTGAAATTTGTGTCCAATAAGTCTCTAAATTTTCATTTTTGTATC
TAATAAGTCATTCATCCATTCAACATTCTAAAACATTCACGAAATTACTATACACAAAATTGAAAGTTCAGGGTTTTATTAGACATTTTATTCATTTATATATTTGATAG
ATCAATTAGTTTTTAAAAAATGTTGAAAATGTCAGAGACCTACTAGACACAAAATTGAAATTTCTTGGTCTATTAGATATTTAAAATTCAGGGACTTATTAGACACAAAC
CTAAAAGTTTAGGTACTAAAATTTTAATTTAACCTTTGTTTTATGATCTTTCTACTTTCTATCTTTTTTCCCCTCTTCTACAACGTAG
Protein sequenceShow/hide protein sequence
MKSAASPSSVEALRNGGEGIASALSSSDQSHLLLATRPPRQVVSILTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD