CuGenDBv2

Gene ID	Tan0012606
Organism	Trichosanthes anguina (Snake gourd v1)
Description	photosystem II reaction center protein H
Genome location	Contig00127:49593..49814
RNA-Seq Expression	Tan0012606
Synteny	Tan0012606
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0050821 - protein stabilization (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0042301 - phosphate ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

ALO21758.1 PsbH [Cucurbita argyrosperma]

1.4e-30

98.63

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLF IFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

YP_009317415.1 photosystem II protein H [Coccinia grandis]

1.1e-30

98.63

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTV+DSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

YP_009447479.1 photosystem II protein H [Cucurbita maxima]

4.9e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

YP_009456090.1 photosystem II protein H [Momordica charantia]

1.9e-30

98.63

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

YP_009753118.1 photosystem II subunit H [Corallocarpus boehmii]

1.9e-30

98.63

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVG+LLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IGM9 Photosystem II reaction center protein H

2.4e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

A0A346QN61 Photosystem II reaction center protein H

2.4e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

A0A410HFB6 Photosystem II reaction center protein H

2.4e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

A0A6H0ERB6 Photosystem II reaction center protein H

2.4e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

A0A6M3RU29 Photosystem II reaction center protein H

2.4e-31

100

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

SwissProt top hits

e value

%identity

Alignment

Q2PMQ6 Photosystem II reaction center protein H

3.5e-32

94.52

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVED+SRSGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFLSIILEIYNSSILLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Q3C1M6 Photosystem II reaction center protein H

3.0e-31

91.78

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE+SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Q49KW9 Photosystem II reaction center protein H

1.3e-31

93.15

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE SSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Q4VZI9 Photosystem II reaction center protein H

7.9e-32

93.15

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTV+DSS+SGPRRT+VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFAIFL IILEIYNSSILLDGISSN
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Q7FNS3 Photosystem II reaction center protein H

3.0e-31

91.78

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVE+SSRSGPRRT VGDLLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Arabidopsis top hits

e value

%identity

Alignment

ATCG00710.1 photosystem II reaction center protein H

2.4e-31

90.41

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Query:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN
        MATQTVEDSSRSGPR T VG LLKPLNSEYGKVAPGWGTTPLMGVAM LFA+FLSIILEIYNSS+LLDGIS N
Subjt:  MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Sequences

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CDS sequence

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ATGGCTACACAAACCGTTGAGGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGAACTACGCCTTTGATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATCTATTATTTTGGAGATTTATAATTCTTCCATTTTACTGGACGGAATTTCAAGCAATT
AG

mRNA sequence

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Protein sequence

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MATQTVEDSSRSGPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMGLFAIFLSIILEIYNSSILLDGISSN

Tan0012606 (gene) of Snake gourd v1 genome