; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012110 (gene) of Snake gourd v1 genome

Gene IDTan0012110
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4283 domain-containing protein
Genome locationLG08:37518748..37519062
RNA-Seq ExpressionTan0012110
SyntenyTan0012110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]4.4e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
KAA0049770.1 hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa]3.7e-1650Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + SVVG+P+ LD A    +RL++ARVC+E+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS   CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]3.7e-1651.81Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR-AEGKV
        + S VG+P+ LD AT +  RL++ARVCV++  D  +P E+ V +RGVDF V + Y W+P KC+ CCVFGHS G C R  E KV
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR-AEGKV
TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]4.4e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]4.4e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013952.1e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
A0A5A7TWG5 Reverse transcriptase domain-containing protein2.1e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
A0A5A7U3C2 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein1.8e-1650Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + SVVG+P+ LD A    +RL++ARVC+E+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS   CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein1.8e-1651.81Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR-AEGKV
        + S VG+P+ LD AT +  RL++ARVCV++  D  +P E+ V +RGVDF V + Y W+P KC+ CCVFGHS G C R  E KV
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR-AEGKV
A0A5D3D5X6 Reverse transcriptase domain-containing protein2.1e-1751.28Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
        + S VG+P+ LD AT +  RL++ARVCVE+     +P E+ V +RGVDF V V Y W+P+KC+ CC FGHS  +CSR+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding2.2e-0635.62Show/hide
Query:  VGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR
        +GRP+ +D  T + ++  FARVC+EV +   L   V+++      R  V Y    K CS+C ++GH + SC R
Subjt:  VGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR
AT5G32613.1 Zinc knuckle (CCHC-type) family protein1.6e-0429.49Show/hide
Query:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVH-MRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR
        + S +G P+  +K+      +   +V V   +   LP+ ++V  ++G   RV V Y   P KC NC  +GH +  CS+
Subjt:  MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVH-MRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTGTTGTTGGTCGTCCTGTGTGCTTAGATAAGGCAACAGGGGATTTGAATAGATTGGCATTTGCTCGTGTTTGTGTTGAGGTACGGGTTGATGATGGCTTACC
GAATGAGGTGATTGTCCACATGCGGGGGGTTGATTTTAGAGTGGGGGTGGAGTATTCATGGCGACCGAAGAAGTGTTCTAACTGTTGTGTGTTTGGACATTCTATGGGTT
CTTGTTCCCGTGCTGAGGGTAAGGTTGGTTCATCAGGCGGGGCTGGGGCGGCTGGGAGGGTTGGGGGGAAGGTGAGTGTTGGAGGTGTGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTGTTGTTGGTCGTCCTGTGTGCTTAGATAAGGCAACAGGGGATTTGAATAGATTGGCATTTGCTCGTGTTTGTGTTGAGGTACGGGTTGATGATGGCTTACC
GAATGAGGTGATTGTCCACATGCGGGGGGTTGATTTTAGAGTGGGGGTGGAGTATTCATGGCGACCGAAGAAGTGTTCTAACTGTTGTGTGTTTGGACATTCTATGGGTT
CTTGTTCCCGTGCTGAGGGTAAGGTTGGTTCATCAGGCGGGGCTGGGGCGGCTGGGAGGGTTGGGGGGAAGGTGAGTGTTGGAGGTGTGATGTGA
Protein sequenceShow/hide protein sequence
MTSVVGRPVCLDKATGDLNRLAFARVCVEVRVDDGLPNEVIVHMRGVDFRVGVEYSWRPKKCSNCCVFGHSMGSCSRAEGKVGSSGGAGAAGRVGGKVSVGGVM