; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012366 (gene) of Snake gourd v1 genome

Gene IDTan0012366
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L24
Genome locationLG01:16536679..16540501
RNA-Seq ExpressionTan0012366
SyntenyTan0012366
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149305.1 50S ribosomal protein L24, chloroplastic [Cucumis sativus]1.2e-8991.1Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPPTIY AP+TSKEKPCLIVM+LKRWERKECKPNSLPV+HKMHVK+GDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        +V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE+GKRVRYLIKTGEIIDS +NWKKLKE  SK EVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

XP_008452322.1 PREDICTED: 50S ribosomal protein L24, chloroplastic [Cucumis melo]5.0e-9193.19Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPP IY AP+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        +V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIIDS +NWKKLKE KSKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

XP_022142723.1 50S ribosomal protein L24, chloroplastic [Momordica charantia]1.0e-9194.76Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMT+LSLSSNSFLGQRLP PTIY APVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        IVKEINLKTKHVKSREEEE+GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLE+G+RVRYLIKTGEIIDS +NWKKLKEEKSKTEVA TA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

XP_022929523.1 50S ribosomal protein L24, chloroplastic [Cucurbita moschata]5.5e-9092.67Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAM +LQSSMTALSLSS+SFLGQRL P TI+ APVTSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
         VKEINLKTKHVKSREEEEQGQIIK+EAPIHSSNVMLYSKE++VASRVGHKTLENGKRVRYLIKTGEIIDS DNWKKLKEEKSKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

XP_038903308.1 50S ribosomal protein L24, chloroplastic [Benincasa hispida]1.3e-9497.38Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPPTIY APVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        IV EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSV+NWKKLKEE SKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

TrEMBL top hitse value%identityAlignment
A0A0A0L6H1 KOW domain-containing protein5.9e-9091.1Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPPTIY AP+TSKEKPCLIVM+LKRWERKECKPNSLPV+HKMHVK+GDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        +V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQ+V SRVGHK LE+GKRVRYLIKTGEIIDS +NWKKLKE  SK EVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

A0A1S3BTL8 50S ribosomal protein L24, chloroplastic2.4e-9193.19Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPP IY AP+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        +V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIIDS +NWKKLKE KSKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

A0A5D3BUT2 50S ribosomal protein L242.4e-9193.19Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMTALSLSSNSFLGQRLPPP IY AP+TSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        +V EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNV SRVGHK LE+GKRVRYLIKTGEIIDS +NWKKLKE KSKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

A0A6J1CNZ8 50S ribosomal protein L24, chloroplastic4.8e-9294.76Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSSMT+LSLSSNSFLGQRLP PTIY APVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        IVKEINLKTKHVKSREEEE+GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLE+G+RVRYLIKTGEIIDS +NWKKLKEEKSKTEVA TA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

A0A6J1ESD2 50S ribosomal protein L24, chloroplastic2.7e-9092.67Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAM +LQSSMTALSLSS+SFLGQRL P TI+ APVTSKEKPCLIVM+LKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEIT IFKHNSKV
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
         VKEINLKTKHVKSREEEEQGQIIK+EAPIHSSNVMLYSKE++VASRVGHKTLENGKRVRYLIKTGEIIDS DNWKKLKEEKSKTEVATTA
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

SwissProt top hitse value%identityAlignment
B1XJS8 50S ribosomal protein L242.4e-3258.41Show/hide
Query:  KPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGK
        + +S P  HKMHVK GDTV+VI+GRDKGK+GE+      +SKV+VK++N++TKHVK ++E E GQI   EAPIHSSNVM YS+++ VASR+G++  E+G+
Subjt:  KPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGK

Query:  RVRYLIKTGEIID
        +VR L KTGE+ID
Subjt:  RVRYLIKTGEIID

P11893 50S ribosomal protein L24, chloroplastic3.1e-7277.37Show/hide
Query:  AMAALQSSMTALSLSSNSFLGQRLPPPTIY-MAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVI
        AMA+LQSSM++LSLSSNSFLGQ L P T+         EK CLIVM+LKRWERKECKPNSLPVLHK+HVKVGDTVKVI+G +KG+IGEIT IFKHNS VI
Subjt:  AMAALQSSMTALSLSSNSFLGQRLPPPTIY-MAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVI

Query:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKT-EVATT
        VK+INLKTKHVKS +E E GQI K+EAPIHSSNVMLYSKE++V SRVGHK LENGKRVRYLIKTGEIIDS +NWKKLKE   KT EVA T
Subjt:  VKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKT-EVATT

P27683 50S ribosomal protein L24, chloroplastic3.5e-7173.96Show/hide
Query:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV
        MAAMAALQSS T+LSLSSNSFLGQRL P    +   T    PCLIVMR+KRWERK+CKPNSLP LHKMHVKVGDTVKVI+G +KGKIGEI+ I KHNS V
Subjt:  MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKV

Query:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEK-SKTEVATTA
        I+K++NLKTKHVKS+EE EQGQIIKIEA IHSSNVMLYSKEQ VASRVGHK LE+G++VRYLIKTGEI+D+ D WK+++ +K S+T VA  A
Subjt:  IVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEK-SKTEVATTA

P92959 50S ribosomal protein L24, chloroplastic1.1e-6969.9Show/hide
Query:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN
        MA M+ALQSS T+LSLS S+SFLGQRL  P      +PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T IF HN
Subjt:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN

Query:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA
        S +++K++NLKTKH+KSREE E GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID+++ WK LKE K K  T+VA T+
Subjt:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA

Q02764 50S ribosomal protein L24, chloroplastic2.0e-7174.47Show/hide
Query:  MAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVIVK
        MAALQSS   L   S SF GQR  PP      V S E PCLI  +LKRWERKECKPNSLPVLHKMHVK+GDTVK+I+G DKGK+GEIT I KHNSKV+VK
Subjt:  MAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVIVK

Query:  EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA
        ++NLKTKHVKSR E+E GQI+KIEAPIHSSNVMLYSKEQ VASRVGHKTL+NGKRVRYLIKTGEIIDS +NWKK  +EK KT  A  A
Subjt:  EINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein1.1e-1140.43Show/hide
Query:  GDTVKVIAGRDKGKIGEITTIFKHNSKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTG
        GD V +I G+DKG+ G I  + +  ++VIV+  NL  KH+K   + E G I  +EAP+H+SNV +         +VG K LE+G +VR    TG
Subjt:  GDTVKVIAGRDKGKIGEITTIFKHNSKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTG

AT5G54600.1 Translation protein SH3-like family protein7.9e-7169.9Show/hide
Query:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN
        MA M+ALQSS T+LSLS S+SFLGQRL  P      +PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T IF HN
Subjt:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN

Query:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA
        S +++K++NLKTKH+KSREE E GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID+++ WK LKE K K  T+VA T+
Subjt:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA

AT5G54600.2 Translation protein SH3-like family protein4.1e-5963.27Show/hide
Query:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN
        MA M+ALQSS T+LSLS S+SFLGQRL  P      +PV   E PCL++ +LKRWERKECKPNSLP+LHKMHVK GDTVKVI+GRDKGKIGE+T IF HN
Subjt:  MAAMAALQSSMTALSLS-SNSFLGQRL--PPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHN

Query:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA
        S +                    GQI+KIEAPIHSSNVMLYSKE++V SRVGHK LE+G++VRYLIKTGE+ID+++ WK LKE K K  T+VA T+
Subjt:  SKVIVKEINLKTKHVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSK--TEVATTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCATGGCTGCGCTTCAGAGCTCTATGACCGCTCTTTCGCTCTCTTCCAATTCCTTCCTTGGCCAGCGCCTTCCTCCACCCACAATTTACATGGCTCCGGTAAC
GTCAAAAGAGAAGCCATGCCTCATAGTAATGAGGCTTAAAAGATGGGAACGGAAGGAATGTAAGCCAAACAGCCTTCCAGTATTACACAAAATGCATGTCAAGGTCGGAG
ACACAGTTAAAGTTATAGCTGGCCGTGATAAGGGAAAAATTGGAGAAATCACAACAATTTTTAAACATAATAGCAAAGTGATAGTCAAAGAAATAAATTTGAAGACAAAG
CATGTAAAGAGCAGAGAAGAGGAGGAACAAGGACAGATTATTAAGATCGAAGCTCCCATCCACAGCTCCAATGTGATGCTTTACTCAAAAGAACAGAATGTAGCAAGCCG
AGTCGGTCACAAAACCCTTGAAAATGGAAAACGAGTACGTTACCTCATAAAAACTGGGGAAATCATTGACAGCGTTGATAATTGGAAGAAACTGAAAGAAGAGAAGAGCA
AAACTGAAGTGGCTACAACTGCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAGATTGCCAAATACGTCGCCGTTTAAGACCAGCACCTCCTTCTATCGGTTCGCTATTTTGCAGTCTGCAATTGCATTATCCATTTGTAAAGCTCTCCAATACTACT
CTCAGAGACAAGCCACCACCAACAGCAACAGCAGCAGCAAAAATGGCAGCCATGGCTGCGCTTCAGAGCTCTATGACCGCTCTTTCGCTCTCTTCCAATTCCTTCCTTGG
CCAGCGCCTTCCTCCACCCACAATTTACATGGCTCCGGTAACGTCAAAAGAGAAGCCATGCCTCATAGTAATGAGGCTTAAAAGATGGGAACGGAAGGAATGTAAGCCAA
ACAGCCTTCCAGTATTACACAAAATGCATGTCAAGGTCGGAGACACAGTTAAAGTTATAGCTGGCCGTGATAAGGGAAAAATTGGAGAAATCACAACAATTTTTAAACAT
AATAGCAAAGTGATAGTCAAAGAAATAAATTTGAAGACAAAGCATGTAAAGAGCAGAGAAGAGGAGGAACAAGGACAGATTATTAAGATCGAAGCTCCCATCCACAGCTC
CAATGTGATGCTTTACTCAAAAGAACAGAATGTAGCAAGCCGAGTCGGTCACAAAACCCTTGAAAATGGAAAACGAGTACGTTACCTCATAAAAACTGGGGAAATCATTG
ACAGCGTTGATAATTGGAAGAAACTGAAAGAAGAGAAGAGCAAAACTGAAGTGGCTACAACTGCCTAAGAATCCTTTTTCCAACTGTACCTACCACTGCTGTAGTTATGA
ATCTCAAAGGGTATTTCAGTTGCCCATTTCTCTTTTCTTTAGCAAACATTTTTGTTGCGGTCTGTTCATTGATGCATGGTGAAGTGATATTGATTTGGTAGTTCATTGTT
TATTATATGAAAAGCTGGAAAAGGGTATCAGCTTGGAATTTCA
Protein sequenceShow/hide protein sequence
MAAMAALQSSMTALSLSSNSFLGQRLPPPTIYMAPVTSKEKPCLIVMRLKRWERKECKPNSLPVLHKMHVKVGDTVKVIAGRDKGKIGEITTIFKHNSKVIVKEINLKTK
HVKSREEEEQGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKTLENGKRVRYLIKTGEIIDSVDNWKKLKEEKSKTEVATTA