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Tan0012618 (gene) of Snake gourd v1 genome

Gene IDTan0012618
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:6855614..6856068
RNA-Seq ExpressionTan0012618
SyntenyTan0012618
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048112.1 hypothetical protein E6C27_scaffold385G001910 [Cucumis melo var. makuwa]4.5e-2360.47Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF
        MT D SHC+E+ QFP PL+QWA+WCW S  S  S CC F+LDHIGIV L+E  NCLH+ LPDL +++SA L+SS   WI   GLKF
Subjt:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF

KGN61018.1 hypothetical protein Csa_021204 [Cucumis sativus]2.0e-3157.85Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLK------FCCKTHNPP
        MT D  HC+E+ Q P PL+QWA+WCW S  S  S CC F+LDHIGIV L+EVRNCLH+ LPDL +++SA L+SS    I   GLK      F CKTHNP 
Subjt:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLK------FCCKTHNPP

Query:  FDGIFDRSVAVLQGRPRQSRQ
        FDGIFD S AVL G P+   Q
Subjt:  FDGIFDRSVAVLQGRPRQSRQ

TYJ96440.1 hypothetical protein E5676_scaffold546G00740 [Cucumis melo var. makuwa]1.1e-2159.77Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALW-CWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF
        MT D SHC+E+ QFP PL+QWA+W CW S  S  S CC F+LDHIGIV L+E  NCLH+ LPDL +++SA L+SS   WI   GLKF
Subjt:  MTGDHSHCDENPQFPFPLNQWALW-CWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF

TrEMBL top hitse value%identityAlignment
A0A0A0LH07 Uncharacterized protein9.9e-3257.85Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLK------FCCKTHNPP
        MT D  HC+E+ Q P PL+QWA+WCW S  S  S CC F+LDHIGIV L+EVRNCLH+ LPDL +++SA L+SS    I   GLK      F CKTHNP 
Subjt:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLK------FCCKTHNPP

Query:  FDGIFDRSVAVLQGRPRQSRQ
        FDGIFD S AVL G P+   Q
Subjt:  FDGIFDRSVAVLQGRPRQSRQ

A0A5A7TX74 Uncharacterized protein2.2e-2360.47Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF
        MT D SHC+E+ QFP PL+QWA+WCW S  S  S CC F+LDHIGIV L+E  NCLH+ LPDL +++SA L+SS   WI   GLKF
Subjt:  MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF

A0A5D3B998 Uncharacterized protein5.4e-2259.77Show/hide
Query:  MTGDHSHCDENPQFPFPLNQWALW-CWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF
        MT D SHC+E+ QFP PL+QWA+W CW S  S  S CC F+LDHIGIV L+E  NCLH+ LPDL +++SA L+SS   WI   GLKF
Subjt:  MTGDHSHCDENPQFPFPLNQWALW-CWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGCGACCACAGCCATTGCGACGAGAATCCTCAATTCCCTTTTCCTCTCAACCAATGGGCTCTCTGGTGTTGGCGGTCTGCAGAAAGCCGCCCCTCTGGGTGCTG
TCCTTTCAACCTCGACCATATTGGCATAGTCTCTTTGGTTGAAGTAAGAAATTGCCTGCACAAACGCTTGCCTGACTTGGTTGCATCCAATTCTGCAATTCTCAAGAGCA
GCGCTTGTTGCTGGATCAGATGTACTGGCTTGAAGTTCTGTTGCAAAACCCATAATCCTCCATTTGACGGCATATTCGATCGATCCGTTGCTGTGTTGCAGGGTCGCCCA
AGACAGAGCAGACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGGCGACCACAGCCATTGCGACGAGAATCCTCAATTCCCTTTTCCTCTCAACCAATGGGCTCTCTGGTGTTGGCGGTCTGCAGAAAGCCGCCCCTCTGGGTGCTG
TCCTTTCAACCTCGACCATATTGGCATAGTCTCTTTGGTTGAAGTAAGAAATTGCCTGCACAAACGCTTGCCTGACTTGGTTGCATCCAATTCTGCAATTCTCAAGAGCA
GCGCTTGTTGCTGGATCAGATGTACTGGCTTGAAGTTCTGTTGCAAAACCCATAATCCTCCATTTGACGGCATATTCGATCGATCCGTTGCTGTGTTGCAGGGTCGCCCA
AGACAGAGCAGACAATGA
Protein sequenceShow/hide protein sequence
MTGDHSHCDENPQFPFPLNQWALWCWRSAESRPSGCCPFNLDHIGIVSLVEVRNCLHKRLPDLVASNSAILKSSACCWIRCTGLKFCCKTHNPPFDGIFDRSVAVLQGRP
RQSRQ