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Tan0012144 (gene) of Snake gourd v1 genome

Gene IDTan0012144
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionT2.14 protein
Genome locationLG05:74637673..74638173
RNA-Seq ExpressionTan0012144
SyntenyTan0012144
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2616419.1 hypothetical protein D8674_023007 [Pyrus ussuriensis x Pyrus communis]7.3e-0636.36Show/hide
Query:  EWKEMIVAICVSSAIAIAAVSVQI-EKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYL
        +W ++IVA C+S+AI +A + +Q+   +LP  F FL +A+LL F  +   K  +  N   ++  + +  G F GVTA FI+  IP+  +F+   FLIY+
Subjt:  EWKEMIVAICVSSAIAIAAVSVQI-EKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYL

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]3.2e-1756.31Show/hide
Query:  GGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATA
        GG +    VA   AEMVEEWK+MI+  CVSSAI IA VSV I+ +LPN+F+ LS+A+LLCF  V F +M  +I     +S+ILYCVGG L  ++ FIATA
Subjt:  GGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATA

Query:  IPY
        IPY
Subjt:  IPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]5.9e-4873.62Show/hide
Query:  MGWFGNCIKKVSWLWELLEDEAEGGGGGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTIN
        M WF NCI K   LWE LED  EGGGGGG P  A AVA AEMVEEWK+MIVA CVSSAIAIA VSVQIEKKLP  F FLS+ LLLCFGFVAFGKMTK+I 
Subjt:  MGWFGNCIKKVSWLWELLEDEAEGGGGGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTIN

Query:  FKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYLIFCFIFMFINAHNHKASSSTP
         +  VS+ILYCVGG LGVTALFIA+AIPYA YFQIIIFLIYLIF  +FM +    HK+SSS P
Subjt:  FKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYLIFCFIFMFINAHNHKASSSTP

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]8.6e-1550.88Show/hide
Query:  VAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQII
        V+  EM+ +W+ M+V  C+ +AIAIA VSVQI+ KL   F+FLS AL+ CF F    K+ K       VS ILY +GGF  VTA FIA AIPYA +FQI+
Subjt:  VAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQII

Query:  IFLIYLIFCFIFMF
           +YL+F FI  F
Subjt:  IFLIYLIFCFIFMF

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]2.4e-0960.56Show/hide
Query:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQIL
        VAEMVEE KEMI+  C+SSAI IA VSVQ + KLPN+F+FLS+A+L+CF  V F +M  +I FK+ +S+IL
Subjt:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein3.8e-2457.38Show/hide
Query:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIF
        VAEMVEE KEMI+  C+SSAI IA VSVQ + KLPN+F+FLS+A+L+CF  V F +M  +I FK+ +S+ILYC GGFL  T  FIATAIPY  +F II+ 
Subjt:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIF

Query:  LIYLIFCFIFMFINAHNHKASS
        ++Y IFC IF+ + +  H  SS
Subjt:  LIYLIFCFIFMFINAHNHKASS

A0A0A0LEV1 Uncharacterized protein2.9e-0835.94Show/hide
Query:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIF
        VA+MVEE K  I+    +   AIAA+SVQ + KLP++F+F+S+  LLC        M    +FK+  +++LY +G F  +T+  IA AIP   YF +++ 
Subjt:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIF

Query:  LIYLIFCFIFMFINAHNHKASSSTPPQL
        L++LI C   + + ++     +ST   L
Subjt:  LIYLIFCFIFMFINAHNHKASSSTPPQL

A0A0A0LQB6 Uncharacterized protein8.6e-4567.08Show/hide
Query:  WFGNCIKKVSWLWELLEDEAEGGGGGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIE--KKLPNAFKFLSVALLLCFGFVAFGKMTKTIN
        W G+CI+K   LWE L+ E E G  GG     + + VAEMVEEWKEMIVA+CVSSAI IA VSVQIE  K+LP  F+FLS+ +LLCFGFV F KMTK I 
Subjt:  WFGNCIKKVSWLWELLEDEAEGGGGGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIE--KKLPNAFKFLSVALLLCFGFVAFGKMTKTIN

Query:  FKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYLIFCFIFMFINA-HNHKASS
        FK+ VS+ILYCVGGFLGVTA FIATAIP+APYFQIIIF++YL+FCFIFM I   HN + SS
Subjt:  FKSVVSQILYCVGGFLGVTALFIATAIPYAPYFQIIIFLIYLIFCFIFMFINA-HNHKASS

A0A0A0LQP5 Uncharacterized protein7.6e-1748.46Show/hide
Query:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPY-APYFQIII
        VAE VEE KE I+ +CVSSAI I   SVQI+ KLPN+F+ LS+ +LLCF  V F +M +++ F++ +S+ILYCVG F+  T  FIATAI Y   +F  I+
Subjt:  VAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATAIPY-APYFQIII

Query:  FLIYLIFC-----FIFMFINAHNHKASSST
         ++Y IFC     FI      HN  +S S+
Subjt:  FLIYLIFC-----FIFMFINAHNHKASSST

A0A0A0LSX4 Uncharacterized protein3.1e-1856.07Show/hide
Query:  GGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATA
        GG +    VA   AEMVEEWK+MI+  CVSSAI IA VSV I+ +LPN+F+ LS+A+LLCF  V F +M  +I     +S+ILYCVGG L  ++ FIATA
Subjt:  GGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILYCVGGFLGVTALFIATA

Query:  IPYAPYF
        IPYA  F
Subjt:  IPYAPYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGTTTGGAAATTGCATAAAAAAGGTAAGTTGGTTATGGGAATTATTAGAGGACGAAGCGGAAGGCGGCGGTGGCGGGGGGAAACCGGAGATGGCGGTGGCGGT
GGCAGTGGCGGAGATGGTGGAGGAATGGAAAGAGATGATAGTAGCAATTTGCGTGTCGTCGGCCATAGCCATAGCTGCAGTGTCTGTTCAAATAGAAAAGAAACTGCCAA
ATGCGTTTAAGTTTCTATCAGTTGCTCTGTTGCTGTGTTTTGGTTTTGTGGCTTTTGGGAAGATGACGAAAACCATTAATTTCAAAAGTGTGGTCTCTCAGATTTTGTAC
TGTGTGGGCGGGTTTTTGGGAGTCACAGCTTTGTTCATAGCCACTGCAATTCCTTATGCGCCATATTTTCAGATCATCATCTTCCTCATTTACTTAATCTTCTGCTTCAT
CTTCATGTTCATTAATGCCCACAACCACAAGGCTTCTTCTTCCACTCCTCCTCAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGTTTGGAAATTGCATAAAAAAGGTAAGTTGGTTATGGGAATTATTAGAGGACGAAGCGGAAGGCGGCGGTGGCGGGGGGAAACCGGAGATGGCGGTGGCGGT
GGCAGTGGCGGAGATGGTGGAGGAATGGAAAGAGATGATAGTAGCAATTTGCGTGTCGTCGGCCATAGCCATAGCTGCAGTGTCTGTTCAAATAGAAAAGAAACTGCCAA
ATGCGTTTAAGTTTCTATCAGTTGCTCTGTTGCTGTGTTTTGGTTTTGTGGCTTTTGGGAAGATGACGAAAACCATTAATTTCAAAAGTGTGGTCTCTCAGATTTTGTAC
TGTGTGGGCGGGTTTTTGGGAGTCACAGCTTTGTTCATAGCCACTGCAATTCCTTATGCGCCATATTTTCAGATCATCATCTTCCTCATTTACTTAATCTTCTGCTTCAT
CTTCATGTTCATTAATGCCCACAACCACAAGGCTTCTTCTTCCACTCCTCCTCAGCTTTGA
Protein sequenceShow/hide protein sequence
MGWFGNCIKKVSWLWELLEDEAEGGGGGGKPEMAVAVAVAEMVEEWKEMIVAICVSSAIAIAAVSVQIEKKLPNAFKFLSVALLLCFGFVAFGKMTKTINFKSVVSQILY
CVGGFLGVTALFIATAIPYAPYFQIIIFLIYLIFCFIFMFINAHNHKASSSTPPQL