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Tan0012311 (gene) of Snake gourd v1 genome

Gene IDTan0012311
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRoot meristem growth factor
Genome locationLG07:20299043..20300093
RNA-Seq ExpressionTan0012311
SyntenyTan0012311
Gene Ontology termsGO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045905.1 Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa]4.0e-1562.22Show/hide
Query:  MAVLPCKRILI---LILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA-----DDDLKIH---DEEH-FTNTDDLVAMDYTPASKKPPIHN
        MA+LPCKRILI   LIL+LL CFSNT  AARS+GV ++KN+   ++      DD  K+H   DEEH F++TDDL AMDYTPASKKPPIHN
Subjt:  MAVLPCKRILI---LILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA-----DDDLKIH---DEEH-FTNTDDLVAMDYTPASKKPPIHN

KAB1210353.1 hypothetical protein CJ030_MR6G024140 [Morella rubra]2.4e-0745.45Show/hide
Query:  AVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN
        AVLPCKR++++ LV+LC FSN   AARSL               D     ++    ++DDLV +DYTPA +KPPIHN
Subjt:  AVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN

KAG6571377.1 hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2173.61Show/hide
Query:  KRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN
        KR+L+L+LVLLC FSN   A RSLGVPQIK DDH  K +DDL +H+EEHF++TDDL AMDYTPASKKPPIHN
Subjt:  KRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN

KAG6605281.1 hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1868.35Show/hide
Query:  PCKR---ILILILVLLCCFSNTTFAARSL--GVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN
        PCKR   +L+++LVLL CFSNT   ARSL  GVPQIK DDH+ K D DL + DEEHF +T DLVAMDYT ASKKPPIHN
Subjt:  PCKR---ILILILVLLCCFSNTTFAARSL--GVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN

KGN62102.1 hypothetical protein Csa_006036 [Cucumis sativus]5.1e-1865.91Show/hide
Query:  MAVLPCKRIL---ILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA----DDDLKIH--DEEH-FTNTDDLVAMDYTPASKKPPIHN
        MA+LPCKRIL   +LILVLLCCFSN   AARS+GV ++KN+  N+K     DD  K+H  DEEH F++TDDL AMDYTPASKKPPIHN
Subjt:  MAVLPCKRIL---ILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA----DDDLKIH--DEEH-FTNTDDLVAMDYTPASKKPPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LMV6 Uncharacterized protein2.5e-1865.91Show/hide
Query:  MAVLPCKRIL---ILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA----DDDLKIH--DEEH-FTNTDDLVAMDYTPASKKPPIHN
        MA+LPCKRIL   +LILVLLCCFSN   AARS+GV ++KN+  N+K     DD  K+H  DEEH F++TDDL AMDYTPASKKPPIHN
Subjt:  MAVLPCKRIL---ILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA----DDDLKIH--DEEH-FTNTDDLVAMDYTPASKKPPIHN

A0A2N9HRC3 Uncharacterized protein5.7e-0743.59Show/hide
Query:  MAVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN
        MA +PCKR+++++L++LC FS T    R L  P       +Q   D+L    EE    +D+L+A DYTPA +KPPIHN
Subjt:  MAVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN

A0A5A7TWX6 Root meristem growth factor 9-like protein2.0e-1562.22Show/hide
Query:  MAVLPCKRILI---LILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA-----DDDLKIH---DEEH-FTNTDDLVAMDYTPASKKPPIHN
        MA+LPCKRILI   LIL+LL CFSNT  AARS+GV ++KN+   ++      DD  K+H   DEEH F++TDDL AMDYTPASKKPPIHN
Subjt:  MAVLPCKRILI---LILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA-----DDDLKIH---DEEH-FTNTDDLVAMDYTPASKKPPIHN

A0A6A1VC82 Uncharacterized protein1.1e-0745.45Show/hide
Query:  AVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN
        AVLPCKR++++ LV+LC FSN   AARSL               D     ++    ++DDLV +DYTPA +KPPIHN
Subjt:  AVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN

A0A6J5WGE6 Uncharacterized protein5.7e-0747.06Show/hide
Query:  MAVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA---DDDLKIHDEEHF----TNTDDLVAMDYTPASKKPPIHN
        MA +P K +L++  +LL CF + T   RSLGV    +DD +QK+    D  K  +E+H       ++DL+AMDYTPASKKPPIHN
Subjt:  MAVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKA---DDDLKIHDEEHF----TNTDDLVAMDYTPASKKPPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCTTCCATGCAAACGTATCCTCATCCTCATTCTCGTCCTTCTTTGTTGTTTCTCAAACACGACTTTTGCAGCAAGAAGTTTGGGAGTGCCTCAGATAAAGAA
TGATGATCACAATCAGAAAGCAGATGATGATCTTAAAATTCATGATGAAGAACATTTTACAAACACTGATGATTTGGTGGCTATGGATTATACTCCAGCCTCCAAGAAGC
CTCCAATCCACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCTTCCATGCAAACGTATCCTCATCCTCATTCTCGTCCTTCTTTGTTGTTTCTCAAACACGACTTTTGCAGCAAGAAGTTTGGGAGTGCCTCAGATAAAGAA
TGATGATCACAATCAGAAAGCAGATGATGATCTTAAAATTCATGATGAAGAACATTTTACAAACACTGATGATTTGGTGGCTATGGATTATACTCCAGCCTCCAAGAAGC
CTCCAATCCACAACTGA
Protein sequenceShow/hide protein sequence
MAVLPCKRILILILVLLCCFSNTTFAARSLGVPQIKNDDHNQKADDDLKIHDEEHFTNTDDLVAMDYTPASKKPPIHN