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Tan0012725 (gene) of Snake gourd v1 genome

Gene IDTan0012725
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 9
Genome locationLG01:72382714..72383160
RNA-Seq ExpressionTan0012725
SyntenyTan0012725
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650705.1 hypothetical protein Csa_010421 [Cucumis sativus]1.2e-1555.42Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  TL+F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK

XP_022136918.1 uncharacterized protein LOC111008495 [Momordica charantia]5.7e-1844.23Show/hide
Query:  KGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDEKENDT---YGK
        KGS L+F+GIL V    I ITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR   + ID +EK        ID+ E+D    + +
Subjt:  KGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDEKENDT---YGK

Query:  EKRIKTDDKK--------DIVDGEIEKIHNDDAGNGVIGSEEKSVETNTLKINITN
           IK DDK+        D ++ + EK     AG+ +  SEEK    N LK+++ N
Subjt:  EKRIKTDDKK--------DIVDGEIEKIHNDDAGNGVIGSEEKSVETNTLKINITN

XP_022159360.1 uncharacterized protein LOC111025777 [Momordica charantia]1.5e-2351.47Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTY---GKEKRI
        MAI KGS  IFVGIL  C+  I ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS++ID  E I E + +      K K +
Subjt:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTY---GKEKRI

Query:  KTDDKKDIVDGEIEKIHNDDAGNGVIGSEEKSVETN
        K+D K D++ G  EKI   DA N V  S+EK + ++
Subjt:  KTDDKKDIVDGEIEKIHNDDAGNGVIGSEEKSVETN

XP_022942029.1 auxin-induced in root cultures protein 12-like [Cucurbita moschata]9.1e-1642.42Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAIT--NANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDEKENDTYGKEKRIK
        MAI   + L+  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG  S V++  EKID K ND    E +  
Subjt:  MAIIKGSTLIFVGILFVCIDTIAIT--NANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDEKENDTYGKEKRIK

Query:  TDD---KKDIVDGEIEKIHN---DDAGNGVIG
        TD+   K   V     KI+    ++  +G++G
Subjt:  TDD---KKDIVDGEIEKIHN---DDAGNGVIG

XP_022988993.1 auxin-induced in root cultures protein 12-like [Cucurbita maxima]1.2e-1246.32Show/hide
Query:  ITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH
        IT  N+I Y  +K D+SPGCS KHP LC   E N YQRGC+AI++CR G ++I+  EKID K +D    E +  TD+     K+ +V G   KI+
Subjt:  ITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L8B1 Uncharacterized protein5.7e-1655.42Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK
        M + K  TL+F+GIL V  D I ITNA  +I+YG +  GD+SPGCS  HPELC     NPYQRGC+ IDRCR G+++ID +E+
Subjt:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK

A0A6J1C8U5 uncharacterized protein LOC1110084952.7e-1844.23Show/hide
Query:  KGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDEKENDT---YGK
        KGS L+F+GIL V    I ITNA  YI Y  LK D+SPGCS KHP LC   E N YQRGCSAI+RCR   + ID +EK        ID+ E+D    + +
Subjt:  KGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEK--------IDEKENDT---YGK

Query:  EKRIKTDDKK--------DIVDGEIEKIHNDDAGNGVIGSEEKSVETNTLKINITN
           IK DDK+        D ++ + EK     AG+ +  SEEK    N LK+++ N
Subjt:  EKRIKTDDKK--------DIVDGEIEKIHNDDAGNGVIGSEEKSVETNTLKINITN

A0A6J1DYH7 uncharacterized protein LOC1110257777.5e-2451.47Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTY---GKEKRI
        MAI KGS  IFVGIL  C+  I ITNA  +I Y PL+GD+SPGCS  HPELC     NPY+RGC++IDRCRGGS++ID  E I E + +      K K +
Subjt:  MAIIKGSTLIFVGILFVCIDTIAITNA-NYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTY---GKEKRI

Query:  KTDDKKDIVDGEIEKIHNDDAGNGVIGSEEKSVETN
        K+D K D++ G  EKI   DA N V  S+EK + ++
Subjt:  KTDDKKDIVDGEIEKIHNDDAGNGVIGSEEKSVETN

A0A6J1FQ53 auxin-induced in root cultures protein 12-like4.4e-1642.42Show/hide
Query:  MAIIKGSTLIFVGILFVCIDTIAIT--NANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDEKENDTYGKEKRIK
        MAI   + L+  G LF+CID + IT  NAN I+Y  ++ D+SPGC+ KHP LC   + NPY+RGC+AI++CRG  S V++  EKID K ND    E +  
Subjt:  MAIIKGSTLIFVGILFVCIDTIAIT--NANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG-SNVIDGDEKIDEKENDTYGKEKRIK

Query:  TDD---KKDIVDGEIEKIHN---DDAGNGVIG
        TD+   K   V     KI+    ++  +G++G
Subjt:  TDD---KKDIVDGEIEKIHN---DDAGNGVIG

A0A6J1JNY3 auxin-induced in root cultures protein 12-like5.9e-1346.32Show/hide
Query:  ITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH
        IT  N+I Y  +K D+SPGCS KHP LC   E N YQRGC+AI++CR G ++I+  EKID K +D    E +  TD+     K+ +V G   KI+
Subjt:  ITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTYGKEKRIKTDD-----KKDIVDGEIEKIH

SwissProt top hitse value%identityAlignment
A8MQM2 Protein RALF-like 66.8e-0647.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C ++    Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

A8MQM7 Protein RALF-like 153.4e-0539.66Show/hide
Query:  ILFVCIDTIAITNANYIEY-GPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        ILF+ +    +    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIAITNANYIEY-GPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

F4ISE1 Protein RALF-like 122.2e-0440Show/hide
Query:  VGILFVCIDTIA--ITNANYIEYGPLK----GDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        +G+L +C   IA  + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTIA--ITNANYIEYGPLK----GDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

Q3ECL0 Protein RALF-like 93.6e-0740Show/hide
Query:  ILFVCIDTIAITNANYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG
        ++F+ +    +    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIAITNANYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG

Arabidopsis top hitse value%identityAlignment
AT1G60625.1 RALF-like 64.8e-0747.62Show/hide
Query:  YIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        YI Y  +KGDI PGCS+K+P+ C ++    Y RGC    RC+
Subjt:  YIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

AT1G61566.1 ralf-like 92.5e-0840Show/hide
Query:  ILFVCIDTIAITNANYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG
        ++F+ +    +    YI Y  + +GD +  C   HP  C + E NPYQRGC  I+RCRGG
Subjt:  ILFVCIDTIAITNANYIEYGPL-KGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGG

AT2G19040.1 RALF-like 121.5e-0540Show/hide
Query:  VGILFVCIDTIA--ITNANYIEYGPLK----GDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        +G+L +C   IA  + + NYIEYG +      +  PGC+    E      VN Y RGCS I RCR
Subjt:  VGILFVCIDTIA--ITNANYIEYGPLK----GDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

AT2G22055.1 RALF-like 152.4e-0639.66Show/hide
Query:  ILFVCIDTIAITNANYIEY-GPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR
        ILF+ +    +    YI Y G   GD +  C   HP  C +   NPY+RGC  I+RCR
Subjt:  ILFVCIDTIAITNANYIEY-GPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCR

AT2G32835.1 RALF-like 167.7e-0530.77Show/hide
Query:  IFVGILFVCIDTIAITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKEN
        +F  ++ V         A  + YG +KGD  P C  K+P  C +  VN Y RGC  I RC   +        +D+ E+
Subjt:  IFVGILFVCIDTIAITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCATCAAAGGAAGCACGCTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGCGATTACAAATGCAAATTACATCGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACTTGAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGAGAAAGAGAATGATACATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
AAGATTCATAACGACGATGCAGGAAATGGTGTTATAGGCAGTGAAGAAAAGAGTGTTGAAACTAATACACTCAAGATTAACATCACAAATGTTAACATCCCAAAAAAAAA
GGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCATCAAAGGAAGCACGCTTATTTTTGTTGGCATTCTCTTTGTTTGTATTGACACGATTGCGATTACAAATGCAAATTACATCGAGTATGGTCCTCTAAAAGG
TGATATTAGTCCTGGATGTAGCGCTAAACATCCTGAACTTTGTGGAAGACTTGAAGTAAACCCATATCAAAGAGGTTGTAGTGCAATCGACCGTTGCAGAGGAGGATCTA
ATGTCATAGATGGTGATGAAAAAATAGACGAGAAAGAGAATGATACATATGGTAAAGAAAAGAGGATCAAGACCGATGACAAAAAAGATATTGTGGATGGTGAAATAGAA
AAGATTCATAACGACGATGCAGGAAATGGTGTTATAGGCAGTGAAGAAAAGAGTGTTGAAACTAATACACTCAAGATTAACATCACAAATGTTAACATCCCAAAAAAAAA
GGATTAA
Protein sequenceShow/hide protein sequence
MAIIKGSTLIFVGILFVCIDTIAITNANYIEYGPLKGDISPGCSAKHPELCGRLEVNPYQRGCSAIDRCRGGSNVIDGDEKIDEKENDTYGKEKRIKTDDKKDIVDGEIE
KIHNDDAGNGVIGSEEKSVETNTLKINITNVNIPKKKD