; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012396 (gene) of Snake gourd v1 genome

Gene IDTan0012396
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal protein L11
Genome locationLG03:76345937..76347507
RNA-Seq ExpressionTan0012396
SyntenyTan0012396
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034038.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-6997.06Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTL++KH+Y+IAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

XP_004142176.1 54S ribosomal protein L19, mitochondrial [Cucumis sativus]1.3e-6997.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

XP_008449842.1 PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo]1.0e-6997.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

XP_022132985.1 54S ribosomal protein L19, mitochondrial [Momordica charantia]1.0e-6997.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLSLKH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

XP_038901904.1 54S ribosomal protein L19, mitochondrial [Benincasa hispida]4.6e-7098.53Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

TrEMBL top hitse value%identityAlignment
A0A0A0KWT6 Uncharacterized protein6.5e-7097.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

A0A1S3BMZ5 54S ribosomal protein L19, mitochondrial5.0e-7097.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

A0A5A7T9U7 54S ribosomal protein L195.0e-7097.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLS+KH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

A0A6J1BU21 54S ribosomal protein L19, mitochondrial5.0e-7097.79Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTLSLKH+YEIAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like1.5e-6997.06Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        PGHVVASTL+LKH+Y+IAKVKQSDPYCQYMPLESIC
Subjt:  PGHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

SwissProt top hitse value%identityAlignment
A7HWQ0 50S ribosomal protein L111.2e-2549.12Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQK +   P+ V ITAF D +F F +K+P  +++LKKAA + SGS  PG   A T++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSD
        +    EIA+ K +D
Subjt:  LKHVYEIAKVKQSD

Q07KJ7 50S ribosomal protein L115.6e-2649.57Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALGQ  LN+M FCK+FNA+TQK + +TP+ V IT + D +F F +K+P ++++LK+AA I+SGS  PG  VA  +S
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYC
           V EIA+ K  D  C
Subjt:  LKHVYEIAKVKQSDPYC

Q2RQU9 50S ribosomal protein L111.2e-2550Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQ  +P  P+ V ITA+ D TF +  K+P +T++LKKAAGI  GS+ PG   A T++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSD
        ++ V +IA+ K  D
Subjt:  LKHVYEIAKVKQSD

Q3SSY4 50S ribosomal protein L114.3e-2649.57Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALGQ  LN+M FCK FNA+TQK + +TP+ V IT + D +F F +K+P + ++LK+AA I+SGS  PG   A TL+
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYC
           V EIA+ K  D  C
Subjt:  LKHVYEIAKVKQSDPYC

Q9UTK2 54S ribosomal protein L19, mitochondrial1.0e-2749.17Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYE
        I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   +E GSS P H +   LSLKH+YE
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYE

Query:  IAKVKQSDPYCQYMPLESIC
        IAK+K +DP  Q + L S+C
Subjt:  IAKVKQSDPYCQYMPLESIC

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l115.2e-1943.59Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG+E GS  P       ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  LKHVYEIAKVKQSDPYC
        +  +  IA  K  D  C
Subjt:  LKHVYEIAKVKQSDPYC

AT4G35490.1 mitochondrial ribosomal protein L111.1e-6485.93Show/hide
Query:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP
        A  KEIL RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RP
Subjt:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP

Query:  GHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC
        GH+  +TLS++HVYEIAKVKQ+DP+CQYMPLESIC
Subjt:  GHVVASTLSLKHVYEIAKVKQSDPYCQYMPLESIC

AT5G51610.1 Ribosomal protein L11 family protein4.7e-0433.93Show/hide
Query:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYEIAKVKQSDPYC
        D +F F +K+P  ++ L KAAG++ GS  P  +    +++  V +IA+VK  +  C
Subjt:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSLKHVYEIAKVKQSDPYC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGAAAGAGATTCTAACGAGGCGACCTGTCGCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCAGCGCCACCGGTCGGTCCGGCGCTCGG
TCAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAGCCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CTTTCGAGTTCACCGTCAAGTCGCCATCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGAGTCCGGGAGCAGCCGCCCAGGCCACGTGGTCGCCTCCACGCTCTCC
CTCAAGCACGTTTACGAGATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTATATGCCACTAGAATCCATTTGTTCTCATGACATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGAAAGAGATTCTAACGAGGCGACCTGTCGCTGCCACCATCAGGCTCACCGTCCCTGCCGGTGGAGCTCGCCCAGCGCCACCGGTCGGTCCGGCGCTCGG
TCAGTACCGGCTGAATCTGATGGCCTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAGCCCGACACACCCATGGCCGTCACCATTACGGCTTTCAAGGACAACA
CTTTCGAGTTCACCGTCAAGTCGCCATCGGTCACTTGGTACCTGAAGAAAGCCGCCGGGATCGAGTCCGGGAGCAGCCGCCCAGGCCACGTGGTCGCCTCCACGCTCTCC
CTCAAGCACGTTTACGAGATCGCCAAAGTCAAGCAGTCCGATCCTTATTGCCAGTATATGCCACTAGAATCCATTTGTTCTCATGACATTTAATCGAAGTGGACTTGAAC
TTTTGCCATTTAAGACTGAAAATTTGAGGAACTATTGCTATGACAATCAGTTTGTTGTGCAAATTTGATATTGAGCTTGATGTCTACTGACTTGTGCTCTTATGTTCTTA
TGTGATAATATTAACTTAAGTTTTTATGTCTGGGGTAGTCTGCTTTTTGCCTATCCAACTTGTAAACTATTGGGTGTAGAGGTAAGCTACATATTTTTATCTAGT
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
LKHVYEIAKVKQSDPYCQYMPLESICSHDI