CuGenDBv2

Gene ID	Tan0012141
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Superoxide dismutase
Genome location	LG05:3798888..3808671
RNA-Seq Expression	Tan0012141
Synteny	Tan0012141
Gene Ontology terms	GO:0006801 - superoxide metabolic process (biological process) GO:0004784 - superoxide dismutase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001189 - Manganese/iron superoxide dismutase IPR019831 - Manganese/iron superoxide dismutase, N-terminal IPR019832 - Manganese/iron superoxide dismutase, C-terminal IPR036314 - Manganese/iron superoxide dismutase, C-terminal domain superfamily IPR036324 - Manganese/iron superoxide dismutase, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAF8397121.1 hypothetical protein HHK36_016028 [Tetracentron sinense]

4.5e-36

52.38

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLL--------PPAHGTLRAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD AMA+G SS  V+LQSAIKF+GGGHINHSIFWKNL         PP H    AID HFGS +  ++ +IN E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLL--------PPAHGTLRAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERPA------LVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WL  D E +RL  ETT  + P       LVPLLGID         YKN + +YL N+WK+MN
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERPA------LVPLLGID---------YKNEKLEYLMNIWKIMN

KAG8390166.1 hypothetical protein BUALT_Bualt01G0055200 [Buddleja alternifolia]

3.1e-37

54.17

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P  G L  AID HFGSLD  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WL  DI+ +RL  ETT      + + P+LVPLLGID         YKN + EYL NIWKIMN
Subjt:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN

QBC35995.1 superoxide dismutase SOD [Gerbera jamesonii]

3.5e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P HG+L RAID +FGS++  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +RL  ETT      + + P LVPL+GID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN

XP_021810589.1 superoxide dismutase [Mn], mitochondrial-like [Prunus avium]

2.0e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++NFN+AL+ LD+AMA+G S   V+LQSAIKF+GGGHINHS+FWKNL P       P  G+L RA++  FGSLD  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D +Q+RLS ETT  + P      + VPLLGID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

XP_024979965.1 superoxide dismutase [Mn], mitochondrial-like [Cynara cardunculus var. scolymus]

4.5e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P HG+L  AID HFGS++  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +RL  ETT  + P      +LVPL+GID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

TrEMBL top hits

e value

%identity

Alignment

A0A103YIZ3 Superoxide dismutase

2.2e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P HG+L  AID HFGS++  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +RL  ETT  + P      +LVPL+GID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

A0A251NK08 Superoxide dismutase

2.9e-36

50.6

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLL--------PPAHGTLRAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++NFN AL+ LD+AMA+G S   V+LQSAIKF+GGGHINHS+FWKNL         PP     RA++  FGSLD  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLL--------PPAHGTLRAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D +Q+RLS ETT  + P      + VPLLGID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

A0A411JIA3 Superoxide dismutase

1.7e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P HG+L RAID +FGS++  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +RL  ETT      + + P LVPL+GID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN

A0A4D6K494 Superoxide dismutase

2.9e-36

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QLD A+A+G +S AV+LQSAIKF+GGGH+NHSIFWKNL P       P HG+L  AID HFGS++  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +RL  ETT  + P      +LVPL+GID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

A0A6P5S4L5 Superoxide dismutase

9.8e-37

51.79

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++NFN+AL+ LD+AMA+G S   V+LQSAIKF+GGGHINHS+FWKNL P       P  G+L RA++  FGSLD  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D +Q+RLS ETT  + P      + VPLLGID         YKN + +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

SwissProt top hits

e value

%identity

Alignment

O49066 Superoxide dismutase [Mn], mitochondrial

6.8e-35

48.81

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N+AL QL  A+ +G S    +LQ AIKF+GGGHINHS+FWKNL P       P  G+L  AID +FGSL+  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WL  D E +RL  ETT      +++ P LVPLLGID         YKN K +YL NIWK++N
Subjt:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN

O81235 Superoxide dismutase [Mn] 1, mitochondrial

9.5e-37

48.21

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQ+HH+KHHQ Y++N+N+AL+QLD+A+ +G +S  V+LQSAIKF+GGGH+NHSIFWKNL P       P  G+L  AID HFGSL+ G++ +++ E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WL  D E ++L  +TT  + P      +LVPL+GID         YKN + EYL N+WK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

P09233 Superoxide dismutase [Mn] 3.1, mitochondrial

1.0e-35

48.81

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        M+LHH+KHH  Y++N+N AL+QL+ A+++G +S  VQLQ+AIKF+GGGH+NHSIFWKNL P       P HG L  AID  FGS +  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E +++S ETT  + P      +LVPLLGID         YKN + +YL NIWK+MN
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

P35017 Superoxide dismutase [Mn], mitochondrial

1.0e-35

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLPP-------AHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        MQLHH+KHHQ Y++N+N AL+QL+ A+ +G S+  V+LQSAIKF+GGGH+NHSIFWKNL P         HG+L  AID  FGSL+  ++  +N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLPP-------AHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E ++L  ETT      + + P LVPLLGID         YKN + +YL NIWK+MN
Subjt:  ALDGWLWLARDIEQRRLSFETT------LMERPALVPLLGID---------YKNEKLEYLMNIWKIMN

P41980 Superoxide dismutase [Mn] 3.4, mitochondrial

1.2e-36

50.6

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE
        M+LHH+KHH  Y+ N+N AL+QLD A+A+G +S  VQLQ AIKF+GGGH+NHSIFWKNL P       P HG L  AID  FGS +  ++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTLR-AIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WLA D E ++LS ETT  + P      +LVPLLGID         YKN + +YL NIWK+MN
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

Arabidopsis top hits

e value

%identity

Alignment

AT3G10920.1 manganese superoxide dismutase 1

6.7e-38

48.21

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQ+HH+KHHQ Y++N+N+AL+QLD+A+ +G +S  V+LQSAIKF+GGGH+NHSIFWKNL P       P  G+L  AID HFGSL+ G++ +++ E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+WL  D E ++L  +TT  + P      +LVPL+GID         YKN + EYL N+WK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

AT3G10920.2 manganese superoxide dismutase 1

2.2e-36

48.21

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        MQ+HH+KHHQ Y++N+N+AL+QLD+A+ +G +S  V+LQSAIKF+GGGH+NHSIFWKNL P       P  G+L  AID HFGSL+ G++ +++ E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN
           GW WL  D E ++L  +TT  + P      +LVPL+GID         YKN + EYL N+WK++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERP------ALVPLLGID---------YKNEKLEYLMNIWKIMN

AT3G56350.1 Iron/manganese superoxide dismutase family protein

2.4e-35

47.62

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Query:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE
        M+LHH+KHHQ Y++ +N AL+ L  AMA+G  S  V+LQS IKF+GGGH+NH+IFWKNL P       P H  L  AID HFGSL+ G++ ++N E    
Subjt:  MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLP-------PAHGTL-RAIDGHFGSLDIGILGQINGEVLQE

Query:  ALDGWLWLARDIEQRRLSFETTLMERPA------LVPLLGID---------YKNEKLEYLMNIWKIMN
           GW+W   D E +RL  ETT  + P       LVPL+GID         YKN + EYL NIW ++N
Subjt:  ALDGWLWLARDIEQRRLSFETTLMERPA------LVPLLGID---------YKNEKLEYLMNIWKIMN

Sequences

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CDS sequence

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ATGCAACTGCATCACCGAAAACATCATCAAATGTATCTTTCAAACTTCAACGACGCTCTCGACCAGCTCGATCGAGCCATGGCTGAGGGACGCTCTTCTGTTGCTGTTCA
ATTGCAGAGCGCAATCAAATTCGATGGCGGTGGTCATATCAACCATTCAATTTTCTGGAAAAATCTACTTCCACCTGCACATGGTACTTTACGAGCTATTGATGGTCATT
TTGGGTCGTTGGATATTGGAATCCTTGGTCAGATCAATGGAGAAGTTCTCCAGGAGGCTCTAGATGGGTGGCTATGGCTTGCTCGTGATATAGAGCAGAGGAGGCTCTCT
TTTGAAACCACTTTAATGGAAAGACCTGCTTTAGTTCCTTTGCTCGGGATAGATTACAAGAATGAGAAATTGGAATATCTAATGAACATATGGAAGATAATGAACTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MQLHHRKHHQMYLSNFNDALDQLDRAMAEGRSSVAVQLQSAIKFDGGGHINHSIFWKNLLPPAHGTLRAIDGHFGSLDIGILGQINGEVLQEALDGWLWLARDIEQRRLS
FETTLMERPALVPLLGIDYKNEKLEYLMNIWKIMN

Tan0012141 (gene) of Snake gourd v1 genome