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Tan0012318 (gene) of Snake gourd v1 genome

Gene IDTan0012318
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:30628003..30628380
RNA-Seq ExpressionTan0012318
SyntenyTan0012318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605255.1 hypothetical protein SDJN03_02572, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2459.35Show/hide
Query:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT
        MD K VE+AKL  + KWAEADATFL+RLSLNK  TEI S S   SS   FET RNNEI  YSRQR+LRSY FSVE++K KRF KA+KW N KSR  ST++
Subjt:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT

Query:  SNHNNTTLSNHSCTSIFNFIFCC
        +N     +   S   IF F+ CC
Subjt:  SNHNNTTLSNHSCTSIFNFIFCC

KGN62030.1 hypothetical protein Csa_006081 [Cucumis sativus]2.4e-0948.96Show/hide
Query:  SKERKWAEADATFLKRLSLNK---------KRTEIPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEK--------QKPKRFDKAKKWLNSKS
        SK++KWAEADA FL++LSLNK         K+ E    SSS F FE YR+N+IINYSRQRYLRSY+F+ +         QK   F+K   +   KS
Subjt:  SKERKWAEADATFLKRLSLNK---------KRTEIPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEK--------QKPKRFDKAKKWLNSKS

XP_023006822.1 uncharacterized protein LOC111499491 [Cucurbita maxima]4.5e-2459.35Show/hide
Query:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT
        MD K V +AKL  + KWAEADATFL+RLSLNK  TEI SSS   SS   FET RNNEI  YSRQR+LRSY FSVE++K KRF KA+KW N KSR  ST++
Subjt:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT

Query:  SNHNNTTLSNHSCTSIFNFIFCC
        +N     +   S   I NF+ CC
Subjt:  SNHNNTTLSNHSCTSIFNFIFCC

TrEMBL top hitse value%identityAlignment
A0A0A0LJK1 Uncharacterized protein1.2e-0948.96Show/hide
Query:  SKERKWAEADATFLKRLSLNK---------KRTEIPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEK--------QKPKRFDKAKKWLNSKS
        SK++KWAEADA FL++LSLNK         K+ E    SSS F FE YR+N+IINYSRQRYLRSY+F+ +         QK   F+K   +   KS
Subjt:  SKERKWAEADATFLKRLSLNK---------KRTEIPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEK--------QKPKRFDKAKKWLNSKS

A0A2N9IEQ4 Uncharacterized protein5.5e-0435.38Show/hide
Query:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTE------IPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTS
        +D+ A  N    K  +W E+DA FL+++S+ KKR E      I + S  + + E+Y        SRQR+LRSY FS  K+K    +K KKWL  K     
Subjt:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTE------IPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTS

Query:  TTTSNHNNTTLSNHSCTS----IFNFIFCC
               N + S+ SC S    +F F+F C
Subjt:  TTTSNHNNTTLSNHSCTS----IFNFIFCC

A0A5B7C6D7 Uncharacterized protein (Fragment)4.2e-0439.82Show/hide
Query:  KWAEADATFLKRLSLNKKRTEIPSSSSSFFW---FETYRNNEIINY--SRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTTSNHNNTTLSNHSC
        +WAEAD  FL+ +S+NK+R +I SSS++        T  ++  I+Y  SRQRYLRSY FS   +K     ++KKWL  K          HNN+  S  SC
Subjt:  KWAEADATFLKRLSLNKKRTEIPSSSSSFFW---FETYRNNEIINY--SRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTTSNHNNTTLSNHSC

Query:  T---SIFNFIFCC
        +   ++F F+F C
Subjt:  T---SIFNFIFCC

A0A6J1KWW2 uncharacterized protein LOC1114994912.2e-2459.35Show/hide
Query:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT
        MD K V +AKL  + KWAEADATFL+RLSLNK  TEI SSS   SS   FET RNNEI  YSRQR+LRSY FSVE++K KRF KA+KW N KSR  ST++
Subjt:  MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSS---SSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTT

Query:  SNHNNTTLSNHSCTSIFNFIFCC
        +N     +   S   I NF+ CC
Subjt:  SNHNNTTLSNHSCTSIFNFIFCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGAAAGCGGTAGAAAATGCGAAGCTTTCTAAAGAAAGGAAATGGGCAGAAGCCGATGCAACGTTTTTGAAAAGACTAAGCTTAAACAAGAAGAGAACAGAGAT
CCCATCTTCTTCTTCTTCTTTTTTTTGGTTTGAAACATATAGAAATAATGAGATTATTAACTATTCGAGGCAAAGGTATTTGAGAAGCTACAGGTTTAGTGTGGAGAAGC
AAAAACCAAAGCGATTTGATAAGGCAAAGAAGTGGTTGAACTCCAAATCAAGACTAACATCAACAACAACTTCTAATCATAATAATACTACTCTTTCGAACCATTCATGT
ACTTCCATTTTTAACTTCATCTTCTGCTGTAGATTTGATTATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGAAAGCGGTAGAAAATGCGAAGCTTTCTAAAGAAAGGAAATGGGCAGAAGCCGATGCAACGTTTTTGAAAAGACTAAGCTTAAACAAGAAGAGAACAGAGAT
CCCATCTTCTTCTTCTTCTTTTTTTTGGTTTGAAACATATAGAAATAATGAGATTATTAACTATTCGAGGCAAAGGTATTTGAGAAGCTACAGGTTTAGTGTGGAGAAGC
AAAAACCAAAGCGATTTGATAAGGCAAAGAAGTGGTTGAACTCCAAATCAAGACTAACATCAACAACAACTTCTAATCATAATAATACTACTCTTTCGAACCATTCATGT
ACTTCCATTTTTAACTTCATCTTCTGCTGTAGATTTGATTATTCATAA
Protein sequenceShow/hide protein sequence
MDSKAVENAKLSKERKWAEADATFLKRLSLNKKRTEIPSSSSSFFWFETYRNNEIINYSRQRYLRSYRFSVEKQKPKRFDKAKKWLNSKSRLTSTTTSNHNNTTLSNHSC
TSIFNFIFCCRFDYS