CuGenDBv2

Gene ID	Tan0012577
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome location	LG06:44538941..44542553
RNA-Seq Expression	Tan0012577
Synteny	Tan0012577
Gene Ontology terms	GO:0005488 - binding (molecular function) GO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
InterPro domains	IPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6602457.1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.8e-29

59.66

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

XP_022134322.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Momordica charantia]

1.2e-27

57.98

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIA+PLS  S RRS   HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

XP_022923802.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]

3.8e-29

59.66

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]

3.8e-29

59.66

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

XP_023511536.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.9e-28

58.82

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NI VPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

3.0e-27

57.98

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S   S H HV RAQ EPSEKS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+K  EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

3.0e-27

57.98

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S   S H HV RAQ EPSEKS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+K  EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

A0A6J1BYG9 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

5.9e-28

57.98

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIA+PLS  S RRS   HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

A0A6J1E756 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

1.8e-29

59.66

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

A0A6J1JLC1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

1.8e-29

59.66

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Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCV

Query:  PMRESLPHCHIFTFSLRED
        PMRE    CH   F   E+
Subjt:  PMRESLPHCHIFTFSLRED

SwissProt top hits

e value

%identity

Alignment

O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

1.2e-25

53.85

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Query:  STFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWN
        +T  ST  +AVP      RR  +  V RAQ EPS+KS+EIMRK SE                     +GL+DHKDTLG PLCPCRHYD+KA EVAQGFWN
Subjt:  STFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWN

Query:  CPCVPMRESLP-HCHIF
        CPCVPMRE    HC +F
Subjt:  CPCVPMRESLP-HCHIF

P41347 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

9.8e-20

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Query:  PRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRESLP-HCHIF
        PRR             ++KS+E+MRK SE                     +GL+DH+DTLG PLCPCRHYD+KA EVAQGFWNCPCVPMRE    HC +F
Subjt:  PRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRESLP-HCHIF

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

5.5e-23

51.85

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Query:  PLSGP--SPRRSCHNHVFRAQGEPSEKSLEIMRKISES-------------------KQGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRES
        P+S P  SPRR   + V RAQ +PS+KS+E+MRK SE                     +GL+DH+DTLG PLCPCRHYD+K  E  QGFWNCPCVPMRE 
Subjt:  PLSGP--SPRRSCHNHVFRAQGEPSEKSLEIMRKISES-------------------KQGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRES

Query:  LP-HCHIF
           HC +F
Subjt:  LP-HCHIF

Q6K471 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

2.0e-20

53.33

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Query:  PSPR-RSCHNHV--FRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRESLP-
        P PR R C   V    A  + S+KSLEIMRK SE                     +GL+DHKD LG PLCPCRHYD+KA EVAQGFWNCPCVPMRE    
Subjt:  PSPR-RSCHNHV--FRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRESLP-

Query:  HCHIF
        HC +F
Subjt:  HCHIF

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic

8.6e-24

50.42

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Query:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGF
        LQ+   S   ++ PL G +PR S    V RA+ EPSEKS+EIMRK SE                     +GL++HKD+ G PLCPCRHYD+KA EV QGF
Subjt:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGF

Query:  WNCPCVPMRESLP-HCHIF
        WNCPCVPMRE    HC +F
Subjt:  WNCPCVPMRESLP-HCHIF

Arabidopsis top hits

e value

%identity

Alignment

AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein

6.1e-25

50.42

Show/hide

Query:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGF
        LQ+   S   ++ PL G +PR S    V RA+ EPSEKS+EIMRK SE                     +GL++HKD+ G PLCPCRHYD+KA EV QGF
Subjt:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESK-------------------QGLSDHKDTLGEPLCPCRHYDEKAFEVAQGF

Query:  WNCPCVPMRESLP-HCHIF
        WNCPCVPMRE    HC +F
Subjt:  WNCPCVPMRESLP-HCHIF

Sequences

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CDS sequence

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ATGCACTTACAATTAAGAACTGATGAAAATTCCAAATTGCTCCCTCTTCTGCATCTTCTTCAATCGACATTCGACTCAACCGACAATATCGCCGTTCCACTCTCCGGTCC
TTCCCCCAGACGTTCCTGTCACAACCATGTCTTTCGAGCTCAAGGAGAACCGTCTGAGAAGTCGCTCGAAATAATGAGGAAAATCTCAGAATCTAAACAAGGACTGTCAG
ATCACAAAGATACATTGGGTGAACCACTTTGTCCCTGTCGGCATTATGATGAAAAAGCTTTTGAGGTTGCACAAGGTTTTTGGAACTGTCCATGTGTTCCTATGAGAGAA
AGTTTGCCTCATTGTCACATTTTCACATTTAGCTTGCGAGAAGACACTACAAGAAATTTAGCCTATTATAGCTTTTGA

mRNA sequence

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Protein sequence

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MHLQLRTDENSKLLPLLHLLQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPSEKSLEIMRKISESKQGLSDHKDTLGEPLCPCRHYDEKAFEVAQGFWNCPCVPMRE
SLPHCHIFTFSLREDTTRNLAYYSF

Tan0012577 (gene) of Snake gourd v1 genome