; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012627 (gene) of Snake gourd v1 genome

Gene IDTan0012627
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG05:74109509..74109943
RNA-Seq ExpressionTan0012627
SyntenyTan0012627
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022954425.1 S-protein homolog 74-like [Cucurbita moschata]1.5e-3657.81Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLVVHCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ SG VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

XP_022954427.1 S-protein homolog 74-like [Cucurbita moschata]5.0e-3556.25Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLV HCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ  G VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

XP_022954429.1 S-protein homolog 74-like [Cucurbita moschata]7.7e-3657.03Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLV HCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ SG VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

XP_023001658.1 S-protein homolog 74-like [Cucurbita maxima]7.9e-4155.41Show/hide
Query:  MKLLNIFCFILLLAFESN-IIKPCFA---ASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQV
        M+ +N  CFILLL   SN ++KPCFA    SK+QLPFS+WQVTI N M  STL+VHCKSKD+DLG H +  G+ Y   FKEN W++T +WC FSSKYGQV
Subjt:  MKLLNIFCFILLLAFESN-IIKPCFA---ASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQV

Query:  SGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +GDVFWPE+G+ LS +C+ ++C+W   D GI+L     N++++ Y WK
Subjt:  SGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK

XP_023542206.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]8.5e-3558.04Show/hide
Query:  FSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLA
        FS W+V IVN +  STLV HCKSK DDLGEHV+  G+KY W F EN W++TLYWC+FSSK GQ SG VFWPEK  WLS +C+ N+CIW   D GI + + 
Subjt:  FSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLA

Query:  PFNAFRIMYHWK
         F  + ++Y WK
Subjt:  PFNAFRIMYHWK

TrEMBL top hitse value%identityAlignment
A0A6J1C659 S-protein homolog2.0e-3455.12Show/hide
Query:  IKPCFAASKLQLPFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSC
        IK     S  Q P S WQVTI N L  ++ L VHCKSKDDDLGEHV+    +Y+W FKENFW++TL+WC+F S YG  SG+VFWPEK  WL+ +CD ++C
Subjt:  IKPCFAASKLQLPFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSC

Query:  IW-GGGDQGIYLHLAPFNAFRIMYHWK
        IW   GDQGIYL   P   F + Y W+
Subjt:  IW-GGGDQGIYLHLAPFNAFRIMYHWK

A0A6J1GQZ0 S-protein homolog2.4e-3556.25Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLV HCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ  G VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

A0A6J1GSD6 S-protein homolog7.5e-3757.81Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLVVHCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ SG VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

A0A6J1GSZ3 S-protein homolog3.7e-3657.03Show/hide
Query:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN
        II  CFA S   L   FS W+V IVN +  STLV HCKSKDDDLGEHV+  G+KY W F EN  ++TLYWC+FSSK GQ SG VFWPEK  WLS +C+ N
Subjt:  IIKPCFAASKLQL--PFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHN

Query:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +CIW   D GI + L  F  + ++Y WK
Subjt:  SCIWGGGDQGIYLHLAPFNAFRIMYHWK

A0A6J1KR58 S-protein homolog3.8e-4155.41Show/hide
Query:  MKLLNIFCFILLLAFESN-IIKPCFA---ASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQV
        M+ +N  CFILLL   SN ++KPCFA    SK+QLPFS+WQVTI N M  STL+VHCKSKD+DLG H +  G+ Y   FKEN W++T +WC FSSKYGQV
Subjt:  MKLLNIFCFILLLAFESN-IIKPCFA---ASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQV

Query:  SGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK
        +GDVFWPE+G+ LS +C+ ++C+W   D GI+L     N++++ Y WK
Subjt:  SGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 65.2e-1146.25Show/hide
Query:  LVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIY
        L VHCKS+DDD G H+L  G  Y W F  NF  STLY+C FS +  QV   VF   K    S +C   +C W   + GIY
Subjt:  LVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIY

F4JLQ5 S-protein homolog 21.8e-1140Show/hide
Query:  PFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIW
        P SK  V I N L +  TL+ HCKSKDDDLG   L  GE + ++F   F+  TLY+CSFS      S D++   + +    +C+ + C+W
Subjt:  PFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIW

F4JLS0 S-protein homolog 12.2e-1736.15Show/hide
Query:  KLLNIFCFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGD
        + L   CF L L  + +++        + +P  S+WQVT+VN L +  TL +HCKSK+DDLGE  L    ++ W F EN   ST +WC  +   G ++ +
Subjt:  KLLNIFCFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGD

Query:  VFWPEKGTWLSKQCDHNSCIWGGGDQGIYL
        VFW +    L  +C   +CIW     G+YL
Subjt:  VFWPEKGTWLSKQCDHNSCIWGGGDQGIYL

P0DN92 S-protein homolog 241.5e-1033.33Show/hide
Query:  MKLLNIFCFILLLAFESNIIKPCFAASKLQLPFSK-------WQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKY
        + L + FC I ++   S ++     +  LQ+  +K        +VTI N  +   L +HCKS+DDDLG H+LA GE + W F  NF  STLY+C FS   
Subjt:  MKLLNIFCFILLLAFESNIIKPCFAASKLQLPFSK-------WQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKY

Query:  GQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHW
        GQ+   VF   +      +C   +C W     GIY +        + Y+W
Subjt:  GQVSGDVFWPEKGTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHW

Q2HQ46 S-protein homolog 741.5e-1833.81Show/hide
Query:  CFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEK
        CF L+L  + +++        + +P  S+WQVT+ N L +  TL +HCKSK++DLG+  L   +++ W F EN   STL+WC  S   G ++  VFW + 
Subjt:  CFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEK

Query:  GTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK
           L  +CD  +C+W   + G+YL  +      +   WK
Subjt:  GTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.4e-1133.04Show/hide
Query:  MKLLNIFCFILLLAFESNI--IKPCFAASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSG
        M+ ++I CF   L F S    + P + A+          VT+ NL+    L +HCKSK DDLG HV+   ++Y + F+ N W+STL++CSF       S 
Subjt:  MKLLNIFCFILLLAFESNI--IKPCFAASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSG

Query:  DVFWPEKGTWLSKQC
        D++  ++   +   C
Subjt:  DVFWPEKGTWLSKQC

AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-1240Show/hide
Query:  PFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIW
        P SK  V I N L +  TL+ HCKSKDDDLG   L  GE + ++F   F+  TLY+CSFS      S D++   + +    +C+ + C+W
Subjt:  PFSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLSKQCDHNSCIW

AT4G16295.1 S-protein homologue 11.5e-1836.15Show/hide
Query:  KLLNIFCFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGD
        + L   CF L L  + +++        + +P  S+WQVT+VN L +  TL +HCKSK+DDLGE  L    ++ W F EN   ST +WC  +   G ++ +
Subjt:  KLLNIFCFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGD

Query:  VFWPEKGTWLSKQCDHNSCIWGGGDQGIYL
        VFW +    L  +C   +CIW     G+YL
Subjt:  VFWPEKGTWLSKQCDHNSCIWGGGDQGIYL

AT4G29035.1 Plant self-incompatibility protein S1 family1.1e-1933.81Show/hide
Query:  CFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEK
        CF L+L  + +++        + +P  S+WQVT+ N L +  TL +HCKSK++DLG+  L   +++ W F EN   STL+WC  S   G ++  VFW + 
Subjt:  CFILLLAFESNIIKPCFAASKLQLP-FSKWQVTIVN-LMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEK

Query:  GTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK
           L  +CD  +C+W   + G+YL  +      +   WK
Subjt:  GTWLSKQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK

AT5G04350.1 Plant self-incompatibility protein S1 family1.1e-1134.4Show/hide
Query:  NIFCFILLLAFESNIIKPCFAASKLQLPFSKWQVTIVNLMSASTLV-VHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWP
        N+F F       S +I  C   S       + +V + N +  S L+ VHC+SKDDDLGEH+L  G+ Y++TF +N W++T + C             F  
Subjt:  NIFCFILLLAFESNIIKPCFAASKLQLPFSKWQVTIVNLMSASTLV-VHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWP

Query:  EKGTWLSKQCDHNSCIWGGGDQGIY
         + +W SK  +  SC W G + GIY
Subjt:  EKGTWLSKQCDHNSCIWGGGDQGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTCTAAACATCTTTTGTTTCATCTTATTACTTGCTTTTGAATCAAACATTATCAAGCCATGTTTTGCAGCATCCAAGCTACAACTTCCATTCTCCAAGTGGCA
AGTGACCATTGTGAACCTGATGTCGGCTTCGACTCTGGTTGTTCATTGCAAGTCGAAAGATGACGATCTGGGCGAGCACGTACTCGCCACCGGAGAAAAATACGACTGGA
CGTTTAAAGAAAATTTTTGGCGATCGACATTGTATTGGTGCAGTTTCAGCAGCAAATATGGGCAAGTTTCTGGTGATGTTTTCTGGCCAGAGAAAGGAACCTGGCTTAGT
AAACAATGTGATCATAATAGCTGCATTTGGGGTGGTGGAGACCAAGGGATTTATTTGCATCTTGCTCCTTTCAATGCGTTTAGAATAATGTACCATTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTCTAAACATCTTTTGTTTCATCTTATTACTTGCTTTTGAATCAAACATTATCAAGCCATGTTTTGCAGCATCCAAGCTACAACTTCCATTCTCCAAGTGGCA
AGTGACCATTGTGAACCTGATGTCGGCTTCGACTCTGGTTGTTCATTGCAAGTCGAAAGATGACGATCTGGGCGAGCACGTACTCGCCACCGGAGAAAAATACGACTGGA
CGTTTAAAGAAAATTTTTGGCGATCGACATTGTATTGGTGCAGTTTCAGCAGCAAATATGGGCAAGTTTCTGGTGATGTTTTCTGGCCAGAGAAAGGAACCTGGCTTAGT
AAACAATGTGATCATAATAGCTGCATTTGGGGTGGTGGAGACCAAGGGATTTATTTGCATCTTGCTCCTTTCAATGCGTTTAGAATAATGTACCATTGGAAATGA
Protein sequenceShow/hide protein sequence
MKLLNIFCFILLLAFESNIIKPCFAASKLQLPFSKWQVTIVNLMSASTLVVHCKSKDDDLGEHVLATGEKYDWTFKENFWRSTLYWCSFSSKYGQVSGDVFWPEKGTWLS
KQCDHNSCIWGGGDQGIYLHLAPFNAFRIMYHWK