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Tan0012117 (gene) of Snake gourd v1 genome

Gene IDTan0012117
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S acidic ribosomal protein P2-like
Genome locationLG04:5965038..5967071
RNA-Seq ExpressionTan0012117
SyntenyTan0012117
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022945075.1 60S acidic ribosomal protein P2-2-like [Cucurbita moschata]6.8e-4391.38Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGNS PSAKDLK+ILGSVGAE+D++KIELLLSSVKGKDVTELIASGREKLASVPSGGGA MAVAAGGGGGGG  AAPAA E KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]6.8e-4390.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGN+ PSAKDLKDILGSVGAE+DEDKIELL+SSVKGKD+TELIASGREKLASVPSGGGA +AVAA GGGGG  AAAPAAAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

XP_022968573.1 60S acidic ribosomal protein P2-2-like [Cucurbita maxima]2.0e-4290.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGNS PSAKDLK+ILGSVGAE+D++KIELLLSSVKGKDVTELIASGREKLASVPSGGGA MAVAAGGGGGGG  A PAA E KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

XP_022984367.1 60S acidic ribosomal protein P2-4-like [Cucurbita maxima]6.8e-4390.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGN+ PSAKDLKDILGSVGAE+DEDKIELL+SSVKGKD+TELIASGREKLASVPSGGGA +AVAA GGGGG  AAAPAAAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

XP_023541212.1 60S acidic ribosomal protein P2-2-like [Cucurbita pepo subsp. pepo]1.5e-4290.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGNS PSAKDLK+ILGSVGAE+D+++IELLLSSVKGKDVTELIASGREKLASVPSGGGA MAVAAGGGGGGG  AAPAA E KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A1S3BFW0 60S acidic ribosomal protein P2-4-like1.3e-4290.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGN+ PSAKDLKDILGSVGAEIDE++IELLLS+VKGKDVTELIASGREKLASVPSGGGA +AVAAGGGGGG  AAAPA AE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

A0A6J1FZV9 60S acidic ribosomal protein P2-2-like3.3e-4391.38Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGNS PSAKDLK+ILGSVGAE+D++KIELLLSSVKGKDVTELIASGREKLASVPSGGGA MAVAAGGGGGGG  AAPAA E KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like3.3e-4390.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGN+ PSAKDLKDILGSVGAE+DEDKIELL+SSVKGKD+TELIASGREKLASVPSGGGA +AVAA GGGGG  AAAPAAAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

A0A6J1HYE9 60S acidic ribosomal protein P2-2-like9.6e-4390.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGNS PSAKDLK+ILGSVGAE+D++KIELLLSSVKGKDVTELIASGREKLASVPSGGGA MAVAAGGGGGGG  A PAA E KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like3.3e-4390.52Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MKIVAAYLLAVLGGN+ PSAKDLKDILGSVGAE+DEDKIELL+SSVKGKD+TELIASGREKLASVPSGGGA +AVAA GGGGG  AAAPAAAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
P41099 60S acidic ribosomal protein P21.3e-3372.41Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK++AA+LLA+LGGN+ P+ +DLK IL SVGA+ D+DKIELLLS VKGKD+TELIASGRE+LASVPSGGG  +AVAA  GGGGG A A AA EPKKEEK 
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        E  EESD+++GFSLFD
Subjt:  EEKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A4.8e-3172.41Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK VAAYLLAVL GN+ PSA DL  IL SVG E+D +K+ELLLS + GKD+TELIA+GREK ASVP GGG V AVAA     GGAA    AAE KKEEKV
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLFD
Subjt:  EEKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-16.6e-3370.69Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK+VAA+LLAVL G + P+  D+KDILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGG   AP AAE KKEEK 
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9LXM8 60S acidic ribosomal protein P2-44.8e-3168.97Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK+ AA+LLAVLGGN+ PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG  +AV+A    GGG AAAPA    KKE K 
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-21.1e-3270.59Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE
        MK+VAAYLLAVL G + P++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA   +GGGGGGGA    +AAE KKE
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE

Query:  EKVEEKEESDDDMGFSLFD
        EK EEKEESDDDMGFSLF+
Subjt:  EKVEEKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family8.0e-3470.59Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE
        MK+VAAYLLAVL G + P++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA   +GGGGGGGA    +AAE KKE
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE

Query:  EKVEEKEESDDDMGFSLFD
        EK EEKEESDDDMGFSLF+
Subjt:  EKVEEKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family8.0e-3470.59Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE
        MK+VAAYLLAVL G + P++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA   +GGGGGGGA    +AAE KKE
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE

Query:  EKVEEKEESDDDMGFSLFD
        EK EEKEESDDDMGFSLF+
Subjt:  EKVEEKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family8.0e-3470.59Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE
        MK+VAAYLLAVL G + P++ D+K ILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA   +GGGGGGGA    +AAE KKE
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVA---AGGGGGGGAAAAPAAAEPKKE

Query:  EKVEEKEESDDDMGFSLFD
        EK EEKEESDDDMGFSLF+
Subjt:  EKVEEKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family4.7e-3470.69Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK+VAA+LLAVL G + P+  D+KDILGSVGAE ++ +IELLL  VKGKD+ ELIA+GREKLASVPSGGG  +AVA+   GGGG   AP AAE KKEEK 
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family3.4e-3268.97Show/hide
Query:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV
        MK+ AA+LLAVLGGN+ PSA ++KDI+G+VGA++D + IELLL  V GKD+ ELIASGREKLASVPSGGG  +AV+A    GGG AAAPA    KKE K 
Subjt:  MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCGTAGCTGCATATTTGCTTGCCGTTTTGGGAGGCAACTCCTGCCCTTCTGCTAAAGACTTGAAGGATATTCTTGGATCTGTTGGAGCTGAAATTGACGAGGA
CAAAATTGAGCTTCTGTTGTCGAGTGTGAAGGGGAAGGATGTTACAGAGCTCATTGCATCCGGAAGAGAAAAACTAGCATCTGTTCCTTCCGGTGGAGGTGCTGTCATGG
CTGTTGCCGCTGGAGGTGGCGGTGGGGGTGGTGCAGCTGCTGCCCCAGCTGCAGCCGAGCCGAAGAAAGAGGAGAAGGTTGAAGAGAAGGAAGAGTCAGACGATGATATG
GGTTTCAGTCTCTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
GCGCTTCTCAACATCACATAAGGAAAACAATCAGAAACCCTACCTCTCTCCACTATATAACGTAATAAGAAGCCTTCAACAACATTTACAGAACCCTAACTAAACTCTCT
CTCTCCTTATCTCTGTTCCTTTTGCGATTTGCTGTCTGCGAAGGATGAAGATCGTAGCTGCATATTTGCTTGCCGTTTTGGGAGGCAACTCCTGCCCTTCTGCTAAAGAC
TTGAAGGATATTCTTGGATCTGTTGGAGCTGAAATTGACGAGGACAAAATTGAGCTTCTGTTGTCGAGTGTGAAGGGGAAGGATGTTACAGAGCTCATTGCATCCGGAAG
AGAAAAACTAGCATCTGTTCCTTCCGGTGGAGGTGCTGTCATGGCTGTTGCCGCTGGAGGTGGCGGTGGGGGTGGTGCAGCTGCTGCCCCAGCTGCAGCCGAGCCGAAGA
AAGAGGAGAAGGTTGAAGAGAAGGAAGAGTCAGACGATGATATGGGTTTCAGTCTCTTCGATTAAGTATAATGACAATGTCGAATGTTGTTCAGAGATTCTTCAAGATTT
TAGATTGGAATTTTTGTTTTTCACATGTAGCCTTTTAACATTATCGTGTTGTTATGATGAGCCAAATGTTATATTTCTTTTCAGTCAATGAATTTCATCGTAATTTTTGG
ATGCTATAAAACATCTGTTATATTATATGAAAAGAGGAATTGTGCTGGCATGAGTTTGTATCGGAGGCCGTTGTGATTTTTCTGTTGCGGTTCCCTCTGCAACAACCGAC
GTTCATTTCCACAATGAACCGGGACGGGGGATGGCTTCTTGGACTTGGTTTCTCACAAGGAGAAAGAGTAAGGGCTAAGGGTGGATGCCAGAAGAGAAGGGTAAATTTCA
TACACATAATGGTTACGTTTTTGTTTTTTGAAAATTAATTTTACTATTGTAGCTTAGCTCTACAATGATTCTCATTTTC
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNSCPSAKDLKDILGSVGAEIDEDKIELLLSSVKGKDVTELIASGREKLASVPSGGGAVMAVAAGGGGGGGAAAAPAAAEPKKEEKVEEKEESDDDM
GFSLFD