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Tan0012285 (gene) of Snake gourd v1 genome

Gene IDTan0012285
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:4945844..4946677
RNA-Seq ExpressionTan0012285
SyntenyTan0012285
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-1448.19Show/hide
Query:  TDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        T ++VKFS ASKEI +TK++G C ++G++G+ ET+  I   PM FFLN   K + +WF+KT +S++VIS+    +Y QYV+YF
Subjt:  TDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

XP_022155138.1 uncharacterized protein LOC111022279 [Momordica charantia]1.1e-1556.47Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSR-TVISILISELYAQYVIYF
        +TDSQV+F  A +EI+LTK+ G CVI G+QG+ E QFQ+ L PM FF+NL  + + IWF KT +SR TVI +     YAQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSR-TVISILISELYAQYVIYF

XP_022958857.1 uncharacterized protein LOC111460011 [Cucurbita moschata]2.6e-1255.95Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        +T S+VKF  AS+E ILTK+ G+CVI G++G+ E  FQI L+P  FF NL      IWF+KT DSR VI I    L AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]3.4e-1253.57Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        +T S+VKF  AS+E ILTK+ G+C +IG++G+ E  FQI L+P  FF NL      IWF+KT DSR VI +    L AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]6.9e-1357.14Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        +T SQVKF  AS+E ILTK+ G+CVI G++G+ E  FQI L+P  FF NL      IWF+KT DSR VI I    L AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

TrEMBL top hitse value%identityAlignment
A0A1S3CL88 uncharacterized protein LOC1035022503.7e-1250Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKT-NDSRTVISILISELYAQYVIYF
        +T+S+VKFS ASKEIILT+     + G + +VETQFQI+L PM FFLN   K + +WF+KT N++ T++ +    ++ QYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKT-NDSRTVISILISELYAQYVIYF

A0A6J1DM64 uncharacterized protein LOC1110222795.5e-1656.47Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSR-TVISILISELYAQYVIYF
        +TDSQV+F  A +EI+LTK+ G CVI G+QG+ E QFQ+ L PM FF+NL  + + IWF KT +SR TVI +     YAQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSR-TVISILISELYAQYVIYF

A0A6J1H2Z8 uncharacterized protein LOC1114600111.3e-1255.95Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        +T S+VKF  AS+E ILTK+ G+CVI G++G+ E  FQI L+P  FF NL      IWF+KT DSR VI I    L AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQCVI-GHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

A0A6J1KIW5 uncharacterized protein LOC1114948742.2e-1247.06Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKT-NDSRTVISILISELYAQYVIYF
        +T S+V+FS AS+E+I  K+ G+C ++GH G   T+F+IVL+PM FFLNL      +WF KT  ++  V+   + E++AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKT-NDSRTVISILISELYAQYVIYF

A0A6J1KZ05 uncharacterized protein LOC1114988871.7e-1253.57Show/hide
Query:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF
        +T S+VKF  AS+E ILTK+ G+C +IG++G+ E  FQI L+P  FF NL      IWF+KT DSR VI +    L AQYVIYF
Subjt:  MTDSQVKFSTASKEIILTKQNGQC-VIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGATTCACAAGTCAAATTCTCTACTGCATCTAAGGAGATTATCCTTACTAAACAGAATGGACAATGTGTAATAGGTCATCAAGGAAAGGTTGAAACTCAATTCCA
AATCGTTCTCCATCCAATGTCGTTTTTTCTTAATTTGATAAGTAAAGGGGATTGGATTTGGTTTTTTAAGACAAATGATTCTCGTACTGTAATCAGTATCCTAATTTCTG
AATTGTATGCTCAATATGTCATCTATTTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGATTCACAAGTCAAATTCTCTACTGCATCTAAGGAGATTATCCTTACTAAACAGAATGGACAATGTGTAATAGGTCATCAAGGAAAGGTTGAAACTCAATTCCA
AATCGTTCTCCATCCAATGTCGTTTTTTCTTAATTTGATAAGTAAAGGGGATTGGATTTGGTTTTTTAAGACAAATGATTCTCGTACTGTAATCAGTATCCTAATTTCTG
AATTGTATGCTCAATATGTCATCTATTTTTTCTAA
Protein sequenceShow/hide protein sequence
MTDSQVKFSTASKEIILTKQNGQCVIGHQGKVETQFQIVLHPMSFFLNLISKGDWIWFFKTNDSRTVISILISELYAQYVIYFF