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Tan0012779 (gene) of Snake gourd v1 genome

Gene IDTan0012779
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein indeterminate-domain 2-like
Genome locationLG02:2821697..2826168
RNA-Seq ExpressionTan0012779
SyntenyTan0012779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1828435.1 unnamed protein product [Ananas comosus var. bracteatus]1.3e-0558.18Show/hide
Query:  GGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR
        GGDC VA     D+ VRVRDL Q  PAGPEPA +PARPQP+V A    + E R+R
Subjt:  GGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR

CAD1837763.1 unnamed protein product [Ananas comosus var. bracteatus]2.0e-1156.16Show/hide
Query:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP
        R  GGGD  VA +   D+ VRVRDLQQ  PAGPEPA +           QRT  E RKRVYVCPE +CVHH+P
Subjt:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP

EMS50894.1 Zinc finger protein MAGPIE [Triticum urartu]4.9e-0541.46Show/hide
Query:  KTRPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGA-PQRTSNEVRKRVYV------CPEPSCVHHNP
        + +PG   D  VA      + VRVR ++Q  PAG EPA +P+RPQP+V A  +    +    V V      CPEP+CVHH+P
Subjt:  KTRPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGA-PQRTSNEVRKRVYV------CPEPSCVHHNP

KAF8038748.1 hypothetical protein BT93_B1333 [Corymbia citriodora subsp. variegata]4.8e-1368.42Show/hide
Query:  DQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP
        D+  RVRD+QQ  P GPEPA  PARPQP V A    + E+RKRVYVCPEPSCVHHNP
Subjt:  DQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP

XP_022981927.1 protein indeterminate-domain 2-like [Cucurbita maxima]6.3e-05100Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNP
        QRTSNEVRKRVYVCPEPSCVHHNP
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNP

TrEMBL top hitse value%identityAlignment
A0A453E5P6 Uncharacterized protein1.8e-0553.03Show/hide
Query:  KTRPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGA----PQRTSNEVRKRV
        K+RP  GGD  VA     D+ VRVRDL+Q  PAGPEPA +PARPQP + A    PQR   +   RV
Subjt:  KTRPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGA----PQRTSNEVRKRV

A0A6V7PC77 Uncharacterized protein6.2e-0658.18Show/hide
Query:  GGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR
        GGDC VA     D+ VRVRDL Q  PAGPEPA +PARPQP+V A    + E R+R
Subjt:  GGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR

A0A6V7Q407 Uncharacterized protein9.9e-1256.16Show/hide
Query:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP
        R  GGGD  VA +   D+ VRVRDLQQ  PAGPEPA +           QRT  E RKRVYVCPE +CVHH+P
Subjt:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNP

J3L8F3 Uncharacterized protein1.9e-1050Show/hide
Query:  PGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR-VYVCPEPSCVHHNPT
        PG GGD  VA +   D+ VRV+ +QQ FPAG E A +PAR QP+V A      + ++R VY+CPEP+CVH++P+
Subjt:  PGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKR-VYVCPEPSCVHHNPT

J3M0G5 C2H2-type domain-containing protein8.1e-0631.85Show/hide
Query:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSV----------GAPQRTSNEV----------------------------------
        R G GGD  VA +   D+ VRVR +QQ  PAG EPA +PAR QP+V           AP     EV                                  
Subjt:  RPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSV----------GAPQRTSNEV----------------------------------

Query:  -----------------RKRVYVCPEPSCVHHNPT
                         R+RVY+CPEP+CVHH+P+
Subjt:  -----------------RKRVYVCPEPSCVHHNPT

SwissProt top hitse value%identityAlignment
Q8RWX7 Protein indeterminate-domain 6, chloroplastic2.5e-0466.67Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNP
        Q+++ EVR++VY+CPEPSCVHH+P
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNP

Q9C9X7 Protein indeterminate-domain 145.0e-0575Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNP
        + T+ EVRKRVYVCPEP+C+HHNP
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNP

Q9FFH3 Zinc finger protein NUTCRACKER1.9e-0482.61Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHN
        QRTS EVRKRVYVCPE +CVHH+
Subjt:  QRTSNEVRKRVYVCPEPSCVHHN

Q9ZUL3 Protein indeterminate-domain 5, chloroplastic4.3e-0460Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNPT
        Q+++ EV+++VY+CPEPSCVHH+P+
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNPT

Q9ZWA6 Zinc finger protein MAGPIE3.5e-0688Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNPT
        QRTS EVRKRVYVCPE SCVHH+PT
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNPT

Arabidopsis top hitse value%identityAlignment
AT1G03840.1 C2H2 and C2HC zinc fingers superfamily protein2.5e-0788Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNPT
        QRTS EVRKRVYVCPE SCVHH+PT
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNPT

AT1G03840.2 C2H2 and C2HC zinc fingers superfamily protein2.5e-0788Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNPT
        QRTS EVRKRVYVCPE SCVHH+PT
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNPT

AT1G68130.1 indeterminate(ID)-domain 143.6e-0675Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNP
        + T+ EVRKRVYVCPEP+C+HHNP
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNP

AT1G68130.2 indeterminate(ID)-domain 143.6e-0675Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHNP
        + T+ EVRKRVYVCPEP+C+HHNP
Subjt:  QRTSNEVRKRVYVCPEPSCVHHNP

AT5G44160.1 C2H2-like zinc finger protein1.4e-0582.61Show/hide
Query:  QRTSNEVRKRVYVCPEPSCVHHN
        QRTS EVRKRVYVCPE +CVHH+
Subjt:  QRTSNEVRKRVYVCPEPSCVHHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGATGGCACGAGCAAGACCAGACCCGGCGGCGGAGGTGATTGCTTTGTCGCAAGAGAGTTTACTAGCGACCAACAGGTTCGTGTGCGAGATCTGCAACAAAGGTT
TCCAGCGGGACCAGAACCTGCAACTTCACCGGCGAGGCCACAACCTTCCGTGGGAGCTCCTCAGCGGACCAGTAATGAGGTGCGTAAGCGCGTCTATGTCTGCCCGGAGC
CTTCCTGCGTGCACCATAATCCGACCCTCAGTCGGCCGTCGGATCCCAGAAAACTTGAGAAGTTCTTGCGGATCCGAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTGATGGCACGAGCAAGACCAGACCCGGCGGCGGAGGTGATTGCTTTGTCGCAAGAGAGTTTACTAGCGACCAACAGGTTCGTGTGCGAGATCTGCAACAAAGGTT
TCCAGCGGGACCAGAACCTGCAACTTCACCGGCGAGGCCACAACCTTCCGTGGGAGCTCCTCAGCGGACCAGTAATGAGGTGCGTAAGCGCGTCTATGTCTGCCCGGAGC
CTTCCTGCGTGCACCATAATCCGACCCTCAGTCGGCCGTCGGATCCCAGAAAACTTGAGAAGTTCTTGCGGATCCGAGAATAG
Protein sequenceShow/hide protein sequence
MCDGTSKTRPGGGGDCFVAREFTSDQQVRVRDLQQRFPAGPEPATSPARPQPSVGAPQRTSNEVRKRVYVCPEPSCVHHNPTLSRPSDPRKLEKFLRIRE