CuGenDBv2

Gene ID	Tan0012025
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ATP-dependent RNA helicase
Genome location	LG09:67935975..67938054
RNA-Seq Expression	Tan0012025
Synteny	Tan0012025
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6587786.1 hypothetical protein SDJN03_16351, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-46

65.27

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYLFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ F+G  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

KAG7035711.1 hypothetical protein SDJN02_02509, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.8e-46

64.67

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYLFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ F+G  GYVK+ VT EVS   LI RGDEVMSESA N+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

XP_022933890.1 uncharacterized protein LOC111441170 isoform X1 [Cucurbita moschata]

1.2e-46

65.87

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYLFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ F+G  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

XP_022968868.1 uncharacterized protein LOC111468025 [Cucurbita maxima]

1.0e-45

65.27

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC LFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ FRG  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

XP_023532011.1 uncharacterized protein LOC111794104 [Cucurbita pepo subsp. pepo]

7.8e-46

64.67

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDCYLFAPL+SPSPFNS        + I DIE  ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ F+G  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B8Y3 uncharacterized protein LOC103487306 isoform X1

2.9e-30

49.73

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Query:  MAKKMVRV--GGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAP-LVSPSPFNSSHTT-IKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF
        MAKKMV V  GG GGI KKR++KR+KKK IHKVIDYLLSDCYLFAP L+SPSP N+SH T  + IEI  RTKDN+S++KK +DYLKSDCY+YA  V P+ 
Subjt:  MAKKMVRV--GGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAP-LVSPSPFNSSHTT-IKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF

Query:  FR-------GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEATVLDQLNATPKEPSNHTMYPNCRSLSVSG
         R       G V Y KKV+ EV                         +  ++FVEATV    + TP+     ++Y N  SL++SG
Subjt:  FR-------GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEATVLDQLNATPKEPSNHTMYPNCRSLSVSG

A0A5D3B7P7 Uncharacterized protein

2.9e-30

49.73

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Query:  MAKKMVRV--GGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAP-LVSPSPFNSSHTT-IKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF
        MAKKMV V  GG GGI KKR++KR+KKK IHKVIDYLLSDCYLFAP L+SPSP N+SH T  + IEI  RTKDN+S++KK +DYLKSDCY+YA  V P+ 
Subjt:  MAKKMVRV--GGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAP-LVSPSPFNSSHTT-IKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF

Query:  FR-------GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEATVLDQLNATPKEPSNHTMYPNCRSLSVSG
         R       G V Y KKV+ EV                         +  ++FVEATV    + TP+     ++Y N  SL++SG
Subjt:  FR-------GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEATVLDQLNATPKEPSNHTMYPNCRSLSVSG

A0A6J1C0T7 uncharacterized protein LOC111007025 isoform X1

1.4e-29

56.64

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Query:  MAKKMVRVGGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVSPS-PFNSSHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF-FR
        MAK++V  GG    +KK I+KR KKKTIHKV+DYL+SD YLFAPL+S + PFN S +T K IE  ER KDN+S++KKIEDYLKSDCY+YAP + PQ   R
Subjt:  MAKKMVRVGGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVSPS-PFNSSHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQF-FR

Query:  GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTD
        GC   +KKVT             E+MSESAAN+ + ++ICT D
Subjt:  GCVGYVKKVTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTD

A0A6J1F636 uncharacterized protein LOC111441170 isoform X1

5.8e-47

65.87

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+MV V   GG +KKR++K R KKK IHKVIDYLLSDCYLFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ F+G  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

A0A6J1HZC1 uncharacterized protein LOC111468025

4.9e-46

65.27

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Query:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA
        MAK+M+ V   GG +KKR++K R KKK IHKVIDYLLSDC LFAPL+SPSPFNS        + I DIEI ER KD++S LKK+ DYLKSDCY+YA  VA
Subjt:  MAKKMVRVGGDGGILKKRIVK-RNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNS------SHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVA

Query:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP
        PQ FRG  GYVK+ VT EVS   LI RGDEVMSESAAN+TK++ IC+TD +EA  V+DQ NAT KEP
Subjt:  PQFFRGCVGYVKK-VTAEVSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEA-TVLDQLNATPKEP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G57790.1 unknown protein

5.1e-11

29.08

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Query:  KKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVS-----------PSPFNSSHTTIKDIEI-------MERTKDNQSVLKKIEDYLKSDCYLYAPFV-APQF
        +K++ ++  ++ +  ++ YL SD YLFAPL S           P P NS  +T+ DI +       +E+    + + +K+++YLKSDCY+Y+P + +P  
Subjt:  KKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVS-----------PSPFNSSHTTIKDIEI-------MERTKDNQSVLKKIEDYLKSDCYLYAPFV-APQF

Query:  FRGCVGYVKKVTAEVST---TTLIRRGDEVMSESAANVTKQ
            V    ++T EVST   TT ++  D       +++ +Q
Subjt:  FRGCVGYVKKVTAEVST---TTLIRRGDEVMSESAANVTKQ

AT5G57790.2 unknown protein

5.1e-11

29.08

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Query:  KKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVS-----------PSPFNSSHTTIKDIEI-------MERTKDNQSVLKKIEDYLKSDCYLYAPFV-APQF
        +K++ ++  ++ +  ++ YL SD YLFAPL S           P P NS  +T+ DI +       +E+    + + +K+++YLKSDCY+Y+P + +P  
Subjt:  KKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVS-----------PSPFNSSHTTIKDIEI-------MERTKDNQSVLKKIEDYLKSDCYLYAPFV-APQF

Query:  FRGCVGYVKKVTAEVST---TTLIRRGDEVMSESAANVTKQ
            V    ++T EVST   TT ++  D       +++ +Q
Subjt:  FRGCVGYVKKVTAEVST---TTLIRRGDEVMSESAANVTKQ

Sequences

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CDS sequence

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ATGGCAAAGAAAATGGTGCGTGTTGGAGGGGACGGTGGGATTCTAAAGAAGAGAATCGTCAAGAGGAACAAGAAGAAAACCATTCACAAAGTCATCGATTATCTCTTATC
CGATTGCTACTTGTTTGCTCCTCTCGTTTCTCCTTCACCCTTTAATTCTTCTCACACAACCATAAAAGATATCGAAATTATGGAACGCACAAAGGATAATCAGAGTGTGC
TGAAGAAGATTGAGGATTATTTGAAATCTGATTGCTACTTGTATGCTCCTTTCGTTGCACCCCAATTCTTCAGAGGGTGTGTTGGGTACGTAAAAAAGGTAACTGCGGAA
GTTTCAACGACGACATTAATTAGAAGAGGGGACGAAGTTATGAGTGAATCGGCTGCTAATGTGACGAAACAGAAGAGTATTTGCACTACTGATTTTGTGGAAGCAACGGT
TCTGGATCAACTAAATGCCACACCAAAGGAACCATCGAACCACACCATGTATCCAAATTGTCGATCTTTGTCAGTCTCAGGTAATGCATCAACTTACATATAG

mRNA sequence

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Protein sequence

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MAKKMVRVGGDGGILKKRIVKRNKKKTIHKVIDYLLSDCYLFAPLVSPSPFNSSHTTIKDIEIMERTKDNQSVLKKIEDYLKSDCYLYAPFVAPQFFRGCVGYVKKVTAE
VSTTTLIRRGDEVMSESAANVTKQKSICTTDFVEATVLDQLNATPKEPSNHTMYPNCRSLSVSGNASTYI

Tan0012025 (gene) of Snake gourd v1 genome