; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012739 (gene) of Snake gourd v1 genome

Gene IDTan0012739
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEukaryotic translation initiation factor 3 subunit J
Genome locationLG11:12692564..12698881
RNA-Seq ExpressionTan0012739
SyntenyTan0012739
Gene Ontology termsGO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0005852 - eukaryotic translation initiation factor 3 complex (cellular component)
GO:0016282 - eukaryotic 43S preinitiation complex (cellular component)
GO:0033290 - eukaryotic 48S preinitiation complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsIPR013906 - Eukaryotic translation initiation factor 3 subunit J
IPR023194 - Eukaryotic translation initiation factor 3-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939210.1 eukaryotic translation initiation factor 3 subunit J-like [Cucurbita moschata]3.9e-9588.84Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENIPPLQKEQPKNKWDDEDVDD+ VKESWEDEDE AP    PVVK PPE APKKPAAKTTEKK KT  VEP+Q LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ
        ST ELF KRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDA+RLSMTSLKAADAKEVASSVTALANEKLKAEKE   GKKKTAVKKKQ
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ

Query:  LHVEKADDDMVVNSYDDVDDYDFM
        LHVEKADDDM+ N+YD +DDYDFM
Subjt:  LHVEKADDDMVVNSYDDVDDYDFM

XP_022963973.1 eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita moschata]6.0e-9689.19Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENI PLQKEQPKNKWDDEDVDDD VKESWED+DE AP   APVVK PPEAA KKPAAKT EKKGKTA VEPEQ LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH
        ST +LFKK GDEKTLDNFIPKS+SDFLEYAELISHKLRPYEKSFHYINLLKD IRLSMTSLKAADAKEVASSVTALANEKLKAEK+T KKKTAVKKKQLH
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH

Query:  VEKADDDMVVNSYDDVDDYDFM
        VEKA DDM+VNS+DD+D+YDFM
Subjt:  VEKADDDMVVNSYDDVDDYDFM

XP_022991178.1 eukaryotic translation initiation factor 3 subunit J-like isoform X1 [Cucurbita maxima]3.0e-9588.29Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENI PLQKEQPKNKWDDEDVDDD VKESWED+DE AP   APVVK PPEAA KKPAAKT EKKGKT+ VEPEQ LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH
        ST +LFKK GDEKTLDNFIPKS+SDFLEYAELISHKLRPYEKSFHYINLLKD IRLSMTSLKAADAKEVASSVTALANE+LKAEK+T KKKTAVKKKQLH
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH

Query:  VEKADDDMVVNSYDDVDDYDFM
        VEKA DDM+VNS+DD+D+YDFM
Subjt:  VEKADDDMVVNSYDDVDDYDFM

XP_022993373.1 eukaryotic translation initiation factor 3 subunit J-like [Cucurbita maxima]1.7e-9588.84Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENIPPLQKEQPKNKWDDEDVDD+ VKESWEDEDE AP    PVVK PPE APKKPAAKTTEKK KT  VEP+Q LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ
        ST ELF KRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDA+RLSMTSLKAADAKEVASSVTALANEKLKAEKE   GKKKTAVKKKQ
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ

Query:  LHVEKADDDMVVNSYDDVDDYDFM
        LHVEKADDDM+ N+YD +DDYDFM
Subjt:  LHVEKADDDMVVNSYDDVDDYDFM

XP_023551688.1 eukaryotic translation initiation factor 3 subunit J-like [Cucurbita pepo subsp. pepo]7.0e-9789.64Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENI PLQKEQPKNKWDDEDVDDD VKESWED+DE AP   APVVK PPEAAPKKPAAKT EKKGKTA VEPEQ LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH
        ST +LFKK GDEKTLDNFIPKS+SDFLEYAELISHKLRPYEKSFHYINLLKD IRLSMTSLKAADAKEVASSVTALANEKLKAEK+T KKKTAVKKKQLH
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH

Query:  VEKADDDMVVNSYDDVDDYDFM
        VEKA DDM+VNS+DD+D+YDFM
Subjt:  VEKADDDMVVNSYDDVDDYDFM

TrEMBL top hitse value%identityAlignment
A0A6J1CJU9 Eukaryotic translation initiation factor 3 subunit J4.2e-9587.95Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENIPPLQKEQPKNKWDDEDVDD+ VKESWEDEDE  P   APVVK PPEA PKKPAAKTTEKKGK   V P+Q LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ
        ST ELFKKRGDEKTL+NFIPKSESDFLEYAEL+SHKL PYEKSFHYINLLKD IRLSM SLKAADAK+VASSVTALANEKLKAEKE   GKKKTAVKKKQ
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ

Query:  LHVEKADDDMVVNSYDDVDDYDFM
        LHVEKADDD+VVNSYDD+DDYDFM
Subjt:  LHVEKADDDMVVNSYDDVDDYDFM

A0A6J1FM17 Eukaryotic translation initiation factor 3 subunit J1.9e-9588.84Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENIPPLQKEQPKNKWDDEDVDD+ VKESWEDEDE AP    PVVK PPE APKKPAAKTTEKK KT  VEP+Q LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ
        ST ELF KRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDA+RLSMTSLKAADAKEVASSVTALANEKLKAEKE   GKKKTAVKKKQ
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ

Query:  LHVEKADDDMVVNSYDDVDDYDFM
        LHVEKADDDM+ N+YD +DDYDFM
Subjt:  LHVEKADDDMVVNSYDDVDDYDFM

A0A6J1HJG3 Eukaryotic translation initiation factor 3 subunit J2.9e-9689.19Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENI PLQKEQPKNKWDDEDVDDD VKESWED+DE AP   APVVK PPEAA KKPAAKT EKKGKTA VEPEQ LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH
        ST +LFKK GDEKTLDNFIPKS+SDFLEYAELISHKLRPYEKSFHYINLLKD IRLSMTSLKAADAKEVASSVTALANEKLKAEK+T KKKTAVKKKQLH
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH

Query:  VEKADDDMVVNSYDDVDDYDFM
        VEKA DDM+VNS+DD+D+YDFM
Subjt:  VEKADDDMVVNSYDDVDDYDFM

A0A6J1JVF0 Eukaryotic translation initiation factor 3 subunit J1.4e-9588.29Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENI PLQKEQPKNKWDDEDVDDD VKESWED+DE AP   APVVK PPEAA KKPAAKT EKKGKT+ VEPEQ LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH
        ST +LFKK GDEKTLDNFIPKS+SDFLEYAELISHKLRPYEKSFHYINLLKD IRLSMTSLKAADAKEVASSVTALANE+LKAEK+T KKKTAVKKKQLH
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLH

Query:  VEKADDDMVVNSYDDVDDYDFM
        VEKA DDM+VNS+DD+D+YDFM
Subjt:  VEKADDDMVVNSYDDVDDYDFM

A0A6J1K212 Eukaryotic translation initiation factor 3 subunit J8.4e-9688.84Show/hide
Query:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK
        MDDWEDENIPPLQKEQPKNKWDDEDVDD+ VKESWEDEDE AP    PVVK PPE APKKPAAKTTEKK KT  VEP+Q LDPLAEKLRQQRLVEEADYK
Subjt:  MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYK

Query:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ
        ST ELF KRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDA+RLSMTSLKAADAKEVASSVTALANEKLKAEKE   GKKKTAVKKKQ
Subjt:  STAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTAVKKKQ

Query:  LHVEKADDDMVVNSYDDVDDYDFM
        LHVEKADDDM+ N+YD +DDYDFM
Subjt:  LHVEKADDDMVVNSYDDVDDYDFM

SwissProt top hitse value%identityAlignment
A7RSH7 Eukaryotic translation initiation factor 3 subunit J2.3e-1333.2Show/hide
Query:  MDDWEDENIPP--LQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAA-----------KTTEKKGKTAG----VEPEQSLDP
        M DW+DE   P  +  +   +KW+ ED DDD +KESW+D+DE     +    K+   AAPKK              K  E+K K        E ++ L P
Subjt:  MDDWEDENIPP--LQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAA-----------KTTEKKGKTAG----VEPEQSLDP

Query:  ---LAEKLRQQRLVEEADYKSTAELF----KKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTAL
           +AEKLR+Q++VEE+D     + F    ++      LD+ IP ++ +F EY++L+  KL  +E +  YI  L+  +R    SL   D K+++S++  L
Subjt:  ---LAEKLRQQRLVEEADYKSTAELF----KKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTAL

Query:  ANEKLKAEKETGKKKTAVKKKQL--HVEKADDDMVVNSYDDV-DDYD
         +EKLKA+K    K  A KK  L    +    D +  SY D+ ++YD
Subjt:  ANEKLKAEKETGKKKTAVKKKQL--HVEKADDDMVVNSYDDV-DDYD

B4J4E7 Eukaryotic translation initiation factor 3 subunit J3.7e-1634.76Show/hide
Query:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKP------AAKTTEKKGKTAGVEPEQSLDPLAEKLRQQ
        DDWE     + +         NKW+ ED DD+ VKESWEDE+E     +    ++P +  P K         +  EK+ +   +    + + LAEKLR Q
Subjt:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKP------AAKTTEKKGKTAGVEPEQSLDPLAEKLRQQ

Query:  RLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKK
        ++ EE+D KS  E F     +  LD+F P+S  +F E+   +S K+  Y++S H+   ++D ++    +L  AD K+V  SV  L +EKLK EK + K K
Subjt:  RLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKK

Query:  TAVK---KKQLHVEKADDDMVVNSYDD-VDDYD
         A K   K  L  E  D D+     DD  DDYD
Subjt:  TAVK---KKQLHVEKADDDMVVNSYDD-VDDYD

B4KTH6 Eukaryotic translation initiation factor 3 subunit J4.4e-1736.71Show/hide
Query:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDE----DEVAPASQAPVVKSPPEAAPK-----KPAAKTTEKKGKTAGVEPEQSLDPLAEKL
        DDWE     E +         NKW+ ED DD+ VKESWEDE    DE  P      VK+ P  A K     +   K  E++ + A + PE+    LAEKL
Subjt:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDE----DEVAPASQAPVVKSPPEAAPK-----KPAAKTTEKKGKTAGVEPEQSLDPLAEKL

Query:  RQQRLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETG
        R Q++ EE+D KS  E F        LD F P+S+ +F E+   +S K+  Y +S H+   ++D +R    +L AAD K+V  SV +L +EKLK EK   
Subjt:  RQQRLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETG

Query:  KKKTAVKKKQLHVEKADDDMVVNSY-----DDVDDYD
        KK     K ++ +   +DD  ++ Y     D  DDYD
Subjt:  KKKTAVKKKQLHVEKADDDMVVNSY-----DDVDDYD

B4LN42 Eukaryotic translation initiation factor 3 subunit J9.8e-1734.62Show/hide
Query:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSL------DPLAEKLRQQ
        DDWE     E +         NKW+ ED DD+ VKESWEDE+E     +    ++P +  P K      E++ +    E  + L      + LAEKLR Q
Subjt:  DDWE----DENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSL------DPLAEKLRQQ

Query:  RLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKK
        ++ EE+D KS  + F        LD F P+S+ +F E+   +S K+  Y +S H+   ++D +R    +L AAD K+V  SV +L +EK K EK   KK 
Subjt:  RLVEEADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKK

Query:  TAVKKKQLHVEKADDDMVVNSY-----DDVDDYD
         A  K ++ + K  DD  ++ Y     D  DDYD
Subjt:  TAVKKKQLHVEKADDDMVVNSY-----DDVDDYD

Q0ZB73 Eukaryotic translation initiation factor 3 subunit J1.0e-1331.06Show/hide
Query:  WEDENIPPLQKE--QPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKP-----AAKTTEKKGKTAGVEPEQSLD------PLAEKLRQ
        W+ +N  P         NKW+ ED +DD VKESWEDE+E     +      PP+  PKK      A +  +++ K   +  E++ +       LAEKLRQ
Subjt:  WEDENIPPLQKE--QPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKP-----AAKTTEKKGKTAGVEPEQSLD------PLAEKLRQ

Query:  QRLVEEADYKSTAELF-KKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGK
        Q+L EE+D +   E F    G+   LDNF P ++ ++ E+A+L++ K+  Y+    +   + D ++  +  + +AD + +  +V  L  EK KAEK    
Subjt:  QRLVEEADYKSTAELF-KKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGK

Query:  KKTAVKKKQLHVEKADDDMVVNSYDDV----DDYD
        KK    K +  ++   D+  +N Y+      DDYD
Subjt:  KKTAVKKKQLHVEKADDDMVVNSYDDV----DDYD

Arabidopsis top hitse value%identityAlignment
AT1G66070.1 Translation initiation factor eIF3 subunit2.6e-6563.32Show/hide
Query:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGV----EPEQSLDPLAEKLRQQRLVE
        MDDWEDE I PL  K + K+ WDDEDVD++ +K+SWED+D+    +Q PV+   PE APKK A KT EKKGK   V      E+ LDP+AEKLRQQRLVE
Subjt:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGV----EPEQSLDPLAEKLRQQRLVE

Query:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA
        EADY++TAELF  + D+K LD FIPKSESDFLEYAE+ISH+++PYEKS+HYI LLK  +RLS+T++KAAD K+VASS+T +ANEKLKAEKE   GKKK  
Subjt:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA

Query:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM
         KKKQL V+KA+DD+V   YD +DD+DFM
Subjt:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM

AT1G66070.2 Translation initiation factor eIF3 subunit2.6e-6563.32Show/hide
Query:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGV----EPEQSLDPLAEKLRQQRLVE
        MDDWEDE I PL  K + K+ WDDEDVD++ +K+SWED+D+    +Q PV+   PE APKK A KT EKKGK   V      E+ LDP+AEKLRQQRLVE
Subjt:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGV----EPEQSLDPLAEKLRQQRLVE

Query:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA
        EADY++TAELF  + D+K LD FIPKSESDFLEYAE+ISH+++PYEKS+HYI LLK  +RLS+T++KAAD K+VASS+T +ANEKLKAEKE   GKKK  
Subjt:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA

Query:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM
         KKKQL V+KA+DD+V   YD +DD+DFM
Subjt:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM

AT5G37475.1 Translation initiation factor eIF3 subunit6.0e-6262.45Show/hide
Query:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTA----GVEPEQSLDPLAEKLRQQRLVE
        MDDWE E+  PL  K + K+ WDDEDVD++ +K+SWE+ED  AP    P+VK   E APKKPA K  EKK KT     G   E+ LDP+AEKLR QRLVE
Subjt:  MDDWEDENIPPL-QKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTA----GVEPEQSLDPLAEKLRQQRLVE

Query:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA
        EADY+STAELF  + +EK++D  IPKSESDFL+YAELIS +L P+EKSFHYI LLK  +RLS+ ++KAAD K+VASS+TA+ANEKLKAEKE   GKKK+ 
Subjt:  EADYKSTAELFKKRGDEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKE--TGKKKTA

Query:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM
         KKKQLHV+K DDD+V   YD +DD DFM
Subjt:  VKKKQLHVEKADDDMVVNSYDDVDDYDFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACTGGGAGGATGAGAACATTCCACCACTCCAGAAGGAGCAGCCAAAGAATAAATGGGATGATGAGGATGTGGATGACGATGCTGTGAAGGAATCTTGGGAGGA
TGAAGATGAAGTTGCACCGGCATCACAGGCTCCAGTAGTTAAATCTCCTCCTGAAGCCGCCCCAAAGAAACCGGCTGCAAAAACTACTGAAAAGAAAGGGAAAACTGCTG
GGGTAGAACCTGAACAGTCTCTAGATCCATTAGCTGAGAAACTTCGCCAGCAAAGGTTAGTGGAAGAAGCAGATTACAAGTCCACTGCCGAATTGTTTAAAAAGAGAGGT
GATGAGAAGACTCTTGACAATTTCATTCCGAAATCTGAGAGTGACTTCTTGGAATATGCCGAGCTGATCTCTCATAAACTTCGCCCCTATGAGAAAAGTTTCCATTATAT
TAATCTGCTCAAAGATGCCATTAGACTGTCGATGACTTCTTTGAAAGCAGCAGATGCGAAAGAAGTTGCCTCTTCGGTCACTGCACTTGCAAATGAAAAACTAAAGGCGG
AGAAGGAAACCGGTAAAAAGAAGACGGCTGTGAAGAAGAAGCAGCTCCATGTCGAAAAGGCAGATGATGACATGGTTGTCAATTCGTATGATGATGTCGATGACTACGAT
TTCATGTAA
mRNA sequenceShow/hide mRNA sequence
GCCAGTTGGGCCGATTCGGTGGCCAACTCAAAGGCCGTCATTTGACAGCTTACGTTACCACCTAATTCTTCCCATTCACAAAGCGTCGTATGATGCGACAACAATAACAA
ACCCAATCGCTCGAAGATTCTCGCCCTCTTTCTCTCTCACACACGTTCCATTGAAGCCCTAGCTCCGACTTCCCCACGCGCGCCATTAGAGAACCTTCCAGATTCTCCTC
TCTCTCGCTCTATTTTTCAATTCTTCAATTCTGATACAAGTTGTTCTAGGGTTTATCTGCCCATTCCTTATCATCTTGGCTGTCAACAGTCAATTCCTCGTAGAGAGAGT
ATCTTTTTCGGTTGCTTTACTGCTTCCGTTTCCTTACGCCTGCCCTAAACAATCTCTAGAGCGTCCACCGGCCTCCGGACGCTTGCAGGGTTGGACTGCACAGTGTTCAA
TTTCTGGTGTTTTCTGAGTAAACAGTGATACAAGTCAATGGATGACTGGGAGGATGAGAACATTCCACCACTCCAGAAGGAGCAGCCAAAGAATAAATGGGATGATGAGG
ATGTGGATGACGATGCTGTGAAGGAATCTTGGGAGGATGAAGATGAAGTTGCACCGGCATCACAGGCTCCAGTAGTTAAATCTCCTCCTGAAGCCGCCCCAAAGAAACCG
GCTGCAAAAACTACTGAAAAGAAAGGGAAAACTGCTGGGGTAGAACCTGAACAGTCTCTAGATCCATTAGCTGAGAAACTTCGCCAGCAAAGGTTAGTGGAAGAAGCAGA
TTACAAGTCCACTGCCGAATTGTTTAAAAAGAGAGGTGATGAGAAGACTCTTGACAATTTCATTCCGAAATCTGAGAGTGACTTCTTGGAATATGCCGAGCTGATCTCTC
ATAAACTTCGCCCCTATGAGAAAAGTTTCCATTATATTAATCTGCTCAAAGATGCCATTAGACTGTCGATGACTTCTTTGAAAGCAGCAGATGCGAAAGAAGTTGCCTCT
TCGGTCACTGCACTTGCAAATGAAAAACTAAAGGCGGAGAAGGAAACCGGTAAAAAGAAGACGGCTGTGAAGAAGAAGCAGCTCCATGTCGAAAAGGCAGATGATGACAT
GGTTGTCAATTCGTATGATGATGTCGATGACTACGATTTCATGTAATTGTTCTAGTTCTGCATTCCAGCTTGAGTGTCATCAGTTTTTGACCTGCGAAATGGAGGTCATA
TTCTTCGGCGTCTCTCTCCCCTTTTCAATACACCAATAGATTGATTCCTGAGTGTCGTGTCTAAATAAGGTTCATGTATTAGACTTGTGTATGGCATATCATTATAAATT
TTGCTCTTTTATTTAATTTTTTTTTCGATAGAGATGGTTTGAGTCGCCTTTGAGAATGTACAAGAATGCGTGGTCAGTTCAACTCAGATTGTCAAATTTTGTGTATGACG
ATGCTTCCTTTTACCTAAATTACATTTTCTTTGCCCAAA
Protein sequenceShow/hide protein sequence
MDDWEDENIPPLQKEQPKNKWDDEDVDDDAVKESWEDEDEVAPASQAPVVKSPPEAAPKKPAAKTTEKKGKTAGVEPEQSLDPLAEKLRQQRLVEEADYKSTAELFKKRG
DEKTLDNFIPKSESDFLEYAELISHKLRPYEKSFHYINLLKDAIRLSMTSLKAADAKEVASSVTALANEKLKAEKETGKKKTAVKKKQLHVEKADDDMVVNSYDDVDDYD
FM