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Tan0012733 (gene) of Snake gourd v1 genome

Gene IDTan0012733
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDefensin-like protein
Genome locationLG08:11041045..11041425
RNA-Seq ExpressionTan0012733
SyntenyTan0012733
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR039641 - Low-molecular-weight cysteine-rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031758.1 defensin-like protein 182 [Cucumis melo var. makuwa]5.1e-3660.91Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+++C EGLG CG++CD RCKA+H+P +NPQGSCD++G N  LC CLY CG   P+P   + C  GLGLC+ +C  DCCNAKC   + GG+GYCDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        V LCQCS+PC
Subjt:  VSLCQCSYPC

KAE8651676.1 hypothetical protein Csa_021158 [Cucumis sativus]7.9e-3761.82Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+D+C EGLG CG++CD RCKA+H+P +NPQGSCD++G+++ LC CLY C  S P P     C  GLGLC+A+C  DCCNAKC   + GG+G+CDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        VSLCQCS+PC
Subjt:  VSLCQCSYPC

KAG6586037.1 putative defensin-like protein 180, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4375.47Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        DLC EGLG CGSDCD+RCKARH PA+NPQG C+R+GN  LCECLY C   R  PP  KVC DGLG CSA+CN DCC+AKCAS HNGGQGYCDTNVG+ LC
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QCSYPC
Subjt:  QCSYPC

KAG7020813.1 Defensin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4371.3Show/hide
Query:  DTKLAAGNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYC
        D K    + DLC EGLG CGSDCD+RCKARH PA+NPQG C+R+GN  LCECLY C   R  PP  KVC DGLG CSA+CN DCC+AKCAS HNGGQGYC
Subjt:  DTKLAAGNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYC

Query:  DTNVGVSLCQCSYPC
        DTNVG+ LCQCSYPC
Subjt:  DTNVGVSLCQCSYPC

XP_004148336.2 defensin-like protein 182 [Cucumis sativus]7.9e-3761.82Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+D+C EGLG CG++CD RCKA+H+P +NPQGSCD++G+++ LC CLY C  S P P     C  GLGLC+A+C  DCCNAKC   + GG+G+CDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        VSLCQCS+PC
Subjt:  VSLCQCSYPC

TrEMBL top hitse value%identityAlignment
A0A059CR65 Defensin-like protein1.6e-2250Show/hide
Query:  CREGLGLC--GSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        C EG+GLC  G++C++RC A H P    +GSCD      LC C YDC    P PP+ KVC  GLGLCS  C+  CC+ +CA+  + G+GYCD + G  LC
Subjt:  CREGLGLC--GSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

A0A0A0LMG4 Defensin-like protein3.8e-3761.82Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+D+C EGLG CG++CD RCKA+H+P +NPQGSCD++G+++ LC CLY C  S P P     C  GLGLC+A+C  DCCNAKC   + GG+G+CDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAM-LCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        VSLCQCS+PC
Subjt:  VSLCQCSYPC

A0A5A7SMA4 Defensin-like protein2.5e-3660.91Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+++C EGLG CG++CD RCKA+H+P +NPQGSCD++G N  LC CLY CG   P+P   + C  GLGLC+ +C  DCCNAKC   + GG+GYCDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        V LCQCS+PC
Subjt:  VSLCQCSYPC

A0A5D3CNI5 Defensin-like protein8.0e-3559.09Show/hide
Query:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG
        GN+++C EGLG CG++CD RCKA+H+P +NPQG CD++G N  LC CLY CG    +P   + C  GLGLC+ +C  DCCNAKC S + GG+GYCDTNVG
Subjt:  GNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVG-NAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVG

Query:  VSLCQCSYPC
        V LCQC++PC
Subjt:  VSLCQCSYPC

D7MC90 Defensin-like protein6.4e-2450.94Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        D C +GLGLC + CD+RCKA+H P+   + +CDR     LC C Y CG   P PP  K C+ G G+CS RC G CC+  CA  +NGG G+C+T    SLC
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

SwissProt top hitse value%identityAlignment
P82733 Defensin-like protein 1833.0e-2348.15Show/hide
Query:  NRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVS
        N + C EG+G C   CD RCKARH PA   +G+CD      LC C Y C G  P PP+ K C+ G G+CS RC   CCN  CA  +N G G+CD+    S
Subjt:  NRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVS

Query:  LCQCSYPC
        LC+C Y C
Subjt:  LCQCSYPC

P82772 Putative defensin-like protein 1801.3e-2143.4Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        D C E LGLC   CD+RC+A+H P  +    CD     + C C Y+CG   P PP+  VC  G G+CS +C   CC+  CA  +NGG+G+C++    + C
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

P82773 Defensin-like protein 1828.0e-2446.23Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        D C +GLG C ++CD+RCKA+H P+   + SCDR     LC+C Y+C      P   K C  G G+CS RC G CC+  CA  + GG G+C+T    S C
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

P82789 Defensin-like protein 1814.8e-2144.76Show/hide
Query:  LCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLCQ
        +C + LGLC   CD+RCKA+H P  + +  CD     +LC C Y+CG +       K+C+ GLG C   CN  CC+  CA  +NGG GYC+T    SLC 
Subjt:  LCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLCQ

Query:  CSYPC
        C YPC
Subjt:  CSYPC

Arabidopsis top hitse value%identityAlignment
AT4G30070.1 low-molecular-weight cysteine-rich 595.7e-2546.23Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        D C +GLG C ++CD+RCKA+H P+   + SCDR     LC+C Y+C      P   K C  G G+CS RC G CC+  CA  + GG G+C+T    S C
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

AT4G30074.1 low-molecular-weight cysteine-rich 192.2e-2448.15Show/hide
Query:  NRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVS
        N + C EG+G C   CD RCKARH PA   +G+CD      LC C Y C G  P PP+ K C+ G G+CS RC   CCN  CA  +N G G+CD+    S
Subjt:  NRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVS

Query:  LCQCSYPC
        LC+C Y C
Subjt:  LCQCSYPC

AT5G38317.1 low-molecular-weight cysteine-rich 589.1e-2343.4Show/hide
Query:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC
        D C E LGLC   CD+RC+A+H P  +    CD     + C C Y+CG   P PP+  VC  G G+CS +C   CC+  CA  +NGG+G+C++    + C
Subjt:  DLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLC

Query:  QCSYPC
        QC YPC
Subjt:  QCSYPC

AT5G38330.1 low-molecular-weight cysteine-rich 803.4e-2244.76Show/hide
Query:  LCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLCQ
        +C + LGLC   CD+RCKA+H P  + +  CD     +LC C Y+CG +       K+C+ GLG C   CN  CC+  CA  +NGG GYC+T    SLC 
Subjt:  LCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLCQ

Query:  CSYPC
        C YPC
Subjt:  CSYPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTTTAAATTTCATCGTGACGAGACAGACACGAAGCTTGCAGCGGGGAATAGGGACTTATGTCGGGAAGGGCTAGGGCTGTGTGGAAGCGACTGCGACAAGAG
GTGCAAAGCAAGGCACAACCCAGCAGACAACCCGCAGGGCAGCTGCGACCGCGTCGGGAATGCGATGCTGTGTGAATGCCTTTACGATTGCGGCGGATCTCGGCCGAGGC
CGCCGCGTGCAAAGGTGTGCCATGATGGGCTAGGGCTGTGCAGCGCCCGGTGCAACGGCGATTGCTGTAATGCTAAATGTGCAAGCCTGCACAATGGAGGCCAGGGCTAC
TGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGCAGCTATCCTTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTTTAAATTTCATCGTGACGAGACAGACACGAAGCTTGCAGCGGGGAATAGGGACTTATGTCGGGAAGGGCTAGGGCTGTGTGGAAGCGACTGCGACAAGAG
GTGCAAAGCAAGGCACAACCCAGCAGACAACCCGCAGGGCAGCTGCGACCGCGTCGGGAATGCGATGCTGTGTGAATGCCTTTACGATTGCGGCGGATCTCGGCCGAGGC
CGCCGCGTGCAAAGGTGTGCCATGATGGGCTAGGGCTGTGCAGCGCCCGGTGCAACGGCGATTGCTGTAATGCTAAATGTGCAAGCCTGCACAATGGAGGCCAGGGCTAC
TGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGCAGCTATCCTTGCTAA
Protein sequenceShow/hide protein sequence
MSSFKFHRDETDTKLAAGNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGY
CDTNVGVSLCQCSYPC