; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012229 (gene) of Snake gourd v1 genome

Gene IDTan0012229
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPSI-G
Genome locationLG01:19516922..19518028
RNA-Seq ExpressionTan0012229
SyntenyTan0012229
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000549 - Photosystem I PsaG/PsaK protein
IPR016370 - Photosystem I PsaG/PsaK, plant
IPR017494 - Photosystem I PsaG, plant
IPR023618 - Photosystem I PsaG/PsaK domain, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596752.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6485Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA AASSSAVFAA + S A GRQQP+PSTIS+QGLRPLP + S RSL     KS+RS VVKAEL+  +VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG+THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

KAG7028289.1 Photosystem I reaction center subunit V, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-6584.43Show/hide
Query:  NLNTTSSAMATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQREN
        NLNTT  AMA AASSSAVFAA + S A GRQQP+PSTIS+QGLRPLP + S RSL     KS+RS VVKAEL+  +VISLSTGLSLFLGRFVFFNFQREN
Subjt:  NLNTTSSAMATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQREN

Query:  VSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF
        VSKQVPEQNG+THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF
Subjt:  VSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKF

XP_004149569.1 photosystem I reaction center subunit V, chloroplastic [Cucumis sativus]2.2e-6486.25Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA AASSSAVFAAP  SA   RQQP+P+TISFQGLR LP+V S RS+ AT  KSRRS  VKAEL+  LVISLSTGLSLFLGRFVFFNFQRENV KQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_022934047.1 photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]1.1e-6385Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA AASSSAVFAA + SA+ GRQQP+PSTIS+QGLRPLP + S RSL     KS RS VVKAEL+  +VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG+THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

XP_038903014.1 photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]3.8e-6485.62Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MATAASSSA+FAAP  SAA  RQQP+P+ +SFQGLR LP+V S R     A KSRRS VVKAEL+  LVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

TrEMBL top hitse value%identityAlignment
A0A0A0L4W3 PSI-G1.1e-6486.25Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA AASSSAVFAAP  SA   RQQP+P+TISFQGLR LP+V S RS+ AT  KSRRS  VKAEL+  LVISLSTGLSLFLGRFVFFNFQRENV KQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A1S3BKK6 PSI-G7.0e-6486.62Show/hide
Query:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL
        AASSSAVF AP  SA   RQQPSP+TISFQGLR LP+V S RS+ AT  K+RRS  VKAEL+  LVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL
Subjt:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL

Query:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A5D3CPR0 PSI-G7.0e-6486.62Show/hide
Query:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL
        AASSSAVF AP  SA   RQQPSP+TISFQGLR LP+V S RS+ AT  K+RRS  VKAEL+  LVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL
Subjt:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNGL

Query:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1F1K2 PSI-G5.4e-6485Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA AASSSAVFAA + SA+ GRQQP+PSTIS+QGLRPLP + S RSL     KS RS VVKAEL+  +VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG+THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

A0A6J1L2L3 PSI-G2.7e-6385Show/hide
Query:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
        MA  ASSSAVFAA + SAA  RQQP+PSTIS+QGLRPLP + S RSL   A KS RS VVKAEL+  +VISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ
Subjt:  MATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG+THFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

SwissProt top hitse value%identityAlignment
P12357 Photosystem I reaction center subunit V, chloroplastic4.7e-4967.47Show/hide
Query:  AMATAASSSAVFAAPALSAAGGRQQPSPSTI---SFQGLRPLPA-VTSRRSLTATAAKS-RRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVS
        A ATA+ SS + A  +      +QQ     +   SF GLRPL   ++S  S ++ +  S RRS   +AELS  LVISLSTGLSLFLGRFVFFNFQREN++
Subjt:  AMATAASSSAVFAAPALSAAGGRQQPSPSTI---SFQGLRPLPA-VTSRRSLTATAAKS-RRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVS

Query:  KQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        KQVPEQNG++HFEAGD RAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  KQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

P14224 Photosystem I reaction center subunit V, chloroplastic3.5e-1238.21Show/hide
Query:  LPAVTSRRSLTATAAKSRRSG-----VVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFN
        +  + SR SL A+A  + R       V KA L   +VIS ST   L +GRFVF  +QR      S   P+  G T+F+  D++     ++  +NDP GFN
Subjt:  LPAVTSRRSLTATAAKSRRSG-----VVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENV---SKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFN

Query:  IVDVLAWGSIGHIVAYYILATSS
        I+DV  WG++GH V + +LA +S
Subjt:  IVDVLAWGSIGHIVAYYILATSS

Q00327 Photosystem I reaction center subunit V, chloroplastic5.4e-4563.92Show/hide
Query:  AASSSAVFAAPALSAAGGRQQPSP-STISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG
        A S++AV + PA+  AG R  PSP +  SF+G+ P                +RRS   +A L   +VISLSTGLSL +GRFVFFNFQRENV+KQVPEQNG
Subjt:  AASSSAVFAAPALSAAGGRQQPSP-STISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQVPEQNG

Query:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
         THFEAGD RAKE+  +LKSNDPVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Subjt:  LTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9S7N7 Photosystem I reaction center subunit V, chloroplastic1.6e-4969.38Show/hide
Query:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSL--TATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +    S A   +  +P++ISF GLRPL    S  +L   +T  +   S VV+AELS  +VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSL--TATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Q9SPM4 Photosystem I reaction center subunit V, chloroplastic1.9e-1851.69Show/hide
Query:  VISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD
        +IS ST   L LGRFVF  FQR  VS+  +PEQNG+          + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Subjt:  VISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD

Arabidopsis top hitse value%identityAlignment
AT1G55670.1 photosystem I subunit G1.1e-5069.38Show/hide
Query:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSL--TATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ
        A S+SA+ +    S A   +  +P++ISF GLRPL    S  +L   +T  +   S VV+AELS  +VISLSTGLSLFLGRFVFFNFQRENV+KQ +PEQ
Subjt:  AASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSL--TATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQ

Query:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
        NG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Subjt:  NGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCTTCTTCCTTATCCTCATTCCTCCCTCAATTATCCATTCAAAAATCTCAACACAACATCATCAGCAATGGCCACCGCCGCCTCCTCCTCCGCCGTCTTCGCCGC
CCCAGCCTTGTCCGCTGCGGGCGGGAGGCAGCAGCCGAGCCCCTCGACCATATCATTCCAAGGCCTCCGCCCTCTGCCGGCAGTGACATCCAGGCGCAGCCTCACCGCCA
CCGCTGCGAAGAGTCGGAGATCGGGCGTGGTGAAGGCGGAGCTGAGCGCACCTCTGGTGATAAGCCTGAGCACAGGGCTGTCACTGTTCTTAGGGAGGTTCGTTTTCTTC
AACTTTCAGAGGGAGAACGTGAGCAAGCAAGTGCCGGAGCAGAACGGGCTGACCCATTTCGAGGCTGGCGATGTGAGGGCTAAGGAATATGTGAGCCTGTTGAAATCTAA
TGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTACATCTTGGCCACTTCTAGCAATGGCTATGATCCCAAGTTCT
TCTAG
mRNA sequenceShow/hide mRNA sequence
AAAATCTCTAATCTAGAAGTAGCCAATCAAAGCCCTCCAAGTCACCTCCCAAAATCCTCCATTCCCTCCATCTCATCCTCACAATCTATATCTCTCTTCTCAACCTCCTC
TGTTATTCCAAATATATGATCCTTCTTCCTTATCCTCATTCCTCCCTCAATTATCCATTCAAAAATCTCAACACAACATCATCAGCAATGGCCACCGCCGCCTCCTCCTC
CGCCGTCTTCGCCGCCCCAGCCTTGTCCGCTGCGGGCGGGAGGCAGCAGCCGAGCCCCTCGACCATATCATTCCAAGGCCTCCGCCCTCTGCCGGCAGTGACATCCAGGC
GCAGCCTCACCGCCACCGCTGCGAAGAGTCGGAGATCGGGCGTGGTGAAGGCGGAGCTGAGCGCACCTCTGGTGATAAGCCTGAGCACAGGGCTGTCACTGTTCTTAGGG
AGGTTCGTTTTCTTCAACTTTCAGAGGGAGAACGTGAGCAAGCAAGTGCCGGAGCAGAACGGGCTGACCCATTTCGAGGCTGGCGATGTGAGGGCTAAGGAATATGTGAG
CCTGTTGAAATCTAATGATCCTGTTGGGTTTAATATTGTTGATGTTCTTGCTTGGGGCTCTATTGGCCATATTGTTGCTTATTACATCTTGGCCACTTCTAGCAATGGCT
ATGATCCCAAGTTCTTCTAGTGGGTGTTTCGTCTCTTTTAATTTCCATGTCTTTTTTTGTGCTTTGTATAGGTACTAATTATTGCTCTGCTCTGCTTTGTTTTTTTTTTT
TATCTTTAATGGGGGTTTTTAGTGGAGATTTGATTGGAAATATTGCGTACGTATGTTTATTATTGCTTGACTCCTTATTTTGTGAAGCATCGTTTTTCTCTCGTATAAGT
TTAATTAATGAACTAGTAATGTCTGCATTATCAGGATCTTTAACTTTATATTTAAGTTATCATCTTATTTTCATTCTCTCAACTTTATGCATATAATATATAAAGATGAG
AAGACACTTTTTAACATCGTCGATCGCAATCAATTTCTCACTATTAATTAAAAACTACAATAAAACAAAGGGATATCTTGATGGTATAACTTTGATGTTAAGCCTTTTGC
ATGCGGA
Protein sequenceShow/hide protein sequence
MILLPYPHSSLNYPFKNLNTTSSAMATAASSSAVFAAPALSAAGGRQQPSPSTISFQGLRPLPAVTSRRSLTATAAKSRRSGVVKAELSAPLVISLSTGLSLFLGRFVFF
NFQRENVSKQVPEQNGLTHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF