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Tan0012053 (gene) of Snake gourd v1 genome

Gene IDTan0012053
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG11:1313988..1315193
RNA-Seq ExpressionTan0012053
SyntenyTan0012053
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC33378.1 hypothetical protein L484_010788 [Morus notabilis]4.8e-1446.62Show/hide
Query:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI
        +D    S  F EL S II +L K+PPLPIP  I TSSS+           +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V+ L+LLFY   +L  
Subjt:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI

Query:  FSNLAHSILCPFPLDSPKPKDVSAGE-----FLCFFLRFRLSNSVVLF
         S L  SIL P    +  P+ VSAG+     F CF      S  + LF
Subjt:  FSNLAHSILCPFPLDSPKPKDVSAGE-----FLCFFLRFRLSNSVVLF

KAE8021313.1 hypothetical protein FH972_007215 [Carpinus fangiana]2.5e-1553.57Show/hide
Query:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILT----SSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAH
        ++DP   SS   EL S I+ +L + PPLP P P LT    SS  +SPA F SLF+GIS+AL+LFG++T  IGF+LMP+V+ L+LLFYF   +SI S    
Subjt:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILT----SSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAH

Query:  SILCPFPLDSPK
        SILC  P+DSPK
Subjt:  SILCPFPLDSPK

XP_010112383.2 uncharacterized protein LOC21394073 isoform X1 [Morus notabilis]6.9e-1348.82Show/hide
Query:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI
        +D    S  F EL S II +L K+PPLPIP  I TSSS+           +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V+ L+LLFY   +L  
Subjt:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI

Query:  FSNLAHSILCPFPLDSPKPKDVSAGEF
         S L  SIL  FP  SP+    +  E+
Subjt:  FSNLAHSILCPFPLDSPKPKDVSAGEF

XP_022134096.1 uncharacterized protein LOC111006451 [Momordica charantia]1.3e-1652.76Show/hide
Query:  SSAFPELFSRIIDVLSKIPPLPIPI--------------PILTSSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSN
        S A  +L S I+DVL +IPP PIPI               +L  +S++SPAVFASLFI IS+ALILFG I L+IGF+L+P+++++LLLFYFFN++SI SN
Subjt:  SSAFPELFSRIIDVLSKIPPLPIPI--------------PILTSSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSN

Query:  LAHSILCPFPLDSPKPKDVSA-GEFLC
         A S+LCP+      PK VSA  EF C
Subjt:  LAHSILCPFPLDSPKPKDVSA-GEFLC

XP_024031813.1 uncharacterized protein LOC21394073 isoform X2 [Morus notabilis]4.0e-1350Show/hide
Query:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI
        +D    S  F EL S II +L K+PPLPIP  I TSSS+           +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V+ L+LLFY   +L  
Subjt:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI

Query:  FSNLAHSILCPFPLDSPKPKDVSAGE
         S L  SIL P    +  P+ VSA E
Subjt:  FSNLAHSILCPFPLDSPKPKDVSAGE

TrEMBL top hitse value%identityAlignment
A0A2I4HAE7 uncharacterized protein LOC1090150955.9e-1045.69Show/hide
Query:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTS-----------SSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLS
        ++DP   S  F EL S II +L+  PPL +P+P L S           +  SSPA F SLF+GIS+ L+LFG++T  IGF+LMP+V  L+ LFYF  ++ 
Subjt:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTS-----------SSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLS

Query:  IFSNLAHSILCPFPLD
          S L  SILCP   D
Subjt:  IFSNLAHSILCPFPLD

A0A5N6QUQ1 Uncharacterized protein1.2e-1553.57Show/hide
Query:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILT----SSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAH
        ++DP   SS   EL S I+ +L + PPLP P P LT    SS  +SPA F SLF+GIS+AL+LFG++T  IGF+LMP+V+ L+LLFYF   +SI S    
Subjt:  EEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILT----SSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAH

Query:  SILCPFPLDSPK
        SILC  P+DSPK
Subjt:  SILCPFPLDSPK

A0A6I9UFL0 uncharacterized protein LOC1051774421.0e-0950.98Show/hide
Query:  ELFSRIIDVLSKIPPLPIPIPILT------SSSNS-----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAHSILCP
        EL S II +L + PPLPI  P L+      SSS+S     SPA F SLFIGIS+AL+LFG++T +IG +LMP+V++L+LLFYF  ++S  S +   IL P
Subjt:  ELFSRIIDVLSKIPPLPIPIPILT------SSSNS-----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAHSILCP

Query:  FP
         P
Subjt:  FP

A0A6J1BX03 uncharacterized protein LOC1110064516.5e-1752.76Show/hide
Query:  SSAFPELFSRIIDVLSKIPPLPIPI--------------PILTSSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSN
        S A  +L S I+DVL +IPP PIPI               +L  +S++SPAVFASLFI IS+ALILFG I L+IGF+L+P+++++LLLFYFFN++SI SN
Subjt:  SSAFPELFSRIIDVLSKIPPLPIPI--------------PILTSSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSN

Query:  LAHSILCPFPLDSPKPKDVSA-GEFLC
         A S+LCP+      PK VSA  EF C
Subjt:  LAHSILCPFPLDSPKPKDVSA-GEFLC

W9SAM7 Uncharacterized protein2.3e-1446.62Show/hide
Query:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI
        +D    S  F EL S II +L K+PPLPIP  I TSSS+           +SP  FASLF+GISLAL+LFG++T  IGFVLMP+V+ L+LLFY   +L  
Subjt:  EDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSN-----------SSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSI

Query:  FSNLAHSILCPFPLDSPKPKDVSAGE-----FLCFFLRFRLSNSVVLF
         S L  SIL P    +  P+ VSAG+     F CF      S  + LF
Subjt:  FSNLAHSILCPFPLDSPKPKDVSAGE-----FLCFFLRFRLSNSVVLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27290.1 unknown protein4.9e-0938.06Show/hide
Query:  SSAFPELFSRIIDVLSKIPPLPIPIP-----------------ILTSSSNS----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFN
        S  F +L S ++++L + PP+PI +P                   +SSS S    SP+ FASL +GIS+AL+L G++T  IGF+LMP V++L+L+FY   
Subjt:  SSAFPELFSRIIDVLSKIPPLPIPIP-----------------ILTSSSNS----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFN

Query:  LLSIFSNLAHSILCPFPLDSPKP--KDVSAGEFL
        ++S  S +  SILC + L  P P  K++S  + L
Subjt:  LLSIFSNLAHSILCPFPLDSPKP--KDVSAGEFL

AT1G27290.2 unknown protein4.9e-0938.06Show/hide
Query:  SSAFPELFSRIIDVLSKIPPLPIPIP-----------------ILTSSSNS----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFN
        S  F +L S ++++L + PP+PI +P                   +SSS S    SP+ FASL +GIS+AL+L G++T  IGF+LMP V++L+L+FY   
Subjt:  SSAFPELFSRIIDVLSKIPPLPIPIP-----------------ILTSSSNS----SPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFN

Query:  LLSIFSNLAHSILCPFPLDSPKP--KDVSAGEFL
        ++S  S +  SILC + L  P P  K++S  + L
Subjt:  LLSIFSNLAHSILCPFPLDSPKP--KDVSAGEFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACGAAGAAGATCCTCCATTTCCATCTAGCGCTTTTCCCGAGCTCTTCTCCAGGATCATCGACGTCCTGAGCAAAATTCCTCCATTGCCAATCCCCATCCCCAT
CCTCACTTCCTCCTCCAATTCCTCTCCCGCCGTCTTCGCCTCTCTTTTCATCGGAATTTCTCTCGCTTTGATTCTCTTCGGCGCGATTACTCTCCTGATTGGATTCGTCT
TGATGCCTGTTGTTGTATCCTTGCTCCTTCTCTTCTACTTCTTCAACCTCCTTTCCATTTTCTCCAATTTGGCTCACTCCATCCTCTGCCCCTTCCCTCTCGACTCCCCG
AAACCGAAAGATGTTTCCGCCGGTGAATTCCTCTGTTTCTTCCTCCGTTTTCGCCTCTCTAATTCTGTTGTGTTGTTCTGTCTTGAGGTTAATCAGTGA
mRNA sequenceShow/hide mRNA sequence
GCTCACTCTCCTCACACCTGTATATATATAGGTGTAAGTTCTCTCAAAAGTTTTAAAAATACAAAGAAATCGCGCGGAGTTCAAGTTTCACGATGAACCACGAAGAAGAT
CCTCCATTTCCATCTAGCGCTTTTCCCGAGCTCTTCTCCAGGATCATCGACGTCCTGAGCAAAATTCCTCCATTGCCAATCCCCATCCCCATCCTCACTTCCTCCTCCAA
TTCCTCTCCCGCCGTCTTCGCCTCTCTTTTCATCGGAATTTCTCTCGCTTTGATTCTCTTCGGCGCGATTACTCTCCTGATTGGATTCGTCTTGATGCCTGTTGTTGTAT
CCTTGCTCCTTCTCTTCTACTTCTTCAACCTCCTTTCCATTTTCTCCAATTTGGCTCACTCCATCCTCTGCCCCTTCCCTCTCGACTCCCCGAAACCGAAAGATGTTTCC
GCCGGTGAATTCCTCTGTTTCTTCCTCCGTTTTCGCCTCTCTAATTCTGTTGTGTTGTTCTGTCTTGAGGTTAATCAGTGATTTGATTCCTCTTTTCTAATTTGCAGTTC
CGCCGGAAGATTCGTGCTGCTGCTGCTGCTCAATCCCGCCGCCCCTGATCACAACTTAGGCTTGTTCAAGATTCTCAAGAAATTGCTTAGAACAAGTGATAGAGAATGCA
ACGGCAGATTCATTGGAGATTCAAGTTCATGATCGAGTGACCTGCCAAAAGAAAAAAAAAAGTTTAAGATCGAGTGTTTAGGGCTTCTGTTAGCTTTTCATATCTTGGAT
TCTTAGTGGGCTTTTTTTGGGCTTTTAGATTTACTTTGTCTGAATTTGGGCTTATCCATTTTCAGGCCTTTATTTGGCTAGCAGCCTTTATGACATTTTTCCAATTAATT
GGGTCTGTAAGCTGAAGGGGAATGCAGGTTTTTTTTTTTTTTTAAAAAAAGACTGATTTGAA
Protein sequenceShow/hide protein sequence
MNHEEDPPFPSSAFPELFSRIIDVLSKIPPLPIPIPILTSSSNSSPAVFASLFIGISLALILFGAITLLIGFVLMPVVVSLLLLFYFFNLLSIFSNLAHSILCPFPLDSP
KPKDVSAGEFLCFFLRFRLSNSVVLFCLEVNQ