; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012369 (gene) of Snake gourd v1 genome

Gene IDTan0012369
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotransposon protein
Genome locationLG02:52225370..52226375
RNA-Seq ExpressionTan0012369
SyntenyTan0012369
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]6.7e-5742.24Show/hide
Query:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQ---------------------MMSPTCSGFWWNDERK
        M++T++K +KH WT++ DEVL          GGWRADNGTF+ GYLVQVQKL K K+  S+IQ                     MM P CSGF WN+ERK
Subjt:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQ---------------------MMSPTCSGFWWNDERK

Query:  CIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEA
        CIEAEK++F+DWVK                                          +A D+ +DD+++  +D  IP+P   +P S EDM +TP S   +A
Subjt:  CIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEA

Query:  GSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYPAEWKYKCCMLIL
        GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLY +LQ IPG+++DDCL +AE+LL D +  H+F+DYPAEWKY+ CM IL
Subjt:  GSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYPAEWKYKCCMLIL

Query:  GKE
        G++
Subjt:  GKE

KAA0067273.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-5451.71Show/hide
Query:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT
        MM P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P 
Subjt:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT

Query:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF
        S EDMS+TP S   + GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F
Subjt:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF

Query:  VDYPA
        +DYPA
Subjt:  VDYPA

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]4.5e-6949.44Show/hide
Query:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARG
        M++T++K +KH WT++EDEVL          GGWRADNGTF+ GYL Q   +          +MM P CSGF WN+ +KCIE EK +F+DWVK HP+A+G
Subjt:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARG

Query:  LRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFC
        L NKPFPYF +L ++FG+DRATG   +TP  M+S +A D  +DD+++  +D  IP+P   +P S EDM +TP S   +AGSS  SK+R+    D++D F 
Subjt:  LRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFC

Query:  TEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYP
          MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL +AE+LL D +  H+F+DYP
Subjt:  TEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYP

TYK10886.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-5451.22Show/hide
Query:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT
        MM P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P 
Subjt:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT

Query:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF
        S EDMS+TP S   + GSS  SK+R+    D++D FC  MR  S ++ +I  W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F
Subjt:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF

Query:  VDYPA
        ++YPA
Subjt:  VDYPA

XP_008460440.1 PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]2.6e-5351.47Show/hide
Query:  MSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTS
        M P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P S
Subjt:  MSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTS

Query:  DEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFV
         EDMS+TP S   + GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F+
Subjt:  DEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFV

Query:  DYPA
        DYPA
Subjt:  DYPA

TrEMBL top hitse value%identityAlignment
A0A1S3CC17 uncharacterized protein LOC1034992481.3e-5351.47Show/hide
Query:  MSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTS
        M P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P S
Subjt:  MSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTS

Query:  DEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFV
         EDMS+TP S   + GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F+
Subjt:  DEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFV

Query:  DYPA
        DYPA
Subjt:  DYPA

A0A5A7U7F7 Retrotransposon protein3.2e-5742.24Show/hide
Query:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQ---------------------MMSPTCSGFWWNDERK
        M++T++K +KH WT++ DEVL          GGWRADNGTF+ GYLVQVQKL K K+  S+IQ                     MM P CSGF WN+ERK
Subjt:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQ---------------------MMSPTCSGFWWNDERK

Query:  CIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEA
        CIEAEK++F+DWVK                                          +A D+ +DD+++  +D  IP+P   +P S EDM +TP S   +A
Subjt:  CIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEA

Query:  GSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYPAEWKYKCCMLIL
        GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLY +LQ IPG+++DDCL +AE+LL D +  H+F+DYPAEWKY+ CM IL
Subjt:  GSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYPAEWKYKCCMLIL

Query:  GKE
        G++
Subjt:  GKE

A0A5A7VGQ0 Retrotransposon protein3.3e-5451.71Show/hide
Query:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT
        MM P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P 
Subjt:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT

Query:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF
        S EDMS+TP S   + GSS  SK+R+    D++D F   MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F
Subjt:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF

Query:  VDYPA
        +DYPA
Subjt:  VDYPA

A0A5D3C7T4 Uncharacterized protein2.2e-6949.44Show/hide
Query:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARG
        M++T++K +KH WT++EDEVL          GGWRADNGTF+ GYL Q   +          +MM P CSGF WN+ +KCIE EK +F+DWVK HP+A+G
Subjt:  MSNTSTKNSKHMWTSVEDEVL----------GGWRADNGTFRPGYLVQVQKLFKHKLPESDIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARG

Query:  LRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFC
        L NKPFPYF +L ++FG+DRATG   +TP  M+S +A D  +DD+++  +D  IP+P   +P S EDM +TP S   +AGSS  SK+R+    D++D F 
Subjt:  LRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFC

Query:  TEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYP
          MR  S ++ +IA W +EK E+ES+  KRLYAELQ IPG+++DDCL +AE+LL D +  H+F+DYP
Subjt:  TEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYP

A0A5D3CKC1 Retrotransposon protein3.3e-5451.22Show/hide
Query:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT
        MM P CS F WN+E+KCIEA+K++F+DWVK HP+ARGL NK FPYF +L I+FG+DRATG   +TP  M    A D  +DD+++  +D  IP+P   +P 
Subjt:  MMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDV-DDDINMTFQDLPIPDPPSYDPT

Query:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF
        S EDMS+TP S   + GSS  SK+R+    D++D FC  MR  S ++ +I  W +EK E+ES+  KRLYAELQ IPG+++DDCL + E+LL D    H+F
Subjt:  SDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRLYAELQAIPGIEMDDCLQIAETLLADISKFHSF

Query:  VDYPA
        ++YPA
Subjt:  VDYPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein2.2e-0530.67Show/hide
Query:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDVDDDIN
        GF W++ R  I A+ A+++ ++K HP AR  R K  P +++L  IF      G       + A  S T    + N
Subjt:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHNMASASATDVDDDIN

AT2G24960.2 unknown protein2.0e-0638.89Show/hide
Query:  SGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATG
        +GF W+  R  + A+  I+N +++AHP AR  R K  P +  L  IFGK+ + G
Subjt:  SGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATG

AT4G02210.1 unknown protein2.6e-0636.17Show/hide
Query:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFG
        GF W++ER+ + A+  ++ D++KAH  AR    +P PY+ +L ++ G
Subjt:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFG

AT4G02210.2 unknown protein2.6e-0636.17Show/hide
Query:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFG
        GF W++ER+ + A+  ++ D++KAH  AR    +P PY+ +L ++ G
Subjt:  GFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFG

AT5G27260.1 unknown protein1.2e-0843.94Show/hide
Query:  DIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGA
        D+Q  S   SGF W+   K   A   +++D++KAHP+ + LR   F +FDEL IIFG+  ATG  A
Subjt:  DIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAATACAAGTACAAAGAATTCTAAACACATGTGGACTTCAGTGGAGGATGAGGTATTGGGGGGGTGGAGAGCTGATAATGGCACATTTCGACCTGGGTACTTAGT
ACAAGTACAAAAATTGTTCAAGCATAAACTCCCTGAAAGCGACATACAAATGATGAGCCCAACATGTAGTGGGTTTTGGTGGAATGACGAACGTAAGTGCATTGAGGCAG
AGAAAGCAATTTTCAATGACTGGGTTAAGGCACACCCTCATGCTCGAGGTCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGATAGG
GCAACTGGTGCCGGAGCAGAAACTCCCCATAACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACC
TTCATATGACCCAACATCTGACGAAGATATGTCTGCCACACCTATATCCAGGAACGATGAGGCAGGATCATCAAGTGGGTCGAAGAGACGCAAAGTGAAACAATGGGACA
TTATTGACATATTCTGTACAGAGATGCGTTGGGCGTCAACACAACTAGAGAGGATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTA
TATGCAGAACTTCAAGCTATCCCTGGTATAGAGATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCGTCGACTACCCGGC
TGAATGGAAATACAAATGTTGCATGCTTATCTTGGGAAAGGAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAATACAAGTACAAAGAATTCTAAACACATGTGGACTTCAGTGGAGGATGAGGTATTGGGGGGGTGGAGAGCTGATAATGGCACATTTCGACCTGGGTACTTAGT
ACAAGTACAAAAATTGTTCAAGCATAAACTCCCTGAAAGCGACATACAAATGATGAGCCCAACATGTAGTGGGTTTTGGTGGAATGACGAACGTAAGTGCATTGAGGCAG
AGAAAGCAATTTTCAATGACTGGGTTAAGGCACACCCTCATGCTCGAGGTCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGATAGG
GCAACTGGTGCCGGAGCAGAAACTCCCCATAACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACC
TTCATATGACCCAACATCTGACGAAGATATGTCTGCCACACCTATATCCAGGAACGATGAGGCAGGATCATCAAGTGGGTCGAAGAGACGCAAAGTGAAACAATGGGACA
TTATTGACATATTCTGTACAGAGATGCGTTGGGCGTCAACACAACTAGAGAGGATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTA
TATGCAGAACTTCAAGCTATCCCTGGTATAGAGATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCGTCGACTACCCGGC
TGAATGGAAATACAAATGTTGCATGCTTATCTTGGGAAAGGAGGCATGA
Protein sequenceShow/hide protein sequence
MSNTSTKNSKHMWTSVEDEVLGGWRADNGTFRPGYLVQVQKLFKHKLPESDIQMMSPTCSGFWWNDERKCIEAEKAIFNDWVKAHPHARGLRNKPFPYFDELSIIFGKDR
ATGAGAETPHNMASASATDVDDDINMTFQDLPIPDPPSYDPTSDEDMSATPISRNDEAGSSSGSKRRKVKQWDIIDIFCTEMRWASTQLERIALWPKEKDELESTRRKRL
YAELQAIPGIEMDDCLQIAETLLADISKFHSFVDYPAEWKYKCCMLILGKEA