CuGenDBv2

Gene ID	Tan0012676
Organism	Trichosanthes anguina (Snake gourd v1)
Description	50S ribosomal protein L2, chloroplastic
Genome location	LG11:22312655..22314141
RNA-Seq Expression	Tan0012676
Synteny	Tan0012676
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0015934 - large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR002171 - Ribosomal protein L2 IPR005880 - Ribosomal protein L2, bacterial/organellar-type IPR008991 - Translation protein SH3-like domain superfamily IPR012340 - Nucleic acid-binding, OB-fold IPR014726 - Ribosomal protein L2, domain 3 IPR022666 - Ribosomal Proteins L2, RNA binding domain IPR022669 - Ribosomal protein L2, C-terminal IPR022671 - Ribosomal protein L2, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QKQ12890.1 ribosomal protein L2 [Sophora flavescens]

3.4e-80

65.22

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLSA   LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009127566.1 ribosomal protein L2 [Lupinus albus]

7.6e-80

64.86

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Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009130362.1 ribosomal protein L2 [Quercus aliena]

1.0e-79

64.86

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Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P  ++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLSA   LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009437683.1 ribosomal protein L2 [Sophora alopecuroides]

7.6e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009762832.1 ribosomal protein L2 [Gleditsia japonica]

7.6e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

TrEMBL top hits

e value

%identity

Alignment

A0A161AMS4 50S ribosomal protein L2, chloroplastic

3.7e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A291B5M1 50S ribosomal protein L2, chloroplastic

3.7e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A6G9L4D0 50S ribosomal protein L2, chloroplastic

3.7e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A6G9L5Q0 50S ribosomal protein L2, chloroplastic

3.7e-80

64.86

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A6N0GSF5 50S ribosomal protein L2, chloroplastic

1.7e-80

65.22

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P K++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTIVS      KMGNALPLSA   LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

SwissProt top hits

e value

%identity

Alignment

B1A976 50S ribosomal protein L2, chloroplastic

4.7e-80

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRN AV+ Q  S P  ++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN
        YILHP GAIIGDTIVS      KMGNALPL          + +  LG+ GQLARA+   V++   K+ + ATLKLP G +          +GQVG   VN
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

B1NWJ1 50S ribosomal protein L2, chloroplastic

2.1e-80

62.23

Show/hide

Query:  MAIHLYKTSTPSTRNGAVEQSTSIPVKSI--------------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG
        MAIHLYKTSTPSTRNGAV+       ++                                       F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDG
Subjt:  MAIHLYKTSTPSTRNGAVEQSTSIPVKSI--------------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDG

Query:  EKRYILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-
        EKRYILHP GAIIGDTI+S      KMGNALPL          + +  LG+ GQLARA+   V++   K+ + ATLKLP G +          +GQVG  
Subjt:  EKRYILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-

Query:  WVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
         VNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  WVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q14F95 50S ribosomal protein L2-A, chloroplastic

1.2e-80

63.04

Show/hide

Query:  MAIHLYKTSTPSTRNGAVEQSTS-----------------------------------IPVKSIFDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+                                       +  K  F RNEK IYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVEQSTS-----------------------------------IPVKSIFDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV
        YILHP GAIIGDTI+S      KMGNALPLS    LG             GQLARA+   V++   K+ + ATLKLP G +          +GQVG   V
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPLSAKSHLGR------------GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WV

Query:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q2L944 50S ribosomal protein L2, chloroplastic

7.2e-81

64.36

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTP TRNGAV+ Q  S P  ++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN
        YILHP GAIIGDTIVS      KMGNALPL          + +  LGR GQLARA+   V++   K+ + ATLKLP G +          +GQVG   VN
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q4VZK5 50S ribosomal protein L2, chloroplastic

5.5e-81

64.36

Show/hide

Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P  ++                                  F RNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN
        YILHP GAIIGDTIVS      KMGNALPL          + +  LG+ GQLARA+   V++   K+ + ATLKLP G +          +GQVG   VN
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Arabidopsis top hits

e value

%identity

Alignment

AT2G44065.1 Ribosomal protein L2 family

8.0e-11

54.39

Show/hide

Query:  KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PWGYPALG
        K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PWG P  G
Subjt:  KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PWGYPALG

AT2G44065.2 Ribosomal protein L2 family

8.0e-11

54.39

Show/hide

Query:  KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PWGYPALG
        K L +AG   WLG RP VRGV MNP DHPHGGGEG++     +  T   PWG P  G
Subjt:  KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPAT---PWGYPALG

AT3G51190.1 Ribosomal protein L2 family

9.8e-09

30.59

Show/hide

Query:  DRNEKDIY--GRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPGGAIIGDTI-VSVRSSYKMGNALPL----------SAKSHLG-RGQLARASPV
        D  E++ Y  G +  I +DP R A +  + +        +K   +   G   G  +    +++  +GN LPL          + + H+G RG LARAS  
Subjt:  DRNEKDIY--GRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHPGGAIIGDTI-VSVRSSYKMGNALPL----------SAKSHLG-RGQLARASPV

Query:  F-VSETDCKKREIATLKLPYG----------RMIGQV-GKWVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--
        + +      +     +KLP G           MIGQV G    +K L +AG+          CW    PVVRGV MNPV+HPHGGG     G A   R  
Subjt:  F-VSETDCKKREIATLKLPYG----------RMIGQV-GKWVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--

Query:  KKPATPWGYPALGRRSRKR
        K      G  A  R  R+R
Subjt:  KKPATPWGYPALGRRSRKR

ATCG00830.1 ribosomal protein L2

4.0e-79

62.55

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Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P  ++                                  F RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN
        YILHP GAIIGDTIVS      KMGNALPL          + +  LGR GQLARA+   V++   K+ + ATLKLP G +          +GQVG   VN
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

ATCG01310.1 ribosomal protein L2

4.0e-79

62.55

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Query:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
        MAIHLYKTSTPSTRNGAV+ Q  S P  ++                                  F RN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKR
Subjt:  MAIHLYKTSTPSTRNGAVE-QSTSIPVKSI----------------------------------FDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKR

Query:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN
        YILHP GAIIGDTIVS      KMGNALPL          + +  LGR GQLARA+   V++   K+ + ATLKLP G +          +GQVG   VN
Subjt:  YILHPGGAIIGDTIVS-VRSSYKMGNALPL----------SAKSHLGR-GQLARASPVFVSETDCKKREIATLKLPYGRM----------IGQVGK-WVN

Query:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  QKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Sequences

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CDS sequence

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ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGAGCAGTCAACGTCTATACCAGTAAAATCGATTTTCGACCGGAATGAAAAAGACAT
ATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCGGAGGGGCTA
TAATTGGAGATACCATTGTTTCAGTGCGAAGTTCCTATAAAATGGGAAATGCCCTACCTTTGAGTGCGAAATCACACTTGGGAAGGGGACAATTAGCTAGAGCAAGCCCA
GTCTTTGTAAGTGAAACCGATTGCAAAAAGAGGGAAATCGCCACATTAAAATTACCTTACGGGAGAATGATCGGACAAGTGGGGAAATGGGTAAACCAGAAAAGTTTGGG
TAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTA
GAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA

mRNA sequence

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Protein sequence

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MAIHLYKTSTPSTRNGAVEQSTSIPVKSIFDRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPGGAIIGDTIVSVRSSYKMGNALPLSAKSHLGRGQLARASP
VFVSETDCKKREIATLKLPYGRMIGQVGKWVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Tan0012676 (gene) of Snake gourd v1 genome