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Tan0012800 (gene) of Snake gourd v1 genome

Gene IDTan0012800
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationLG09:38049568..38057613
RNA-Seq ExpressionTan0012800
SyntenyTan0012800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]4.5e-0850.68Show/hide
Query:  NEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +EV++REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]4.3e-1154.76Show/hide
Query:  LVDMAQEGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++ R REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]1.7e-0752.78Show/hide
Query:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I + R+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]3.4e-0854.17Show/hide
Query:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI + R+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]3.4e-0854.17Show/hide
Query:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + NI + R+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein2.2e-0850.68Show/hide
Query:  NEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI
        +EV++REAQQG + RMI  +E L++R+ R E++N AR R+PPP  P    + +DN+ EG  SD L+DDQVTL+
Subjt:  NEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPP--PQQREDDHDNEYEGGSSDQLEDDQVTLI

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.1e-1154.76Show/hide
Query:  LVDMAQEGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA
        + ++  EG  NI++ R REA +GT+ERMIR +E L+ERI RLE QN A  R+PPPP  R  D D EYEG  SD  EDDQ T++A
Subjt:  LVDMAQEGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIA

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699488.2e-0852.78Show/hide
Query:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD
        + + +I + R+REAQQ TMER+IRGIEEL++RI RLE+QN AR+RIP P    +      YEG +SD  ED+
Subjt:  EGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHARRRIPPPPQQREDDHDNEYEGGSSDQLEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAGAATCATTCAAGGTAGACTTGATCAATCTTGCTTGTGGAGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTAT
GGTGAGCTCAAAAGAAGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCACAAGAAGGTGATCTTAACATTA
ACGAAGTCCGAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTGGAGGTTCAAAACCACGCTAGG
AGGAGAATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCAAGTTACATTAATAGCAAATTT
GCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAGAATCATTCAAGGTAGACTTGATCAATCTTGCTTGTGGAGTCCAATTACAAGGTCGAGAGCCAAGAAGCTACAACAAGCTTTAATCACTCATATTCAAGCTAT
GGTGAGCTCAAAAGAAGAGGTTCTAGAAGATAATTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGACATGGCACAAGAAGGTGATCTTAACATTA
ACGAAGTCCGAATGAGGGAGGCACAACAAGGAACCATGGAGAGAATGATTCGTGGAATAGAAGAGTTATCGGAGCGTATACGGAGGTTGGAGGTTCAAAACCACGCTAGG
AGGAGAATTCCACCCCCTCCACAACAACGTGAGGATGACCATGACAACGAATATGAGGGAGGAAGTTCTGATCAACTAGAAGATGACCAAGTTACATTAATAGCAAATTT
GCATGCTAGAGTCATTCAAGTGGTGTTGATCGTACCTCTTGTGGAGTGA
Protein sequenceShow/hide protein sequence
MLRIIQGRLDQSCLWSPITRSRAKKLQQALITHIQAMVSSKEEVLEDNLHARVIQVVLIVPLVDMAQEGDLNINEVRMREAQQGTMERMIRGIEELSERIRRLEVQNHAR
RRIPPPPQQREDDHDNEYEGGSSDQLEDDQVTLIANLHARVIQVVLIVPLVE