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Tan0012323 (gene) of Snake gourd v1 genome

Gene IDTan0012323
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationLG01:91607548..91607898
RNA-Seq ExpressionTan0012323
SyntenyTan0012323
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.0e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEK +TELSKYA+ ++ +E +RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         P VS +GSFK    G
Subjt:  TPGVSGKGSFKPHRDG
KAA0042193.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.2e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEKN+TELSKYA+ ++ +E  RCKRF++GLR EIRT V AS+ W +F KL E  LRVE S+  +R  +        T+S  + R+R  +G +  F
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS KG+FK    G
Subjt:  TPGVSGKGSFKPHRDG
KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]1.8e-1947.41Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MT+ EYEK +TELS YA+ ++ +E++RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS +G+FK   +G
Subjt:  TPGVSGKGSFKPHRDG
TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]9.0e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEK +TELSKYA+ ++ +E +RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         P VS +GSFK    G
Subjt:  TPGVSGKGSFKPHRDG
TYK26763.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.2e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEKN+TELSKYA+ ++ +E  RCKRF++GLR EIRT V AS+ W +F KL E  LRVE S+  +R  +        T+S  + R+R  +G +  F
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS KG+FK    G
Subjt:  TPGVSGKGSFKPHRDG
TrEMBL top hitse value%identityAlignment
A0A5A7T1M0 Reverse transcriptase4.3e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEK +TELSKYA+ ++ +E +RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         P VS +GSFK    G
Subjt:  TPGVSGKGSFKPHRDG
A0A5A7TG44 DNA/RNA polymerases superfamily protein2.5e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEKN+TELSKYA+ ++ +E  RCKRF++GLR EIRT V AS+ W +F KL E  LRVE S+  +R  +        T+S  + R+R  +G +  F
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS KG+FK    G
Subjt:  TPGVSGKGSFKPHRDG
A0A5A7UZM6 Gag protease polyprotein-like protein8.7e-2047.41Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MT+ EYEK +TELS YA+ ++ +E++RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS +G+FK   +G
Subjt:  TPGVSGKGSFKPHRDG
A0A5D3BB91 Reverse transcriptase4.3e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEK +TELSKYA+ ++ +E +RCKRFE+GLR EIRT VTA ++W +FSKL E  LRVE S+  +R  +        T+S  + R+R  +  + RF
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         P VS +GSFK    G
Subjt:  TPGVSGKGSFKPHRDG
A0A5D3DT34 DNA/RNA polymerases superfamily protein2.5e-1949.14Show/hide
Query:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF
        MTV EYEKN+TELSKYA+ ++ +E  RCKRF++GLR EIRT V AS+ W +F KL E  LRVE S+  +R  +        T+S  + R+R  +G +  F
Subjt:  MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRF

Query:  TPGVSGKGSFKPHRDG
         PGVS KG+FK    G
Subjt:  TPGVSGKGSFKPHRDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTAACAGAATATGAGAAGAATTTCACAGAATTATCAAAGTATGCTAGCATTATTGTTGCAAACGAGATAGATCGATGCAAGAGGTTCGAGGATGGTCTACGAAC
AGAGATCCGAACGACTGTGACAGCAAGTTCGGAGTGGGCTGAGTTCTCCAAGCTTGCGGAGACGACATTACGGGTAGAGGGAAGCATAGTAGGTGACAGAACGGGAAAAG
GAGCTGTAGGTGGTGGTCATACAACTTATTCTGTTGGTTTATCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTGTTTCTGGAAAAGGGAGCTTT
AAACCCCATCGTGATGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAGTAACAGAATATGAGAAGAATTTCACAGAATTATCAAAGTATGCTAGCATTATTGTTGCAAACGAGATAGATCGATGCAAGAGGTTCGAGGATGGTCTACGAAC
AGAGATCCGAACGACTGTGACAGCAAGTTCGGAGTGGGCTGAGTTCTCCAAGCTTGCGGAGACGACATTACGGGTAGAGGGAAGCATAGTAGGTGACAGAACGGGAAAAG
GAGCTGTAGGTGGTGGTCATACAACTTATTCTGTTGGTTTATCACGAGACCGATTCCAACGAGGAGATAATAGGAGATTCACTCCAGGTGTTTCTGGAAAAGGGAGCTTT
AAACCCCATCGTGATGGGTAG
Protein sequenceShow/hide protein sequence
MTVTEYEKNFTELSKYASIIVANEIDRCKRFEDGLRTEIRTTVTASSEWAEFSKLAETTLRVEGSIVGDRTGKGAVGGGHTTYSVGLSRDRFQRGDNRRFTPGVSGKGSF
KPHRDG