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Tan0012325 (gene) of Snake gourd v1 genome

Gene IDTan0012325
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG09:27664433..27664846
RNA-Seq ExpressionTan0012325
SyntenyTan0012325
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]2.8e-3553.28Show/hide
Query:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF
        M SS  L  S+ L+L   L+   E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTT FYC F WV+G  H   IYDF
Subjt:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN
         RD   CT+CRW +Y  GPCL H + + T   CF WN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]4.0e-3453.44Show/hide
Query:  LALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR
        L  S+ L+L   L+   E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTT FYC F WV+G  H   IYDF RD   
Subjt:  LALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN
        CT+CRW +Y  GPCL H + + T   CF WN
Subjt:  CTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN

EEF44294.1 conserved hypothetical protein [Ricinus communis]2.7e-2243.64Show/hide
Query:  LQETTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDT
        L+  T+   N L   + LSVHC+SK++DLGVH+L P  +Y F F+PN WG T+F+C F W + G H   IY  +RD  +C+ C+W + + GPC+   K T
Subjt:  LQETTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDT

Query:  RTYNVCFTWN
          Y +C+ WN
Subjt:  RTYNVCFTWN

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]2.0e-3353.54Show/hide
Query:  VLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDC
        + L+L   L+   E ISLL ETT+  +N++  P+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTT FYC F WV+G  H   IYDF RD   CT+C
Subjt:  VLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTRTYNVCFTWN
        RW IY  GPCL H K + T   CF WN
Subjt:  RWEIYRDGPCLLHPKDTRTYNVCFTWN

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]2.0e-3354.55Show/hide
Query:  TGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYR
        T  +G  E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTT FYC F WV+G  H   IYDF RD   CT+CRW +Y 
Subjt:  TGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTRTYNVCFTWN
         GPCL H + + T   CF WN
Subjt:  DGPCLLHPKDTRTYNVCFTWN

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog9.6e-3454.55Show/hide
Query:  TGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYR
        T  +G  E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPN+WGTT FYC F WV+G  H   IYDF RD   CT+CRW +Y 
Subjt:  TGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYR

Query:  DGPCLLHPKDTRTYNVCFTWN
         GPCL H + + T   CF WN
Subjt:  DGPCLLHPKDTRTYNVCFTWN

A0A5A7TXE8 S-protein homolog9.6e-3453.54Show/hide
Query:  VLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDC
        + L+L   L+   E ISLL ETT+  +N++  P+L +HCRSK +DLGV+V+ P+ SYSF F PN+WGTT FYC F WV+G  H   IYDF RD   CT+C
Subjt:  VLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDC

Query:  RWEIYRDGPCLLHPKDTRTYNVCFTWN
        RW IY  GPCL H K + T   CF WN
Subjt:  RWEIYRDGPCLLHPKDTRTYNVCFTWN

B0F817 S-protein homolog1.3e-3553.28Show/hide
Query:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF
        M SS  L  S+ L+L   L+   E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTT FYC F WV+G  H   IYDF
Subjt:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN
         RD   CT+CRW +Y  GPCL H + + T   CF WN
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN

B0F818 S-protein homolog1.9e-3453.44Show/hide
Query:  LALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR
        L  S+ L+L   L+   E ISLL ETT+T +N++  P+L +HCRSK +DLGV+V+  + SYSF FRPNVWGTT FYC F WV+G  H   IYDF RD   
Subjt:  LALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR

Query:  CTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN
        CT+CRW +Y  GPCL H + + T   CF WN
Subjt:  CTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN

B9RWP2 S-protein homolog1.3e-2243.64Show/hide
Query:  LQETTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDT
        L+  T+   N L   + LSVHC+SK++DLGVH+L P  +Y F F+PN WG T+F+C F W + G H   IY  +RD  +C+ C+W + + GPC+   K T
Subjt:  LQETTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDCRWEIYRDGPCLLHPKDT

Query:  RTYNVCFTWN
          Y +C+ WN
Subjt:  RTYNVCFTWN

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.9e-1640.82Show/hide
Query:  LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTRTYNVCFTWN
        L  HC+SKD+DLG   L P  S+SF+F    +G T ++CSF W    +H+  IY  HRD+   N+C    C W+I R+GPC  +  +T+ +++C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTRTYNVCFTWN

F4JZG1 S-protein homolog 42.3e-1640.71Show/hide
Query:  ETTMTTINKLAD-PVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ +T  N+L D   L +HC+S D+DLG+ +L P  S+SF FRP+ V G T F+C F W  G +    IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTMTTINKLAD-PVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTRTYNVCFTWN
         D   +N+C+ WN
Subjt:  KDTRTYNVCFTWN

O23020 S-protein homolog 56.9e-2137.5Show/hide
Query:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF
        M+  S +     L+  +G  G        + T +T  N +  P L++HC+SK +DLG+HV+  +  Y F F+PN+W +T F+CSF W +    +  IYD 
Subjt:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTW
         RD   C DC+WEI  DGPC L  K       CF W
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTW

P0DN93 S-protein homolog 291.7e-1128.57Show/hide
Query:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF
        M +SS + + + ++LF  ++         +     T N      L++ CRSKD+DLG H+L    ++ + FRP+ + TT F C F+W     +N+  +D 
Subjt:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF

Query:  H---RDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN
        +   RD   C  C W I  D  C +     + ++ C+ WN
Subjt:  H---RDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTWN

Q9FMQ4 S-protein homolog 33.8e-1942.86Show/hide
Query:  NKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTRTYNV
        N+L D + L++HC+S D+DLG+ +L P  S+SF FR ++ GTT FYC F W  G +    IYD  RD  R    C +C W+I   GPC+    D   +N+
Subjt:  NKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTRTYNV

Query:  CFTWN
        C+ WN
Subjt:  CFTWN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.9e-2237.5Show/hide
Query:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF
        M+  S +     L+  +G  G        + T +T  N +  P L++HC+SK +DLG+HV+  +  Y F F+PN+W +T F+CSF W +    +  IYD 
Subjt:  MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDF

Query:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTW
         RD   C DC+WEI  DGPC L  K       CF W
Subjt:  HRDANRCTDCRWEIYRDGPCLLHPKDTRTYNVCFTW

AT3G16970.1 Plant self-incompatibility protein S1 family1.1e-1638.74Show/hide
Query:  TTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDAN----RCTDCRWEIYRDGPCLLHPKD
        TT+   N L   + L  HC+SK++DLG   +    ++SF FRP+V+G T F+C F+W +   H   IY   RD       C  C W+I +DGPC L+ K+
Subjt:  TTMTTINKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDAN----RCTDCRWEIYRDGPCLLHPKD

Query:  TRTYNVCFTWN
        +  ++VC  WN
Subjt:  TRTYNVCFTWN

AT4G16195.1 Plant self-incompatibility protein S1 family2.8e-1740.82Show/hide
Query:  LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTRTYNVCFTWN
        L  HC+SKD+DLG   L P  S+SF+F    +G T ++CSF W    +H+  IY  HRD+   N+C    C W+I R+GPC  +  +T+ +++C+ WN
Subjt:  LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDA---NRCTD--CRWEIYRDGPCLLHPKDTRTYNVCFTWN

AT5G12060.1 Plant self-incompatibility protein S1 family2.7e-2042.86Show/hide
Query:  NKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTRTYNV
        N+L D + L++HC+S D+DLG+ +L P  S+SF FR ++ GTT FYC F W  G +    IYD  RD  R    C +C W+I   GPC+    D   +N+
Subjt:  NKLADPV-LSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHPKDTRTYNV

Query:  CFTWN
        C+ WN
Subjt:  CFTWN

AT5G12070.1 Plant self-incompatibility protein S1 family1.6e-1740.71Show/hide
Query:  ETTMTTINKLAD-PVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHP
        ++ +T  N+L D   L +HC+S D+DLG+ +L P  S+SF FRP+ V G T F+C F W  G +    IYD  RD  R    C  C W+I + GPC    
Subjt:  ETTMTTINKLAD-PVLSVHCRSKDNDLGVHVLDPETSYSFTFRPN-VWGTTRFYCSFVWVEGGAHNIAIYDFHRDANR----CTDCRWEIYRDGPCLLHP

Query:  KDTRTYNVCFTWN
         D   +N+C+ WN
Subjt:  KDTRTYNVCFTWN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATCGTCAACATTAGCACTTTCTGTCTTGCTAATGTTATTTACAGGTCTAAATGGTTTTCAAGAATCAATCTCACTTCTGCAAGAAACTACAATGACAACGAT
TAATAAACTGGCCGACCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACACGGTTTTATTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACATCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTAGAACTTATAATGTTTGCTTTACTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATCGTCAACATTAGCACTTTCTGTCTTGCTAATGTTATTTACAGGTCTAAATGGTTTTCAAGAATCAATCTCACTTCTGCAAGAAACTACAATGACAACGAT
TAATAAACTGGCCGACCCAGTGTTGAGCGTTCACTGTAGATCAAAGGATAATGACTTGGGAGTCCATGTTTTAGATCCAGAAACAAGCTACTCCTTTACCTTTAGACCCA
ATGTTTGGGGGACAACACGGTTTTATTGTAGCTTTGTATGGGTGGAAGGTGGGGCCCACAACATCGCTATCTATGACTTTCACAGAGATGCAAATCGTTGCACTGATTGC
AGATGGGAAATTTATCGAGATGGCCCTTGTTTGTTGCACCCGAAAGACACTAGAACTTATAATGTTTGCTTTACTTGGAACTAG
Protein sequenceShow/hide protein sequence
MDSSSTLALSVLLMLFTGLNGFQESISLLQETTMTTINKLADPVLSVHCRSKDNDLGVHVLDPETSYSFTFRPNVWGTTRFYCSFVWVEGGAHNIAIYDFHRDANRCTDC
RWEIYRDGPCLLHPKDTRTYNVCFTWN