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Tan0012599 (gene) of Snake gourd v1 genome

Gene IDTan0012599
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:46186899..46191598
RNA-Seq ExpressionTan0012599
SyntenyTan0012599
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]2.5e-0741.12Show/hide
Query:  GVFGGPHYIV-RVNVGCLGRALHNVD--------CRDRAPAPN------------------YRHSPLKLHKLNTLYVAGSTGIVREVNDVCWLHAVYRDK
        GV GGPHYIV  VNVGC GR LH++D          D  P                     Y+ S ++       +   S GIVRE NDVCWLHAV+R K
Subjt:  GVFGGPHYIV-RVNVGCLGRALHNVD--------CRDRAPAPN------------------YRHSPLKLHKLNTLYVAGSTGIVREVNDVCWLHAVYRDK

Query:  LAGSSRG
        +AG S G
Subjt:  LAGSSRG
TrEMBL top hitse value%identityAlignment
A0A5D3CAC6 Uncharacterized protein1.2e-0741.12Show/hide
Query:  GVFGGPHYIV-RVNVGCLGRALHNVD--------CRDRAPAPN------------------YRHSPLKLHKLNTLYVAGSTGIVREVNDVCWLHAVYRDK
        GV GGPHYIV  VNVGC GR LH++D          D  P                     Y+ S ++       +   S GIVRE NDVCWLHAV+R K
Subjt:  GVFGGPHYIV-RVNVGCLGRALHNVD--------CRDRAPAPN------------------YRHSPLKLHKLNTLYVAGSTGIVREVNDVCWLHAVYRDK

Query:  LAGSSRG
        +AG S G
Subjt:  LAGSSRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCTTTGGCGGGCCCCACTACATCGTGAGAGTAAACGTTGGTTGTCTTGGTCGTGCCCTACACAACGTGGATTGTAGAGATCGAGCTCCGGCACCGAATTATCG
CCATAGTCCTTTGAAGCTTCATAAGTTAAATACTTTGTACGTGGCTGGGTCAACAGGTATCGTTAGAGAGGTGAACGATGTTTGTTGGCTTCACGCCGTCTACCGGGATA
AGTTAGCAGGTAGTTCGAGAGGGGTCTTCGTCCCACACGGAGTCGACTTCACACGCCGCAACATCCTTCCCTTTGTTCGCCTCCAATGTCGCTTGCAACGCCTTCAAGGT
CGCTCGATTCGGGCAGTCGCGCACACGATGTGTAACGACCCTACTTTTATAGACTCTCTTTCTAAGGATCATTACTATCATGCATGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTCTTTGGCGGGCCCCACTACATCGTGAGAGTAAACGTTGGTTGTCTTGGTCGTGCCCTACACAACGTGGATTGTAGAGATCGAGCTCCGGCACCGAATTATCG
CCATAGTCCTTTGAAGCTTCATAAGTTAAATACTTTGTACGTGGCTGGGTCAACAGGTATCGTTAGAGAGGTGAACGATGTTTGTTGGCTTCACGCCGTCTACCGGGATA
AGTTAGCAGGTAGTTCGAGAGGGGTCTTCGTCCCACACGGAGTCGACTTCACACGCCGCAACATCCTTCCCTTTGTTCGCCTCCAATGTCGCTTGCAACGCCTTCAAGGT
CGCTCGATTCGGGCAGTCGCGCACACGATGTGTAACGACCCTACTTTTATAGACTCTCTTTCTAAGGATCATTACTATCATGCATGCATTTGA
Protein sequenceShow/hide protein sequence
MGVFGGPHYIVRVNVGCLGRALHNVDCRDRAPAPNYRHSPLKLHKLNTLYVAGSTGIVREVNDVCWLHAVYRDKLAGSSRGVFVPHGVDFTRRNILPFVRLQCRLQRLQG
RSIRAVAHTMCNDPTFIDSLSKDHYYHACI