; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012210 (gene) of Snake gourd v1 genome

Gene IDTan0012210
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAlpha-amylase
Genome locationLG03:68492616..68494096
RNA-Seq ExpressionTan0012210
SyntenyTan0012210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595177.1 hypothetical protein SDJN03_11730, partial [Cucurbita argyrosperma subsp. sororia]2.6e-9087.5Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR
        M AIT  +STK LIR T++NSRP +LSTMASHPSLV VGWNTRRRQ SKLSGVS PC R+  L PKSS+ENTDILPSED+PEDGVSLGTMKLPSDIDIA+
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR

Query:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        FEVLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
Subjt:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

XP_022962862.1 uncharacterized protein LOC111463229 [Cucurbita moschata]3.4e-9087.24Show/hide
Query:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF
        ++STK LIR T++NSRP +LSTMASHPSLV VGWNTRRRQ SKLSG+S PC R+  L PKSS+ENTDILPSED+PEDGVSLGTMKLPSDIDIA+FEVLLF
Subjt:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF

Query:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV
        QWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA V
Subjt:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV

XP_022972616.1 uncharacterized protein LOC111471157 [Cucurbita maxima]4.4e-9086.63Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR
        M AIT  +STK LIR T++NSRP +LSTMASHPSLV VGWNTRRRQ SKLSGVS PC R+  L PKSS+ENTDI PSED+PEDGVSLGTMKLPSDIDIA+
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR

Query:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        FEVLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
Subjt:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

Query:  QV
         V
Subjt:  QV

XP_023517184.1 uncharacterized protein LOC111781019 [Cucurbita pepo subsp. pepo]9.9e-9087.24Show/hide
Query:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF
        ++STK LIR T+++SRP +LSTMASHPSLV VGWNTRRRQ SKLSGVS PC R+  L PKSS+ENTDILPSED+PEDGVSLGTMKLPSDIDIA+FEVLLF
Subjt:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF

Query:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV
        QWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA V
Subjt:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV

XP_038881940.1 uncharacterized protein LOC120073272 [Benincasa hispida]2.2e-8983.66Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR
        M+AI  S+STKQ I  T++NSRPC+LS MASHPSLV V WNTR RQIS+ S +S PC R+ KLVPKSSDEN DI+PSEDDPEDGVSLGTMKLPSDIDIAR
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR

Query:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        F+VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDG+TEVLVYIDCLVFPATA+T+PIFRAIRNGRL+DQSPPGEPRIMRSLL ALKKSVEI+
Subjt:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

Query:  QV
        +V
Subjt:  QV

TrEMBL top hitse value%identityAlignment
A0A0A0KFD4 Uncharacterized protein1.9e-8683.25Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA
        MDAI  SYST Q IR  ++NSRPC+ S+M SH PSLV    NTR RQIS  S VSGPC R PKLVPKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIA
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA

Query:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI
        RF+VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI
Subjt:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI

Query:  AQV
        ++V
Subjt:  AQV

A0A1S3CH91 uncharacterized protein LOC1035009091.8e-8482.27Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA
        MDAI  SYST Q  R  ++NSRPC+LS M SH PSLV    NTR RQIS  S  SGPC R   LVPKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIA
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA

Query:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI
        RF+VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDG+TEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI
Subjt:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI

Query:  AQV
        ++V
Subjt:  AQV

A0A5A7SHD0 Uncharacterized protein1.8e-8482.27Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA
        MDAI  SYST Q  R  ++NSRPC+LS M SH PSLV    NTR RQIS  S  SGPC R   LVPKSSDEN DI+PSEDDPEDGVSLGTMKLP D DIA
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASH-PSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIA

Query:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI
        RF+VLLFQWANSLCQGANLPLPVPL+VDKIPSGVRLGFITIGDG+TEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLL ALKKSVEI
Subjt:  RFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEI

Query:  AQV
        ++V
Subjt:  AQV

A0A6J1HDQ9 uncharacterized protein LOC1114632291.6e-9087.24Show/hide
Query:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF
        ++STK LIR T++NSRP +LSTMASHPSLV VGWNTRRRQ SKLSG+S PC R+  L PKSS+ENTDILPSED+PEDGVSLGTMKLPSDIDIA+FEVLLF
Subjt:  SYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLF

Query:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV
        QWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA V
Subjt:  QWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV

A0A6J1I6G0 uncharacterized protein LOC1114711572.2e-9086.63Show/hide
Query:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR
        M AIT  +STK LIR T++NSRP +LSTMASHPSLV VGWNTRRRQ SKLSGVS PC R+  L PKSS+ENTDI PSED+PEDGVSLGTMKLPSDIDIA+
Subjt:  MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIAR

Query:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
        FEVLLFQWANSLCQGANLPLPVPLRVDKI SGVRLGFI+IGDG+TEVLVYIDCLVFPATAS+SPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA
Subjt:  FEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIA

Query:  QV
         V
Subjt:  QV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36145.1 unknown protein6.1e-4560.76Show/hide
Query:  QISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGD-GR
        Q+   +G + P      +V  +S  N  +   E   EDGVSLGTMKLP D D+ARFE LLFQWANSLCQGANLPLPVPL+VD+I  G RLGFI + D G+
Subjt:  QISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLFQWANSLCQGANLPLPVPLRVDKIPSGVRLGFITIGD-GR

Query:  TEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV
        T+V VYIDCLVF  T     +F+A RNGR KD++PPGE RIMRSLL ALKK+VEIA+V
Subjt:  TEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCATTACTTATTCTTATTCAACAAAGCAACTCATTCGTCTCACAAGTATCAATTCTCGGCCTTGTATGTTGTCTACAATGGCGTCTCATCCATCTCTGGTTTC
CGTCGGTTGGAACACTCGGCGTCGGCAAATCTCCAAGCTCTCCGGAGTCTCAGGTCCATGTTTTAGGCATCCGAAGCTGGTGCCCAAGTCTTCGGACGAGAACACAGATA
TATTGCCCTCAGAAGATGACCCTGAAGATGGAGTTTCGCTTGGGACCATGAAATTGCCTTCGGACATTGACATTGCAAGATTTGAGGTCTTACTCTTCCAGTGGGCCAAC
AGTCTTTGCCAGGGAGCTAACCTGCCGCTTCCAGTGCCTTTGAGGGTTGACAAAATACCCAGTGGAGTTAGACTTGGTTTTATCACAATTGGAGATGGAAGGACAGAAGT
TCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCACTAGTCCAATTTTTCGAGCCATAAGAAATGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGA
GAATTATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTCAAGTATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAACAGACCAACCGTCAAACCTTTCTCCTCACAGTGGCTTACCATCGCTGAAACACTATCCTCTCCTCTTGGACCTGCAAATTACTAGTAATCTCCATTTCCTTTC
TCTCTGCTATTCGCCGTCGGTTCTTCGCTATCAGATTCATGGACGCCATTACTTATTCTTATTCAACAAAGCAACTCATTCGTCTCACAAGTATCAATTCTCGGCCTTGT
ATGTTGTCTACAATGGCGTCTCATCCATCTCTGGTTTCCGTCGGTTGGAACACTCGGCGTCGGCAAATCTCCAAGCTCTCCGGAGTCTCAGGTCCATGTTTTAGGCATCC
GAAGCTGGTGCCCAAGTCTTCGGACGAGAACACAGATATATTGCCCTCAGAAGATGACCCTGAAGATGGAGTTTCGCTTGGGACCATGAAATTGCCTTCGGACATTGACA
TTGCAAGATTTGAGGTCTTACTCTTCCAGTGGGCCAACAGTCTTTGCCAGGGAGCTAACCTGCCGCTTCCAGTGCCTTTGAGGGTTGACAAAATACCCAGTGGAGTTAGA
CTTGGTTTTATCACAATTGGAGATGGAAGGACAGAAGTTCTCGTGTATATAGATTGCTTGGTTTTTCCTGCTACTGCCAGCACTAGTCCAATTTTTCGAGCCATAAGAAA
TGGACGCTTAAAGGACCAGTCACCTCCTGGTGAACCGAGAATTATGAGGAGTCTTTTGAGTGCTTTGAAAAAATCAGTTGAAATTGCTCAAGTATGAGTTAATTTGTCTT
TGTAAATGTAATAAACATGTCTTATCTTCTGTCATTAGGTGCTGTAAATGACTGTCAAGTGAAGATTCACTTCGAGTTCAGATCCTGCTCTCATTGTTTCTAGTAATTTT
ATTTTATTTTATTTTAATTTCAATTTTTGTTTTTAATTTTCATATACTTCTATTCAATGTGGCTTGAATTAAAAACACGTCTTTTTGC
Protein sequenceShow/hide protein sequence
MDAITYSYSTKQLIRLTSINSRPCMLSTMASHPSLVSVGWNTRRRQISKLSGVSGPCFRHPKLVPKSSDENTDILPSEDDPEDGVSLGTMKLPSDIDIARFEVLLFQWAN
SLCQGANLPLPVPLRVDKIPSGVRLGFITIGDGRTEVLVYIDCLVFPATASTSPIFRAIRNGRLKDQSPPGEPRIMRSLLSALKKSVEIAQV