; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012579 (gene) of Snake gourd v1 genome

Gene IDTan0012579
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationLG05:62263747..62264733
RNA-Seq ExpressionTan0012579
SyntenyTan0012579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]9.2e-7456.14Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY+K DS  E+V  ++PL+  + 
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS

Query:  GSRLKEPDSGRDRNSEGKLHNAAHEDS------------------------------------------ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKS
          +LK   S     S G  H+   E S                                          + RTKDGFDPKA+KL++KAGY+F THTEFKS
Subjt:  GSRLKEPDSGRDRNSEGKLHNAAHEDS------------------------------------------ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKS

Query:  LKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR
        LKI +E+P+LS TQKKLL+EG+ IP SRKGLGYKSPE + I RK K K  D NHI V EVD    KE   ++TS F R+   VAR
Subjt:  LKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]3.6e-7051.25Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY K ++I E++P + PL K   
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S

Query:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------
         S+LK     EP +S R  NS +G+ +            NAA+                                                         
Subjt:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------

Query:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK
           + RTKDGFDPKA+KL++KAGY+FT HTEFKSL+I ++RPELS TQKKLL+EG++IP SRKGLGYKSPE + I +K K K  D NHI ++E D++ VK
Subjt:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK

Query:  ENVTRKTSVFSRVGSLVARP
        E   ++ SVF R+   VARP
Subjt:  ENVTRKTSVFSRVGSLVARP

XP_031737372.1 uncharacterized protein LOC116402244 [Cucumis sativus]3.6e-7051.25Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY K ++I E++P + PL K   
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S

Query:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------
         S+LK     EP +S R  NS +G+ +            NAA+                                                         
Subjt:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------

Query:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK
           + RTKDGFDPKA+KL++KAGY+FT HTEFKSL+I ++RPELS TQKKLL+EG++IP SRKGLGYKSPE + I +K K K  D NHI ++E D++ VK
Subjt:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK

Query:  ENVTRKTSVFSRVGSLVARP
        E   ++ SVF R+   VARP
Subjt:  ENVTRKTSVFSRVGSLVARP

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.6e-7051.25Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY K ++I E++P + PL K   
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S

Query:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------
         S+LK     EP +S R  NS +G+ +            NAA+                                                         
Subjt:  GSRLK-----EP-DSGRDRNS-EGKLH------------NAAHED-------------------------------------------------------

Query:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK
           + RTKDGFDPKA+KL++KAGY+FT HTEFKSL+I ++RPELS TQKKLL+EG++IP SRKGLGYKSPE + I +K K K  D NHI ++E D++ VK
Subjt:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK

Query:  ENVTRKTSVFSRVGSLVARP
        E   ++ SVF R+   VARP
Subjt:  ENVTRKTSVFSRVGSLVARP

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]2.8e-7051.25Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY K ++I E++P + PL K   
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIK--S

Query:  GSRLK-----EP-------DSGRDR----NSEG---KLHNAAHED-------------------------------------------------------
         S+LK     EP       +SG+      N++G   K  NAA+                                                         
Subjt:  GSRLK-----EP-------DSGRDR----NSEG---KLHNAAHED-------------------------------------------------------

Query:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK
           + RTKDGFDPKA+KL++KAGY+FT HTEFKSL+I ++RPELS TQKKLL+EG++IP SRKGLGYKSPE + I +K K K  D NHI ++E D++ VK
Subjt:  --SESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK

Query:  ENVTRKTSVFSRVGSLVARP
        E   ++ SVF R+   VARP
Subjt:  ENVTRKTSVFSRVGSLVARP

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein6.3e-6852.58Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIKSG-
        MIRLELIIGDLKA  LFH+ID +TTYKLLL RPWIHGNGVVTS LHQCFKFYQDG+KKV  D  PFSEAESHFADAKFY+K D+  E V  ++PL K+  
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIKSG-

Query:  ------------------------SRLKEPDSGRDRNSEG-------------------------KLHNAAHEDSESRTKDGFDPKAHKLLSKAGYNFTT
                                SR K+ +S   ++ +G                         K+        +S TKDGFDPKA+KL++K GY+FTT
Subjt:  ------------------------SRLKEPDSGRDRNSEG-------------------------KLHNAAHEDSESRTKDGFDPKAHKLLSKAGYNFTT

Query:  HTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR
        H EFKSLKI +E+P+LS TQKKLL+EG+ IP SRKGLGYKSPE + I RK K K  D NHI V EVD    KE   ++TS F R+   VAR
Subjt:  HTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR

A0A5A7UD46 Uncharacterized protein9.6e-6949.22Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS
        MIRLELIIGDLK   LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY+K DS  E+V  ++ L+  + 
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS

Query:  GSRLKEPDSGRDRNSEGKLHNAAHEDS-------------------------------------------------------------------------
          +LK   S     S G  H+   E S                                                                         
Subjt:  GSRLKEPDSGRDRNSEGKLHNAAHEDS-------------------------------------------------------------------------

Query:  ---ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK
           + RTKDGFDPKA+KL++KAGY+FTTHTEFKSLKI+ E+P+LS TQKKLL+EG+ IP SRKGLGYKSPE + I RK K K  D+NHI + E D    K
Subjt:  ---ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVK

Query:  ENVTRKTSVFSRVGSLVAR
        E  +++TS F R+   VAR
Subjt:  ENVTRKTSVFSRVGSLVAR

A0A5A7UMH1 Uncharacterized protein1.9e-6959.84Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTK--IPLIKS
        MI LELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV TD+ PFSEAESHFADAKFY+K DS  + V  K   P ++S
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTK--IPLIKS

Query:  GSRLKEPDSGRDRNS-----------EGKLHNAAHEDSESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGL
           LK  D    + S           E K+        + RTKDGFDPKA+KL++KAGY+FTTH EF+ LKI +E+ +LS T+KKLL+EG+ IP SRKGL
Subjt:  GSRLKEPDSGRDRNS-----------EGKLHNAAHEDSESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGL

Query:  GYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR
        GYKSPE + I  K K K  D NHI V EVD    KE  +++TS F R+   V R
Subjt:  GYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR

A0A5A7UMY2 Reverse transcriptase domain-containing protein4.5e-7456.14Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS
        MIRLELIIGDLKA  LFH+IDS+TTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSEAESHFADAKFY+K DS  E+V  ++PL+  + 
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS

Query:  GSRLKEPDSGRDRNSEGKLHNAAHEDS------------------------------------------ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKS
          +LK   S     S G  H+   E S                                          + RTKDGFDPKA+KL++KAGY+F THTEFKS
Subjt:  GSRLKEPDSGRDRNSEGKLHNAAHEDS------------------------------------------ESRTKDGFDPKAHKLLSKAGYNFTTHTEFKS

Query:  LKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR
        LKI +E+P+LS TQKKLL+EG+ IP SRKGLGYKSPE + I RK K K  D NHI V EVD    KE   ++TS F R+   VAR
Subjt:  LKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR

A0A5D3BSG5 Uncharacterized protein4.3e-6952.01Show/hide
Query:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS
        MI LELIIGDLK   LFH+IDS+ TYKLLLGR WIHGNGVVTSTLHQCFKFYQDGVKKV  D+ PFSE ESHFADAKFY+K DS  E V  ++PL+  + 
Subjt:  MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLI--KS

Query:  GSRLKEPDSGRDRNSEGKLHNAAHEDSES-------------------------------------------------------RTKDGFDPKAHKLLSK
          +LK   S   +   G  H+   E S S                                                       RTKDGFDPKA+KL++K
Subjt:  GSRLKEPDSGRDRNSEGKLHNAAHEDSES-------------------------------------------------------RTKDGFDPKAHKLLSK

Query:  AGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR
        AGY+FTTHTEFKSLKI +E+P+LS TQKKLL+EG+ IP SRKGLGYKSPE + I RK K K  D+NHI V EVD     E  +++TS F R+   VAR
Subjt:  AGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSGVKENVTRKTSVFSRVGSLVAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACGCTTAGAGCTTATCATTGGGGACCTCAAGGCTGACACCTTGTTCCACATCATAGACTCCAAGACTACCTATAAGTTGCTACTAGGTCGTCCTTGGATTCATGG
AAATGGAGTTGTAACTTCTACGTTACACCAGTGCTTCAAGTTTTACCAAGATGGTGTCAAGAAGGTGGTGACGGATACCAAGCCATTTTCAGAAGCTGAGTCCCATTTTG
CTGACGCGAAATTTTACATGAAGGCTGACAGTATAGGGGAGATTGTACCAACAAAGATCCCTTTAATAAAGAGTGGCAGTCGACTTAAGGAGCCTGACAGTGGGCGAGAT
CGAAATTCTGAAGGGAAGCTTCACAATGCCGCTCACGAAGATAGCGAAAGTCGAACGAAAGATGGGTTTGACCCTAAGGCGCATAAACTCCTATCAAAGGCAGGATACAA
CTTCACAACTCACACCGAGTTCAAAAGTCTGAAGATTTTCAACGAGAGACCGGAGCTCTCATTAACACAAAAGAAACTTCTAAAGGAAGGCTATACTATCCCTGCGTCAA
GAAAGGGATTGGGATACAAGTCTCCTGAGTCAGTCCACATAATAAGAAAAGATAAGGCAAAGGCGGCAGACGCAAACCACATAGCAGTGGATGAGGTAGACGATTCAGGT
GTAAAGGAAAACGTCACCCGAAAGACTTCTGTTTTTAGCCGCGTCGGGTCGTTGGTGGCACGACCTTCAACCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATACGCTTAGAGCTTATCATTGGGGACCTCAAGGCTGACACCTTGTTCCACATCATAGACTCCAAGACTACCTATAAGTTGCTACTAGGTCGTCCTTGGATTCATGG
AAATGGAGTTGTAACTTCTACGTTACACCAGTGCTTCAAGTTTTACCAAGATGGTGTCAAGAAGGTGGTGACGGATACCAAGCCATTTTCAGAAGCTGAGTCCCATTTTG
CTGACGCGAAATTTTACATGAAGGCTGACAGTATAGGGGAGATTGTACCAACAAAGATCCCTTTAATAAAGAGTGGCAGTCGACTTAAGGAGCCTGACAGTGGGCGAGAT
CGAAATTCTGAAGGGAAGCTTCACAATGCCGCTCACGAAGATAGCGAAAGTCGAACGAAAGATGGGTTTGACCCTAAGGCGCATAAACTCCTATCAAAGGCAGGATACAA
CTTCACAACTCACACCGAGTTCAAAAGTCTGAAGATTTTCAACGAGAGACCGGAGCTCTCATTAACACAAAAGAAACTTCTAAAGGAAGGCTATACTATCCCTGCGTCAA
GAAAGGGATTGGGATACAAGTCTCCTGAGTCAGTCCACATAATAAGAAAAGATAAGGCAAAGGCGGCAGACGCAAACCACATAGCAGTGGATGAGGTAGACGATTCAGGT
GTAAAGGAAAACGTCACCCGAAAGACTTCTGTTTTTAGCCGCGTCGGGTCGTTGGTGGCACGACCTTCAACCCTTTAA
Protein sequenceShow/hide protein sequence
MIRLELIIGDLKADTLFHIIDSKTTYKLLLGRPWIHGNGVVTSTLHQCFKFYQDGVKKVVTDTKPFSEAESHFADAKFYMKADSIGEIVPTKIPLIKSGSRLKEPDSGRD
RNSEGKLHNAAHEDSESRTKDGFDPKAHKLLSKAGYNFTTHTEFKSLKIFNERPELSLTQKKLLKEGYTIPASRKGLGYKSPESVHIIRKDKAKAADANHIAVDEVDDSG
VKENVTRKTSVFSRVGSLVARPSTL