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Tan0012188 (gene) of Snake gourd v1 genome

Gene IDTan0012188
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L29
Genome locationLG06:79748362..79749130
RNA-Seq ExpressionTan0012188
SyntenyTan0012188
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PSR92521.1 60S ribosomal protein like [Actinidia chinensis var. chinensis]2.7e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHNNKSGESATEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]2.7e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+A+EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

XP_023000056.1 60S ribosomal protein L29-1-like [Cucurbita maxima]1.2e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGES TEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

XP_038875270.1 60S ribosomal protein L29-1 [Benincasa hispida]1.2e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+A+EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]1.2e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+A+EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

TrEMBL top hitse value%identityAlignment
A0A2R6PJK9 60S ribosomal protein L291.3e-2296.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHNNKSGESATEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

A0A6J1H4N3 60S ribosomal protein L293.8e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ +EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

A0A6J1KET9 60S ribosomal protein L295.8e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGES TEEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

A0A6J1KHA4 60S ribosomal protein L291.3e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+A+EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

A0A6J1L4P4 60S ribosomal protein L293.8e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ +EEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L292.1e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L292.1e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-25.2e-2185.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

Q8HXB8 60S ribosomal protein L292.1e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-14.0e-2183.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family3.7e-2285.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

AT3G06680.2 Ribosomal L29e protein family3.7e-2285.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE+A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

AT3G06700.1 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

AT3G06700.2 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE

AT3G06700.3 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE+A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGTCGAAGAATCACACGGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCC
AAAGTTTCTTAGGAACCAGAGGTACGCGAAAAAACACAACAACAAGAGTGGCGAATCAGCTACTGAGGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
CCGTGACGAGGTGTTTGGTCGTCTAAAATAGGCTCAACTTCCTTCCCCTACGATTTACTGATTCGGCAGAAACCCTAGCTTGCACCGCAGTATCTCTCAGAGTCTCAAGA
TCAATGGCCAAGTCGAAGAATCACACGGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGA
CCCAAAGTTTCTTAGGAACCAGAGGTACGCGAAAAAACACAACAACAAGAGTGGCGAATCAGCTACTGAGGAAGAGTAAAGTAGAAGAATGTCATGAAGCGGCAAGTTTA
GGGTTTTTATGATACAAGTTTGATTTCCAATTGAACCTTTTGTGTTCTCTGTCTTTGTTCAGTTGCAGTCTTGTAATTTTGACTTTGTTGTAGGTAGCGAGTTCCATTTT
GATGTGGAAAACGTTGCTTCTACGGCCTGATTACAGCAATACATTATCTATTTTGCATTTTTAAGGTTCT
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE