; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012023 (gene) of Snake gourd v1 genome

Gene IDTan0012023
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationLG02:91246802..91250219
RNA-Seq ExpressionTan0012023
SyntenyTan0012023
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR018783 - Transcription factor, enhancer of yellow 2
IPR038212 - Transcription factor EnY2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585223.1 Transcription and mRNA export factor ENY2, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5197.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDR+QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIR+FLASTAI
Subjt:  RIRSFLASTAI

XP_008445505.1 PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo]2.9e-5197.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDR+ QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFLASTAI
Subjt:  RIRSFLASTAI

XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]7.7e-5298.2Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDR+QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFLASTAI
Subjt:  RIRSFLASTAI

XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]1.7e-5197.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDR+QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIR+FLASTAI
Subjt:  RIRSFLASTAI

XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]3.8e-5197.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDR+  PTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFLASTAI
Subjt:  RIRSFLASTAI

TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY24.1e-5196.4Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDR+ QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFL STAI
Subjt:  RIRSFLASTAI

A0A1S3BDR5 Transcription and mRNA export factor ENY21.4e-5197.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPEPEDDR+ QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFLASTAI
Subjt:  RIRSFLASTAI

A0A6J1BSW0 Transcription and mRNA export factor ENY21.6e-5097.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MRASINRPPTPE EDDRDQQ TFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFL STAI
Subjt:  RIRSFLASTAI

A0A6J1GGQ4 Transcription and mRNA export factor ENY23.7e-5298.2Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDR+QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIRSFLASTAI
Subjt:  RIRSFLASTAI

A0A6J1KQ41 Transcription and mRNA export factor ENY28.3e-5297.3Show/hide
Query:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
        MR SINRPPTPEPEDDR+QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ
Subjt:  MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQ

Query:  RIRSFLASTAI
        RIR+FLASTAI
Subjt:  RIRSFLASTAI

SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY21.5e-2670.59Show/hide
Query:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        TIN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  TINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA

Q3ZBJ0 Transcription and mRNA export factor ENY24.4e-2670.24Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA

Q6NQ54 Transcription and mRNA export factor ENY21.5e-3461.74Show/hide
Query:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA
        M+ S+NRPPTP+ +D  D     + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKA
Subjt:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA

Query:  ELLQRIRSFLASTAI
        ELL RI++F+ S A+
Subjt:  ELLQRIRSFLASTAI

Q9JIX0 Transcription and mRNA export factor ENY24.4e-2670.24Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA

Q9NPA8 Transcription and mRNA export factor ENY24.4e-2670.24Show/hide
Query:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  INIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA

Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).1.1e-3561.74Show/hide
Query:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA
        M+ S+NRPPTP+ +D  D     + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKA
Subjt:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKA

Query:  ELLQRIRSFLASTAI
        ELL RI++F+ S A+
Subjt:  ELLQRIRSFLASTAI

AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).1.6e-2657.45Show/hide
Query:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        M+ S+NRPPTP+ +D  D     + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  MRASINRPPTPEPEDDRD----QQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCTTCCATTAATCGGCCTCCGACGCCCGAACCAGAGGATGATCGAGATCAGCAGCCTACTTTTCAAGAAACAATCAACATCAAGCTGATTGAAAGTGGCGAAAA
AGAACGGCTTAAAGAGCTTTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTA
GTGTCGACGACCTTGTGCAGGTCATTACTCCTAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGCATCAACAGCC
ATCTGA
mRNA sequenceShow/hide mRNA sequence
GATTTACTAACTTGCCGTTCATCGTCGTCTCCAGTCAGCTGGCGAGTCTCTCGAGTAGTTGGACGCGCTCTGTCGCCGTGAAAGTGAAAATTTTCAAGAATCTCTAATCA
TAATCTTTCCCATAGAATGAGGGCTTCCATTAATCGGCCTCCGACGCCCGAACCAGAGGATGATCGAGATCAGCAGCCTACTTTTCAAGAAACAATCAACATCAAGCTGA
TTGAAAGTGGCGAAAAAGAACGGCTTAAAGAGCTTTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAA
GGAAGGAACAATGTTAGTGTCGACGACCTTGTGCAGGTCATTACTCCTAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTT
CCTTGCATCAACAGCCATCTGACATACACAGGCAGATTGCAAGCAGCCCAAAAGTATCTTCTTCATCCCCTTACTAAACCAGCTAAAACCAATTATTCTACATTATATAT
GGAATTTGTTTGGACTATTTATCAAATTAGATTGTCTCTGGGAGAATCCAAGTCAAGTTCCATTTTCGGGTTATGGAGGATGCCGCATTGTGTAAACTTCATTCGCTGTC
AACAAAATCCAGATTGGTGAGTGTTTTGTTGTATAATGCAAGTAAAAAGCTAGCTGTGTGAGCTTTATTTAATACTCTGAACACTGAGACACATGATGATAAGCCTGTTT
TACCGAATATTTGGTATGTTGGAACTCTTGATTGGGGCTACTTTGATAGTGTATTATATATTTCGATTTGTTCTATTGTTTGCA
Protein sequenceShow/hide protein sequence
MRASINRPPTPEPEDDRDQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
I