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Tan0012283 (gene) of Snake gourd v1 genome

Gene IDTan0012283
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L29
Genome locationLG10:59206300..59207202
RNA-Seq ExpressionTan0012283
SyntenyTan0012283
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930218.1 60S ribosomal protein L29-1 [Cucurbita moschata]3.5e-2295Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]1.2e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

XP_023000056.1 60S ribosomal protein L29-1-like [Cucurbita maxima]3.5e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ T+EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

XP_038875270.1 60S ribosomal protein L29-1 [Benincasa hispida]2.0e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE A++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]5.4e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

TrEMBL top hitse value%identityAlignment
A0A6J1EUF7 60S ribosomal protein L291.7e-2295Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE

A0A6J1H4N3 60S ribosomal protein L291.7e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET ++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

A0A6J1KET9 60S ribosomal protein L291.7e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ T+EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

A0A6J1KHA4 60S ribosomal protein L295.8e-2395.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

A0A6J1L4P4 60S ribosomal protein L291.7e-2293.44Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET ++EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L291.6e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L291.6e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q84WM0 60S ribosomal protein L29-25.2e-2185.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

Q8HXB8 60S ribosomal protein L291.6e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q9M7X7 60S ribosomal protein L29-14.0e-2183.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family3.7e-2285.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

AT3G06680.2 Ribosomal L29e protein family3.7e-2285.25Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

AT3G06700.1 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

AT3G06700.2 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

AT3G06700.3 Ribosomal L29e protein family2.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ EE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACGGCGCACAATCAATCCCGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCC
GAAATTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTACTGACGAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
CCAATTTCCACAGCCCGTGAGTACCTTGGTCGTCTAAAATAGGCTCAACTTCCTTCCCTACGATTTACAGAGGCGGCAGAAACCCTAGCTTGCAGCATCCGCAGTATCTC
TCAAGAACAATGGCGAAGTCGAAGAATCACACGGCGCACAATCAATCCCGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGG
GATGGACCCGAAATTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTACTGACGAAGAGTAAAGTAGAGCGCCATGAAACGGCAAGT
TTAGGGTTTTTATGATATAAGTTTAATTTTCTATTGAACCTTTTGTGTTCTTTTTTGTTCAGTAGTAGTCAGCTTGTAATTTTGACTTTGTTGTAACGAGTTCCATTTCA
ATGTGGAAACCGTTGCTTCTTAGGCCTGGCTACGAAAAAACATTACCTGATTTGCATGTTTAAGGTTTCAACTATTGGTTACATCTCCATACATTATCATTTGTGCCATT
GATATCTTCAATTCACTCTTATTAGCTAAGGCATTATCATCTCTCTTTGTTCTCCTCTCTTACTACAACTGCATAAGACAGAATGTTTTT
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE