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Tan0012029 (gene) of Snake gourd v1 genome

Gene IDTan0012029
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
Genome locationLG02:85434845..85435603
RNA-Seq ExpressionTan0012029
SyntenyTan0012029
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]8.0e-2670.37Show/hide
Query:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        M+ + S+LQLSRE+IKEIFREHDIDGDG LS+SE+ +AF F G++LP+YKAHYG+A+ADE+GDG+I E+ELDKLVDYA +F
Subjt:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]5.2e-2569.14Show/hide
Query:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        M+ + +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE+GDGFI E+ELDKLVDYA +F
Subjt:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]5.7e-2471.05Show/hide
Query:  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        S+   SREE+KEIFREHDIDGDG LSISE+ +A  FLG+ +P+YKAHYG+AY DE+GDG I+EDELDKL+DYA RF
Subjt:  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]6.8e-2570Show/hide
Query:  AMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        A+  +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE+GDGFI E+ELDKLVDYA +F
Subjt:  AMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

XP_023002888.1 calmodulin-like [Cucurbita maxima]2.8e-2367.95Show/hide
Query:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK
        ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+E+EL+KLVDYA R +  K
Subjt:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein2.8e-2471.05Show/hide
Query:  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        S+   SREE+KEIFREHDIDGDG LSISE+ +A  FLG+ +P+YKAHYG+AY DE+GDG I+EDELDKL+DYA RF
Subjt:  SRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

A0A0A0LRC1 Uncharacterized protein2.5e-2569.14Show/hide
Query:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        M+ + +RLQLSRE+IKEIFREHDIDGDG LS++E+ +AF   G++LP+YKAHYG+A+ADE+GDGFI E+ELDKLVDYA +F
Subjt:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

A0A5A7UYC0 Putative calcium-binding protein CML103.9e-2670.37Show/hide
Query:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF
        M+ + S+LQLSRE+IKEIFREHDIDGDG LS+SE+ +AF F G++LP+YKAHYG+A+ADE+GDG+I E+ELDKLVDYA +F
Subjt:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRF

A0A6J1GK16 calmodulin-like1.4e-2367.95Show/hide
Query:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK
        ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+E+EL+KLVDYA R +  K
Subjt:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK

A0A6J1KUW2 calmodulin-like1.4e-2367.95Show/hide
Query:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK
        ++LSR +IKEIF EHDIDGDG LS+SE+T+AF F G+++P YKAHYGLAYAD DGDG I+E+EL+KLVDYA R +  K
Subjt:  LQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPK

SwissProt top hitse value%identityAlignment
P05933 Calmodulin1.1e-0432.31Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        + EE++E F+  D DG+G +++ E+T     LG  L   +    +  AD DGDG I  +E  +++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

P18061 Calmodulin1.4e-0440Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        S EEIKE FR  D DG+G +S +E+      LG  L   +    +  AD DGDG I  +E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

P62184 Calmodulin1.4e-0438.46Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        S EEI+E FR  D DGDG +S +E+      LG  L   +    +  AD DGDG +  +E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

Q8RZB5 Probable calcium-binding protein CML108.1e-0541.94Show/hide
Query:  EEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKL
        EE++ +FR+ D +GDG +S SE+   F  LG+     +    +A AD DGDGFI+ DE   L
Subjt:  EEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKL

Q8X187 Calmodulin1.1e-0440Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        S EEIKE F+  D DG+G +S +E+      LG  L   +    +  AD DGDG I  DE  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 41.1e-0436.92Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        S EE+KE FR  D D +G +S +E+      LG  L   +    +  AD DGDG I  +E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

AT1G66410.2 calmodulin 41.1e-0436.92Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        S EE+KE FR  D D +G +S +E+      LG  L   +    +  AD DGDG I  +E  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

AT3G10190.1 Calcium-binding EF-hand family protein8.3e-0535.94Show/hide
Query:  EIKEIFREHDIDGDGVLSISEVTRAFCFLGN-LLPYYKAHYGLAYADEDGDGFITEDELDKLVD
        E+KE F   D D DG++S  E+ R F  +G+           +A  DEDGDGF+   E  +++D
Subjt:  EIKEIFREHDIDGDGVLSISEVTRAFCFLGN-LLPYYKAHYGLAYADEDGDGFITEDELDKLVD

AT3G51920.1 calmodulin 92.9e-0533.33Show/hide
Query:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        MA + S+ + + +E+ E+FR  D DGDG++S  E+      +G  +   +A + +  AD DGDGF++  E  K++
Subjt:  MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV

AT4G14640.1 calmodulin 86.4e-0535.38Show/hide
Query:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV
        + EE+KE F+  D D +G +S SE++     LG  L   +    +  AD DGDG +  DE  K++
Subjt:  SREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCG
AGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCTGACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGC
TCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAAACTTTATTCCTTCTACAACACCTGCAATAAAAAATTTGTTAAAGATGCCCCAAGAGCATTTATTCTACTTGAAATAATGTGTGGAAGATATCATAAAGAATATCAAT
TTTGCATCTCTCTCTCTCTCTAATGCTTCCTTTTACCAACTCTCTATAAGATGAACAACTCCATCCCAAGAAAGCTATAAGCCAAAGAAAATTATAATCATCAACTCACA
AGATTAAAGCACCCCATTTGGCCAAGCCATTCTCCGACATCATCCGATGGCAATGTCCCGATCCCGATTGCAGTTGTCGAGGGAGGAAATAAAGGAGATCTTTAGAGAGC
ACGACATCGACGGAGATGGCGTGCTCAGCATCAGCGAGGTCACTCGAGCCTTCTGTTTCTTAGGCAATCTTCTTCCGTACTACAAAGCTCACTATGGTCTTGCTTATGCT
GACGAAGATGGTGATGGCTTCATCACTGAAGATGAGCTTGATAAGCTCGTTGACTATGCCATGAGGTTTCATGCCCCAAAGCATCATGGCAATGGTAAATCAATTGTGTA
ATTGTTCTATTTTTATGCATACTGTCACTATATGTCTATTGCATTGGACTTTTGTTTTCTGAAGCGCTATGTTCTGTAATAAAGTATCCCTTCCTATTCTATCCATGGAT
TTAAATATCCATAGTTAACACATGTGAAGGTTTTGATTTTATGAAAAAATACTGATGTCTATGAATGTTATTAAAAAGTAGTTTTTTTTTTTATGTTCA
Protein sequenceShow/hide protein sequence
MAMSRSRLQLSREEIKEIFREHDIDGDGVLSISEVTRAFCFLGNLLPYYKAHYGLAYADEDGDGFITEDELDKLVDYAMRFHAPKHHGNGKSIV