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Tan0012518 (gene) of Snake gourd v1 genome

Gene IDTan0012518
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionextensin-like isoform X2
Genome locationLG08:74901597..74901955
RNA-Seq ExpressionTan0012518
SyntenyTan0012518
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031836.1 Protein PSY3 [Cucumis melo var. makuwa]2.2e-1064.18Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTV
        MD+ KAR   FLLLS  LV+SARI PHSE Q    +INDY DPGANPRHDP    PPP  QFEV  V
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTV
KAA0031837.1 hypothetical protein E6C27_scaffold848G00870 [Cucumis melo var. makuwa]1.3e-1055.26Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        MD+ K R    LLLS ++V+ ARI PHSE Q     INDY DPGANPRHDP    PPPP QFEV  V   H+   P
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
KAA0031838.1 hypothetical protein E6C27_scaffold848G00880 [Cucumis melo var. makuwa]1.2e-1159.46Show/hide
Query:  FKAR-FCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        FKAR    FLLLS +LV+SARI PHSE Q    +INDY DPGANPRHDP    PPPP QFE+  V D  +   P
Subjt:  FKAR-FCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
KGN65816.1 hypothetical protein Csa_023196 [Cucumis sativus]1.3e-1055.26Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        MD+ KAR   FLLLS +L +SARI PHSE Q    ++NDY+DPGANPRHDP   PPP    FEV  V   H++  P
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
XP_038895781.1 circumsporozoite protein-like [Benincasa hispida]4.7e-1376.92Show/hide
Query:  FKARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPP
        FKAR  FFLLLS +L++ ARITPHSE Q   I INDYADPGANPRHDPNQPP
Subjt:  FKARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPP
TrEMBL top hitse value%identityAlignment
A0A0A0LV67 Uncharacterized protein3.1e-1055.26Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        MD+ KAR    LLLS  LV+SARI PHSE Q    +INDY DPGANPRH+P   PPPP   FE+  V D  ++  P
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
A0A0A0M0T8 Uncharacterized protein6.3e-1155.26Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        MD+ KAR   FLLLS +L +SARI PHSE Q    ++NDY+DPGANPRHDP   PPP    FEV  V   H++  P
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
A0A5A7SMH7 Uncharacterized protein5.7e-1259.46Show/hide
Query:  FKAR-FCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        FKAR    FLLLS +LV+SARI PHSE Q    +INDY DPGANPRHDP    PPPP QFE+  V D  +   P
Subjt:  FKAR-FCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
A0A5A7SPC6 Protein PSY31.1e-1064.18Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTV
        MD+ KAR   FLLLS  LV+SARI PHSE Q    +INDY DPGANPRHDP    PPP  QFEV  V
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTV
A0A5D3BBU7 Uncharacterized protein6.3e-1155.26Show/hide
Query:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
        MD+ K R    LLLS ++V+ ARI PHSE Q     INDY DPGANPRHDP    PPPP QFEV  V   H+   P
Subjt:  MDF-KARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29995.1 unknown protein3.3e-0447.06Show/hide
Query:  CFFLLLSLSLVSSARIT-PHSEKQAT-------MIVINDYADPGANPRHDP
        C FL  + +L+SSARI+   SE + T       M+  NDY+DP AN RHDP
Subjt:  CFFLLLSLSLVSSARIT-PHSEKQAT-------MIVINDYADPGANPRHDP
AT3G47295.1 unknown protein9.6e-0437.1Show/hide
Query:  MDFKARFCFFLLLSLSLVSSAR---------ITPHSEKQATMIVINDYADPGANPRHDPNQP
        M F  R   FL+L+L LV+S+          +   +  +  M+ I DY DP AN RHDP+ P
Subjt:  MDFKARFCFFLLLSLSLVSSAR---------ITPHSEKQATMIVINDYADPGANPRHDPNQP
AT5G58650.1 plant peptide containing sulfated tyrosine 11.5e-0437.5Show/hide
Query:  MDFKARFCFFLLLSLSLVSSARITPHS----------EKQATMIVINDYADPGANPRHDPNQPP
        M F  R    LLL+L++ SS    P S          ++   M+ + DY DP ANP+HDP  PP
Subjt:  MDFKARFCFFLLLSLSLVSSARITPHS----------EKQATMIVINDYADPGANPRHDPNQPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTAAAGCTCGTTTTTGCTTCTTTCTCTTGCTCTCGCTCTCTCTCGTCAGCTCGGCTCGGATCACACCCCATTCAGAAAAGCAAGCGACGATGATTGTGATAAA
CGACTATGCAGATCCCGGGGCTAATCCAAGACACGATCCAAATCAACCGCCACCGCCACCACCACCACAATTCGAAGTTTTAACAGTTGCAGATAGCCACATGAGTACGG
AGCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTAAAGCTCGTTTTTGCTTCTTTCTCTTGCTCTCGCTCTCTCTCGTCAGCTCGGCTCGGATCACACCCCATTCAGAAAAGCAAGCGACGATGATTGTGATAAA
CGACTATGCAGATCCCGGGGCTAATCCAAGACACGATCCAAATCAACCGCCACCGCCACCACCACCACAATTCGAAGTTTTAACAGTTGCAGATAGCCACATGAGTACGG
AGCCCTAA
Protein sequenceShow/hide protein sequence
MDFKARFCFFLLLSLSLVSSARITPHSEKQATMIVINDYADPGANPRHDPNQPPPPPPPQFEVLTVADSHMSTEP