; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012258 (gene) of Snake gourd v1 genome

Gene IDTan0012258
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationLG02:74785925..74789124
RNA-Seq ExpressionTan0012258
SyntenyTan0012258
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]4.6e-4833.49Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CL H     HSIEDC +FK  VQKL+DSK+L++ Q + Q++ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+  P   S+IQ PK M VE+P                                VGG+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDEEREI
        +RKGKA+E+  ED+  ++
Subjt:  QRKGKAVEIIDEDEEREI

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.1e-2569.23Show/hide
Query:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK
        E EE++ + YQE L VIN G+ EEVKE+RI TLA+EQD+ +LV LL E+ DIFAWSYQDM GL+T+IVTHRLPLK ECKPIRQKLRK+ P+
Subjt:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK

KAA0045605.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.5e-4846.02Show/hide
Query:  SNQRTLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHASPSKKTTREVSSSPKP
        ++  TLFQIL   GYLS R      + +G  N++ CLF+     HSIEDC +FK  VQKL+D+K+L+V Q + QE+ ++MIT  S +KKT+ E +S  KP
Subjt:  SNQRTLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHASPSKKTTREVSSSPKP

Query:  LIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIRQRKGKAVEIIDEDEER
        L+IHY+  P   S+IQ PK M +E+P PFAYKD+  +PWKYECQFIT+N   T     V G+TRSGRCY    LK +S+E+E+R+RKGKA+E+ DE+   
Subjt:  LIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIRQRKGKAVEIIDEDEER

Query:  EIVPYQEPLEVINLGSSEEVKEIRID
        E   + + L +      + V  + +D
Subjt:  EIVPYQEPLEVINLGSSEEVKEIRID

KAA0046608.1 uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]5.0e-6335.58Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+I IGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R        +G  N + CLFH     HSIEDC +FK  VQKL++SK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+      S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         VGG+TRSGRCY  + LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVAL
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K   I+ L     R+ +++L
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVAL

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]3.7e-6636.9Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CLFH     HSIEDC +FK  VQKL+DSK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+  P   S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         V G+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K I
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.4e-2872.53Show/hide
Query:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK
        E EE++ +PYQE L+VINLG+ EEVKE+RI TLA+EQD+ +LV LL E+ DIFAWSYQDMPGL+T+IVTHRLPLK ECKPIRQKLRK+ P+
Subjt:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.1e-6536.68Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKN RI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CLFH     HSIEDC +FK  VQKL+DSK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KP +IHY+  P   S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         VGG+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K I
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase2.2e-4833.49Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CL H     HSIEDC +FK  VQKL+DSK+L++ Q + Q++ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+  P   S+IQ PK M VE+P                                VGG+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDEEREI
        +RKGKA+E+  ED+  ++
Subjt:  QRKGKAVEIIDEDEEREI

A0A5A7SUT0 Reverse transcriptase5.3e-2669.23Show/hide
Query:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK
        E EE++ + YQE L VIN G+ EEVKE+RI TLA+EQD+ +LV LL E+ DIFAWSYQDM GL+T+IVTHRLPLK ECKPIRQKLRK+ P+
Subjt:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK

A0A5A7TUT4 Uncharacterized protein2.4e-6335.58Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+I IGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R        +G  N + CLFH     HSIEDC +FK  VQKL++SK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+      S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         VGG+TRSGRCY  + LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVAL
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K   I+ L     R+ +++L
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVAL

A0A5A7TW53 Gag-pro-like protein1.7e-4846.02Show/hide
Query:  SNQRTLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHASPSKKTTREVSSSPKP
        ++  TLFQIL   GYLS R      + +G  N++ CLF+     HSIEDC +FK  VQKL+D+K+L+V Q + QE+ ++MIT  S +KKT+ E +S  KP
Subjt:  SNQRTLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHASPSKKTTREVSSSPKP

Query:  LIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIRQRKGKAVEIIDEDEER
        L+IHY+  P   S+IQ PK M +E+P PFAYKD+  +PWKYECQFIT+N   T     V G+TRSGRCY    LK +S+E+E+R+RKGKA+E+ DE+   
Subjt:  LIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIRQRKGKAVEIIDEDEER

Query:  EIVPYQEPLEVINLGSSEEVKEIRID
        E   + + L +      + V  + +D
Subjt:  EIVPYQEPLEVINLGSSEEVKEIRID

A0A5A7VAU5 Uncharacterized protein1.8e-6636.9Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKNGRI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CLFH     HSIEDC +FK  VQKL+DSK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KPL+IHY+  P   S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         V G+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K I
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI

A0A5A7VAU5 Uncharacterized protein6.7e-2972.53Show/hide
Query:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK
        E EE++ +PYQE L+VINLG+ EEVKE+RI TLA+EQD+ +LV LL E+ DIFAWSYQDMPGL+T+IVTHRLPLK ECKPIRQKLRK+ P+
Subjt:  EDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLREYNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPK

A0A5A7VAU5 Uncharacterized protein5.2e-6636.68Show/hide
Query:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------
        M+GSASTNFSD+ITIGERIE+GVKN RI+D  P +  R+VMTPKKKEGEVHE+SS  RV T ++SP     +++ S Q GGQ+   QS QR         
Subjt:  MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQR---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA
                            TLFQIL   GYLS R      + +G  N + CLFH     HSIEDC +FK  VQKL+DSK+L++ Q + QE+ ++MIT+A
Subjt:  --------------------TLFQILCDVGYLSVRSEQSSIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHA

Query:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR
        S ++KT+ E +   KP +IHY+  P   S+IQ PK M VE+PGPFAYKD+ A+PWKYECQFITDN         VGG+TRSGRCY P+ LK +S+E+E+R
Subjt:  SPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKDSRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIR

Query:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI
        +RKGKA+E+  ED+                   + E+V  +E  E + L    E K I
Subjt:  QRKGKAVEIIDEDE-------------------EREIVPYQEPLEVINLGSSEEVKEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAAGTGCGTCCACAAATTTTTCTGACATCATAACAATCGGAGAAAGGATAGAGTATGGAGTTAAGAATGGGAGGATCGCAGACGCAACACCTGAGGCAAGTCT
GAGAAAGGTAATGACTCCAAAGAAGAAGGAGGGAGAGGTCCATGAGGTAAGCTCAGGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATA
ATCGTAGTCCTCAACTTGGAGGACAAAATCAACCGAATCAGTCAAATCAGCGTACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCGGTAAGGTCTGAGCAGAGT
AGCATAGATGATTTGGGTTTGCATAACGAGAAGATATGCCTTTTTCATAAAGGAATGGTCAGACATTCCATAGAAGATTGTGACGATTTTAAGCAGCATGTGCAAAAATT
ATTGGATTCAAAGTTATTGATTGTGAGCCAGACAGCTACACAGGAAATGAATATTGACATGATTACTCATGCGTCCCCCTCTAAGAAAACGACAAGAGAAGTGTCATCTT
CACCAAAACCATTAATCATTCACTATAAGAGTAATCCAGGTACCACTTCTCATATTCAAGTACCCAAGCCAATGATTGTAGAAGTGCCTGGTCCCTTTGCTTATAAGGAT
AGTCGGGCTATACCTTGGAAATACGAATGTCAGTTCATCACGGATAATGGTGCTCCTACACCTGATATCTTAGCAGTCGGAGGAATGACCCGTAGTGGTAGATGTTACAT
GCCAGAATTTTTGAAAAGTATTTCAAGAGAAGAGGAAATTAGACAACGTAAGGGCAAAGCTGTTGAGATAATCGACGAAGATGAAGAAAGAGAAATTGTGCCTTACCAAG
AGCCGCTAGAAGTAATCAATTTGGGGTCATCAGAGGAAGTAAAAGAAATACGAATCGACACTTTGGCTGCAGAGCAAGATCGTTTGGATCTTGTAGCCCTTCTACGTGAG
TACAACGACATATTTGCATGGTCTTACCAAGATATGCCTGGTCTGAATACAAAAATTGTAACCCATCGGTTACCGCTTAAAACCGAGTGTAAGCCCATAAGGCAAAAACT
GCGAAAAATGAACCCGAAATGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAAGTGCGTCCACAAATTTTTCTGACATCATAACAATCGGAGAAAGGATAGAGTATGGAGTTAAGAATGGGAGGATCGCAGACGCAACACCTGAGGCAAGTCT
GAGAAAGGTAATGACTCCAAAGAAGAAGGAGGGAGAGGTCCATGAGGTAAGCTCAGGACCAAGAGTTGTGACCCATATGACTTCACCAACTCAAAGACCTGCGAGTTATA
ATCGTAGTCCTCAACTTGGAGGACAAAATCAACCGAATCAGTCAAATCAGCGTACTCTCTTTCAAATTCTCTGCGATGTCGGATATCTTTCGGTAAGGTCTGAGCAGAGT
AGCATAGATGATTTGGGTTTGCATAACGAGAAGATATGCCTTTTTCATAAAGGAATGGTCAGACATTCCATAGAAGATTGTGACGATTTTAAGCAGCATGTGCAAAAATT
ATTGGATTCAAAGTTATTGATTGTGAGCCAGACAGCTACACAGGAAATGAATATTGACATGATTACTCATGCGTCCCCCTCTAAGAAAACGACAAGAGAAGTGTCATCTT
CACCAAAACCATTAATCATTCACTATAAGAGTAATCCAGGTACCACTTCTCATATTCAAGTACCCAAGCCAATGATTGTAGAAGTGCCTGGTCCCTTTGCTTATAAGGAT
AGTCGGGCTATACCTTGGAAATACGAATGTCAGTTCATCACGGATAATGGTGCTCCTACACCTGATATCTTAGCAGTCGGAGGAATGACCCGTAGTGGTAGATGTTACAT
GCCAGAATTTTTGAAAAGTATTTCAAGAGAAGAGGAAATTAGACAACGTAAGGGCAAAGCTGTTGAGATAATCGACGAAGATGAAGAAAGAGAAATTGTGCCTTACCAAG
AGCCGCTAGAAGTAATCAATTTGGGGTCATCAGAGGAAGTAAAAGAAATACGAATCGACACTTTGGCTGCAGAGCAAGATCGTTTGGATCTTGTAGCCCTTCTACGTGAG
TACAACGACATATTTGCATGGTCTTACCAAGATATGCCTGGTCTGAATACAAAAATTGTAACCCATCGGTTACCGCTTAAAACCGAGTGTAAGCCCATAAGGCAAAAACT
GCGAAAAATGAACCCGAAATGTTGA
Protein sequenceShow/hide protein sequence
MIGSASTNFSDIITIGERIEYGVKNGRIADATPEASLRKVMTPKKKEGEVHEVSSGPRVVTHMTSPTQRPASYNRSPQLGGQNQPNQSNQRTLFQILCDVGYLSVRSEQS
SIDDLGLHNEKICLFHKGMVRHSIEDCDDFKQHVQKLLDSKLLIVSQTATQEMNIDMITHASPSKKTTREVSSSPKPLIIHYKSNPGTTSHIQVPKPMIVEVPGPFAYKD
SRAIPWKYECQFITDNGAPTPDILAVGGMTRSGRCYMPEFLKSISREEEIRQRKGKAVEIIDEDEEREIVPYQEPLEVINLGSSEEVKEIRIDTLAAEQDRLDLVALLRE
YNDIFAWSYQDMPGLNTKIVTHRLPLKTECKPIRQKLRKMNPKC