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Tan0012170 (gene) of Snake gourd v1 genome

Gene IDTan0012170
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich protein 5
Genome locationLG05:82988039..82988629
RNA-Seq ExpressionTan0012170
SyntenyTan0012170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446362.1 PREDICTED: glycine-rich cell wall structural protein [Cucumis melo]6.9e-1980.99Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGSLAFK+LWLVVL ALI  SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGG GGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

XP_011648421.1 glycine-rich cell wall structural protein [Cucumis sativus]2.8e-2081.82Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGS AFK+LWLVVL ALIW SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGGAGGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

XP_022994117.1 glycine-rich protein 5 [Cucurbita maxima]2.1e-2081.3Show/hide
Query:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG
        MGS LA KFLWL+VL ALI  SEPR LV  GG  G+EKTGYFQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGG GFG+GIGGL   GGGGFGGGGG
Subjt:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG

Query:  GGSGVLGSGAGGGAGGGFGGGLP
         GSGVLG GAGGGAGGGFGGGLP
Subjt:  GGSGVLGSGAGGGAGGGFGGGLP

XP_023542188.1 glycine-rich protein 23 [Cucurbita pepo subsp. pepo]1.8e-1980.16Show/hide
Query:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYG---GGGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGG
        MGS LA KFLWL+VL ALI  SEPR LV  GG  G+EKTGYFQFFPGYG   GGG G GGGGGGGGLGGGSGFGSGGGGGFG+GIGGL   GGGGFGGGG
Subjt:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYG---GGGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGG

Query:  GGGSGVLGSGA--GGGAGGGFGGGLP
        G GSGVLG GA  GGGAGGGFGGGLP
Subjt:  GGGSGVLGSGA--GGGAGGGFGGGLP

XP_038895952.1 glycine-rich cell wall structural protein-like [Benincasa hispida]1.8e-2282.93Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG
        MGSLAFKFLWLVVL ALIW SEPR LV +NGGEI +EKT  FQFFPG+GG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGL   GGGGFGGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG

Query:  GGSGVLGSGAGGGAGGGFGGGLP
        GG G+LG GAGGGAGGGFGGGLP
Subjt:  GGSGVLGSGAGGGAGGGFGGGLP

TrEMBL top hitse value%identityAlignment
A0A0A0LS00 Uncharacterized protein1.4e-2081.82Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGS AFK+LWLVVL ALIW SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGGAGGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

A0A1S3BEW4 glycine-rich cell wall structural protein3.3e-1980.99Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGSLAFK+LWLVVL ALI  SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGG GGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

A0A5D3BMG3 Glycine-rich cell wall structural protein3.3e-1980.99Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGSLAFK+LWLVVL ALI  SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGG GGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

A0A6J1JUT9 glycine-rich protein 51.0e-2081.3Show/hide
Query:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG
        MGS LA KFLWL+VL ALI  SEPR LV  GG  G+EKTGYFQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGG GFG+GIGGL   GGGGFGGGGG
Subjt:  MGS-LAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGL---GGGGFGGGGG

Query:  GGSGVLGSGAGGGAGGGFGGGLP
         GSGVLG GAGGGAGGGFGGGLP
Subjt:  GGSGVLGSGAGGGAGGGFGGGLP

E5GC63 Uncharacterized protein3.3e-1980.99Show/hide
Query:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG
        MGSLAFK+LWLVVL ALI  SEPR LV +NGGEI +EKT  FQFFPGYGG  GG GG GGGGGGGLGGGSGFGSGGGGGFG+GIGGLG GG GG GGGGG
Subjt:  MGSLAFKFLWLVVLSALIWGSEPRSLV-SNGGEIGNEKTGYFQFFPGYGG--GGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGG-GGGGG

Query:  SGVLGSGAGGGAGGGFGGGLP
         G+LG GAGGG GGGFGGGLP
Subjt:  SGVLGSGAGGGAGGGFGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTGGCTTTCAAATTCCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGGGGCTCAGAGCCCAGAAGCCTTGTTAGCAATGGGGGAGAGATTGGAAACGAAAA
GACAGGGTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGAGGCTTTGGTGGCGGTGGTGGCGGCGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTG
GAGGGGGGTTTGGGACTGGAATTGGGGGGCTCGGCGGTGGAGGATTCGGCGGAGGTGGTGGCGGTGGCAGTGGCGTTTTAGGCAGTGGAGCGGGTGGAGGAGCTGGTGGT
GGATTTGGAGGTGGACTGCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAGCAAACCCATATTCCTCAAGAATTATTGCTCATCAACAAGAAATGCATGGGAAAGTCCCAACTAAAAGGCAAGTTTGGGCTCTGTAAACTGCCCAAGCACGGA
TAATGAATGATATTTTTATGTCATTTCATCCATTTCTCTTCCTTTTTTCAGTTCAAAATGTTCTATAAATTCCTACACTCACAATTCCCAATTCCCATCAAAGAAATCAT
CCTTTAATACAAAAATCATGGGTTCTTTGGCTTTCAAATTCCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGGGGCTCAGAGCCCAGAAGCCTTGTTAGCAATGGGGGA
GAGATTGGAAACGAAAAGACAGGGTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGAGGCTTTGGTGGCGGTGGTGGCGGCGGCGGCGGTGGATTAGGTGGTGGTTCGGG
CTTTGGCAGTGGAGGTGGAGGGGGGTTTGGGACTGGAATTGGGGGGCTCGGCGGTGGAGGATTCGGCGGAGGTGGTGGCGGTGGCAGTGGCGTTTTAGGCAGTGGAGCGG
GTGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA
Protein sequenceShow/hide protein sequence
MGSLAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGGGGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGGGGGGGSGVLGSGAGGGAGG
GFGGGLP