; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012757 (gene) of Snake gourd v1 genome

Gene IDTan0012757
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribonuclease P protein subunit p38
Genome locationLG11:15993993..15997868
RNA-Seq ExpressionTan0012757
SyntenyTan0012757
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579150.1 hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia]2.3e-7993.45Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQFA+GVNEVTRVLERMTPS DS  I+NPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_022938626.1 ribonuclease P protein subunit p38 [Cucurbita moschata]2.7e-8094.05Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQFA+GVNEVTRVLERMTPSGDS  I+NPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_022993803.1 ribonuclease P protein subunit p38 [Cucurbita maxima]3.1e-7691.67Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNA+SLPEKIWLKKQFA+GVNEVTRVLERMTPS DS   MNPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLIGEIL RT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_023549838.1 ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo]6.8e-7992.26Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAE+LPEKIWLKKQFA+GVNEVTRVLERMTPS DS  I+NPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSP+NQLIGEILQRT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

XP_038875290.1 ribonuclease P protein subunit p38 [Benincasa hispida]1.0e-7489.22Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSS   AV+QSK +EDSYEGERLDE LQSIQREIK  R LNAESLPEKIWLKKQFA+GVNEVTRVLERMTPSGDS  IMNPNYKACTVKLQA+LL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQR
        TA+CNPRWLTNHVP+LA+SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLI EILQR
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQR

TrEMBL top hitse value%identityAlignment
A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X55.2e-6984.12Show/hide
Query:  MGKKAKSSGY-VAVVQSKRSED-SYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAI
        MGK  KSS + VA +QSK  ED SYEGERLDELL SIQREIK  R LNAESLPEK WLKKQFA+GVNEVTR LERMTP GDS  +MNPNYKAC VKLQAI
Subjt:  MGKKAKSSGY-VAVVQSKRSED-SYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAI

Query:  LLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        LLTA+CNPRWLTNHVP LA+SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLI EILQRT
Subjt:  LLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X62.1e-7084.62Show/hide
Query:  MGKKAKSSGY-VAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAIL
        MGK  KSS + VA +QSK  EDSYEGERLDELL SIQREIK  R LNAESLPEK WLKKQFA+GVNEVTR LERMTP GDS  +MNPNYKAC VKLQAIL
Subjt:  MGKKAKSSGY-VAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAIL

Query:  LTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        LTA+CNPRWLTNHVP LA+SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLI EILQRT
Subjt:  LTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

A0A6J1CZ90 ribonuclease P protein subunit p381.1e-7182.66Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSS    VV+SK  +D YEG+RLDELLQSIQREIKR R LNAESLP KIWLKKQFAVGVNEVTRVLERMTPSGDS  IMNPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV
          DCNPRWLTNH+P LA+SR VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T S  V
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV

A0A6J1FDN9 ribonuclease P protein subunit p381.3e-8094.05Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQFA+GVNEVTRVLERMTPSGDS  I+NPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

A0A6J1K3C5 ribonuclease P protein subunit p381.5e-7691.67Show/hide
Query:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL
        MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNA+SLPEKIWLKKQFA+GVNEVTRVLERMTPS DS   MNPNYKACTV+LQAILL
Subjt:  MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILL

Query:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
        TADCNPRWLTNHVP+LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLIGEIL RT
Subjt:  TADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT

SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p381.8e-0529.66Show/hide
Query:  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGS
        ++KQ A+GVNEVTR LER                    +L  +L+     P  +T+H+  L++SR VP   V     S R+  ++ LK  +A+  K N +
Subjt:  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGS

Query:  PVNQLIGEILQRTASKNV
             +  I+ R  S +V
Subjt:  PVNQLIGEILQRTASKNV

Q32LC1 Ribonuclease P protein subunit p381.0e-0531.36Show/hide
Query:  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGS
        ++KQ A+G+NEVTR LER                    +L   L      P  +T+H+  L++SR VP   V     S RL  ++ LK  +A+G K N +
Subjt:  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGS

Query:  PVNQLIGEILQRTASKNV
           + +  IL R    NV
Subjt:  PVNQLIGEILQRTASKNV

Q80UU2 Ribonuclease P protein subunit p381.8e-0529.17Show/hide
Query:  IWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKAN
        + ++KQ  +GVNEVTR LER                    +L  +L+     P  +T+H+  L++SR VP   V   + S R+  ++ LK  +A+G + N
Subjt:  IWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKAN

Query:  GSPVNQLIGEILQRTASKNV
               +  I+ R  S NV
Subjt:  GSPVNQLIGEILQRTASKNV

Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.6e-4157.62Show/hide
Query:  RSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLA
        +  D YEGERL  LL  IQR I+ ++  N  SLPEKIWLKKQ A+G+NEVTRVLERM P+  S    NP       +LQ ++L ADC PR LT H+PNLA
Subjt:  RSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLA

Query:  ISRKVPLILVKD-KEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQR
         SR VP++ V+D K  SLRLGELV LKTA+AIGIKA G+ +N L+ +IL R
Subjt:  ISRKVPLILVKD-KEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAGAAGGCCAAATCTTCTGGTTATGTTGCAGTCGTTCAATCCAAGCGTAGCGAAGATTCCTATGAAGGGGAACGTCTCGATGAATTGCTACAGTCGATTCAGAG
GGAGATAAAGAGAACAAGATCTCTGAATGCGGAATCCTTGCCGGAAAAGATTTGGCTTAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACCAGAGTCCTTGAACGGA
TGACGCCAAGTGGAGATTCTCCTCACATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACAGCTGATTGCAACCCTCGATGGTTGACA
AACCATGTGCCAAACTTGGCCATCTCTAGGAAGGTACCATTGATCCTCGTGAAAGATAAAGAGGGATCTTTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGC
AATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAGCATCAAAAAATGTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
GCCATAAGCCGCGGGTGGGCAGCGCTAGTTCGTCCAGTTCCAGAGCGGTGTTTGTTCAATCGGAGAAGGCCACTGCTATTTCTCTCGACACTTGGAAGCTACAGTTCGTA
GCAAGTTTTCGGTCATGGGCAAGAAGGCCAAATCTTCTGGTTATGTTGCAGTCGTTCAATCCAAGCGTAGCGAAGATTCCTATGAAGGGGAACGTCTCGATGAATTGCTA
CAGTCGATTCAGAGGGAGATAAAGAGAACAAGATCTCTGAATGCGGAATCCTTGCCGGAAAAGATTTGGCTTAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACCAG
AGTCCTTGAACGGATGACGCCAAGTGGAGATTCTCCTCACATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACAGCTGATTGCAACC
CTCGATGGTTGACAAACCATGTGCCAAACTTGGCCATCTCTAGGAAGGTACCATTGATCCTCGTGAAAGATAAAGAGGGATCTTTAAGGTTAGGTGAACTCGTTAACCTT
AAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAGCATCAAAAAATGTTTTGTAGGTACAACAAAG
TTGTCTGCTGTACAGTATATATATGATATGAACTAAAAAAAAATTCTTGTCCTCTTCCCTTTAGCAGTTTGAGATTTTCTCTAGTTTTGCTAATCACATGAAATAGATTT
GTGCTGATTCATTCTAGATAATGACCACCACTGTGGTTGGAAAGATAGTTTATTAGATTTCTAGTTGGAAATAGTGTATGAAAATATGGTGTATCCTTATTAAGAATATT
TGCAGAAGCGTGAGAAGCTAGAATAGTTATTCTTATGTAATTCATTGATTATTTGATTGGGAAATTTCTGACCCAATTTTGTGTGCGGTAGATTAAGTCAACTGTTATCG
TGGCTGATGATGTTTATAAATCCATAATAACATGTCTCGATCATGATTAAC
Protein sequenceShow/hide protein sequence
MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLT
NHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNVL