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Tan0012429 (gene) of Snake gourd v1 genome

Gene IDTan0012429
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich protein 5
Genome locationLG01:18916583..18917293
RNA-Seq ExpressionTan0012429
SyntenyTan0012429
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065824.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]4.0e-0565.16Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGG
        MA K++FL+ LGAF+ +T GARKL     +DEKF+H     GGGLGGGGGGGFGG      GGG GGG+G GSG+GGG GGG G G G G GGGGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGG

Query:  Y----GSGFGGGAGSGGGLGG--GGGGGYGGGGGGGLGG--GGGYGGGSGAGGGF
             G+GFGGG+G GGGLGG  GGGGG+GGGGGGGLGG  GGG+GGG+GAGGG+
Subjt:  Y----GSGFGGGAGSGGGLGG--GGGGGYGGGGGGGLGG--GGGYGGGSGAGGGF

XP_017979595.1 PREDICTED: glycine-rich protein 5 [Theobroma cacao]4.4e-0464.52Show/hide
Query:  KLLFLMLLGAFVCATGARKLVQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGL------GGGYGRGSGYGGGFGGGRGVGFGGGS--GGGGGFGGGYG
        KLL  + LGA VCAT   + +    +DEK F+H    GGGLGGGGGGG GGGGGL      GGG G G+G GGG GGG G GFGGG   GGGGGFGGG G
Subjt:  KLLFLMLLGAFVCATGARKLVQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGL------GGGYGRGSGYGGGFGGGRGVGFGGGS--GGGGGFGGGYG

Query:  SGFGGGAGSGGGLGG----GGGGGYGGGG--GGGLGGGGGYGGGSGAGGGFGGFP
         GFGGGAG+GGGLGG    GGGGG+GGGG  GGG G GGG+GGG+GAGGG GG P
Subjt:  SGFGGGAGSGGGLGG----GGGGGYGGGG--GGGLGGGGGYGGGSGAGGGFGGFP

XP_022151305.1 glycine-rich protein 5 [Momordica charantia]4.7e-0666.45Show/hide
Query:  MACKLLFLMLLGAFVCATG-ARKLVQDPLKDEKFYHGGGLGGGGGG---GFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGGFGGGY
        MA K+LFL+LL AF+C T  ARKL      D+KF+H  G GGGGGG   G GGGGGLGGG+G GSG+GGG GGG G G        GGG GGGGG GGG 
Subjt:  MACKLLFLMLLGAFVCATG-ARKLVQDPLKDEKFYHGGGLGGGGGG---GFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGGFGGGY

Query:  GSGFGGGAGSGGGLGG----GGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGG
        G GFGGGAG+GGGLGG    GGGGG+GGG GGGLGGG G+GGG+GAGGGFGG
Subjt:  GSGFGGGAGSGGGLGG----GGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGG

XP_024021679.1 glycine-rich protein 5-like [Morus notabilis]9.8e-0460.61Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEKFYH-------GGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGG
        M  ++L L+L+GAF+C + ARKL   +   +DEK ++       GGGLGGGGGGGFGGGGGLGGG G G+G GGGFGGG G G        GGG GGGGG
Subjt:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEKFYH-------GGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGG

Query:  FGGGYGSGFGGGA----------GSGGGLGGGGGGGYGGGGGGGLGG--GGGYGGGSGAGGGFGG
         GGG G GFGGGA          G GGG GGGGGGG+GGGGGGGLGG  GGG+GGG+GAGGG GG
Subjt:  FGGGYGSGFGGGA----------GSGGGLGGGGGGGYGGGGGGGLGG--GGGYGGGSGAGGGFGG

XP_031737995.1 glycine-rich protein 5 [Cucumis sativus]3.2e-1576.26Show/hide
Query:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGGYGSGFGGGAGSG
        MACKL FLMLLG F CATGARKL  DPLKDEKF+HGGGLGGGGGGG GGGGG GGG+G GSG+GGG G G G   GGG GGGGG GGG G GFG G G G
Subjt:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGGYGSGFGGGAGSG

Query:  GGLGGGGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGGFP
        GG G GGGGG+GGG GGG G GGGYGGG G+GGGFG FP
Subjt:  GGLGGGGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGGFP

TrEMBL top hitse value%identityAlignment
A0A0A0L2A7 Uncharacterized protein2.1e-0463.03Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGG--GSGGGGGFG
        MA K++FL+ LGAF+ +T GARKL     +DEKF+      GGGLGGGGGGGFGG      GGG GGG+G GSG+GGG GGG G G GG  G GGGGG G
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGG--GSGGGGGFG

Query:  GGYGSGFGGGAGS------------GGGLGGGGGGGYGGGGGGGLGG--GGGYGGGSGAGGGFGG
        GG G GFGGGAG+            GGGLGGGGGGG+GGGGGGGLGG  GGG+GGGSG GGG GG
Subjt:  GGYGSGFGGGAGS------------GGGLGGGGGGGYGGGGGGGLGG--GGGYGGGSGAGGGFGG

A0A0A0L4Y2 Uncharacterized protein1.6e-1576.26Show/hide
Query:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGGYGSGFGGGAGSG
        MACKL FLMLLG F CATGARKL  DPLKDEKF+HGGGLGGGGGGG GGGGG GGG+G GSG+GGG G G G   GGG GGGGG GGG G GFG G G G
Subjt:  MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGGYGSGFGGGAGSG

Query:  GGLGGGGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGGFP
        GG G GGGGG+GGG GGG G GGGYGGG G+GGGFG FP
Subjt:  GGLGGGGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGGFP

A0A2P5CNS2 Uncharacterized protein4.7e-0462.65Show/hide
Query:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGG----------GYGRGSGYGGGFGGGRGVGFGGGSGG--
        M C++L L+L+GAF+C++ ARKL   +    DEK F H    GGGLGGGGGGGFGGGGGLGG          G G G+G GGG GGG G GFGGG GG  
Subjt:  MACKLLFLMLLGAFVCATGARKL--VQDPLKDEK-FYH----GGGLGGGGGGGFGGGGGLGG----------GYGRGSGYGGGFGGGRGVGFGGGSGG--

Query:  GGGFGGGY--GSGFGGGAGSGGGL----GGGGGGGYGGGGGGGLGG----GGGYGGGSGAGGGFGG
        GGG GGG+  G+GFGGGAG+GGGL    GGGGGGG+GGGGGGGLGG    GGG+GGG+GAGGG GG
Subjt:  GGGFGGGY--GSGFGGGAGSGGGL----GGGGGGGYGGGGGGGLGG----GGGYGGGSGAGGGFGG

A0A5D3BB90 Glycine-rich cell wall structural protein-like1.9e-0565.16Show/hide
Query:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGG
        MA K++FL+ LGAF+ +T GARKL     +DEKF+H     GGGLGGGGGGGFGG      GGG GGG+G GSG+GGG GGG G G G G GGGGG GGG
Subjt:  MACKLLFLMLLGAFVCAT-GARKLVQDPLKDEKFYH-----GGGLGGGGGGGFGG------GGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGG

Query:  Y----GSGFGGGAGSGGGLGG--GGGGGYGGGGGGGLGG--GGGYGGGSGAGGGF
             G+GFGGG+G GGGLGG  GGGGG+GGGGGGGLGG  GGG+GGG+GAGGG+
Subjt:  Y----GSGFGGGAGSGGGLGG--GGGGGYGGGGGGGLGG--GGGYGGGSGAGGGF

A0A6J1DAT8 glycine-rich protein 52.3e-0666.45Show/hide
Query:  MACKLLFLMLLGAFVCATG-ARKLVQDPLKDEKFYHGGGLGGGGGG---GFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGGFGGGY
        MA K+LFL+LL AF+C T  ARKL      D+KF+H  G GGGGGG   G GGGGGLGGG+G GSG+GGG GGG G G        GGG GGGGG GGG 
Subjt:  MACKLLFLMLLGAFVCATG-ARKLVQDPLKDEKFYHGGGLGGGGGG---GFGGGGGLGGGYGRGSGYGGGFGGGRGVGF-------GGGSGGGGGFGGGY

Query:  GSGFGGGAGSGGGLGG----GGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGG
        G GFGGGAG+GGGLGG    GGGGG+GGG GGGLGGG G+GGG+GAGGGFGG
Subjt:  GSGFGGGAGSGGGLGG----GGGGGYGGGGGGGLGGGGGYGGGSGAGGGFGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTAAGCTTCTCTTTCTCATGCTCCTTGGTGCCTTTGTTTGCGCCACTGGAGCTCGAAAGCTCGTCCAAGATCCTTTAAAGGATGAGAAATTTTACCATGGTGG
TGGATTAGGTGGTGGAGGTGGTGGTGGATTCGGCGGAGGCGGAGGGCTTGGCGGTGGTTATGGTAGAGGATCTGGATATGGCGGTGGCTTCGGTGGCGGCCGAGGAGTAG
GTTTTGGAGGAGGATCCGGTGGTGGTGGAGGTTTTGGAGGTGGATATGGTTCAGGGTTCGGAGGTGGTGCCGGTTCAGGTGGTGGACTTGGAGGTGGTGGTGGTGGAGGG
TATGGTGGCGGCGGCGGAGGTGGACTTGGTGGGGGCGGAGGATACGGTGGAGGCTCTGGGGCCGGTGGCGGGTTTGGAGGATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTAAGCTTCTCTTTCTCATGCTCCTTGGTGCCTTTGTTTGCGCCACTGGAGCTCGAAAGCTCGTCCAAGATCCTTTAAAGGATGAGAAATTTTACCATGGTGG
TGGATTAGGTGGTGGAGGTGGTGGTGGATTCGGCGGAGGCGGAGGGCTTGGCGGTGGTTATGGTAGAGGATCTGGATATGGCGGTGGCTTCGGTGGCGGCCGAGGAGTAG
GTTTTGGAGGAGGATCCGGTGGTGGTGGAGGTTTTGGAGGTGGATATGGTTCAGGGTTCGGAGGTGGTGCCGGTTCAGGTGGTGGACTTGGAGGTGGTGGTGGTGGAGGG
TATGGTGGCGGCGGCGGAGGTGGACTTGGTGGGGGCGGAGGATACGGTGGAGGCTCTGGGGCCGGTGGCGGGTTTGGAGGATTTCCTTGAACTAATTAATAGTACCGTTT
TCCATACTAAGAACAAGTCACTTGCTAGTTTACTACTTGTGCAATGTGTGTGTTTAATTTGTATGATGATGAGAGTTCAATGAGGACTATCTCAACTCTCACCCTATAAG
TTATAGTTTATTTCCTACTACCAACATCAAAGTATTATTAAACGCAGCAAAACTACATAATATTTCCAATATTTCTGGTTGTATTTTCGACCCAAGAGAAGCTTTTCACT
GTAATATTCTCCATTACCATAAATTGAATATCTTACTTTTTGTTTACAAAA
Protein sequenceShow/hide protein sequence
MACKLLFLMLLGAFVCATGARKLVQDPLKDEKFYHGGGLGGGGGGGFGGGGGLGGGYGRGSGYGGGFGGGRGVGFGGGSGGGGGFGGGYGSGFGGGAGSGGGLGGGGGGG
YGGGGGGGLGGGGGYGGGSGAGGGFGGFP