; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012843 (gene) of Snake gourd v1 genome

Gene IDTan0012843
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTropomyosin
Genome locationLG05:2999915..3000238
RNA-Seq ExpressionTan0012843
SyntenyTan0012843
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061866.1 tropomyosin [Cucumis melo var. makuwa]8.8e-2984.31Show/hide
Query:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG
        SSKICFCIP HKNGHKADGGSEKSSKSKPSRRKSRRG+KEGKHSS SDSSGNGN+ DA A SA AVA  AVAVTAVTMD  +DDGGSTH HGGEGG GG 
Subjt:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG

Query:  GG
        GG
Subjt:  GG

KAG6570682.1 hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2785.71Show/hide
Query:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDAS-AGSAAAVAAVAVAVTAVTMDDF-EDDGGSTHGHGGEGG
        MESSKICFCIP HKN HK DGGSEKSSKSKPSRRKS  GAKEGKHSSSSDSSGNGNT  AS AGSAAAVA  A+AVTAVTMD   EDDGGSTH HGGEGG
Subjt:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDAS-AGSAAAVAAVAVAVTAVTMDDF-EDDGGSTHGHGGEGG

Query:  GGGGG
        GGGGG
Subjt:  GGGGG

KAG6605437.1 hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2778.3Show/hide
Query:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDA---SAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEG
        MESSKICFCIP HKNG KADGGSEKSSKSKPSRRKSRR AK GKHS SSDSSG+GNT DA   SA +A A  AVA A T V +D  EDDGGS+HGHGGEG
Subjt:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDA---SAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEG

Query:  GGGGGG
        GGGGGG
Subjt:  GGGGGG

KAG7010529.1 hypothetical protein SDJN02_27323, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2886.67Show/hide
Query:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDAS-AGSAAAVAAVAVAVTAVTMDDF-EDDGGSTHGHGGEGG
        MESSKICFCIP HKN HK DGGSEKSSKSKPSRRKS  GAKEGKHSSSSDSSGNGNT DAS AGSAAAVA  A+AVTAVTMD   EDDGGSTH HGGEGG
Subjt:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDAS-AGSAAAVAAVAVAVTAVTMDDF-EDDGGSTHGHGGEGG

Query:  GGGGG
        GGGGG
Subjt:  GGGGG

TYK15390.1 tropomyosin [Cucumis melo var. makuwa]8.8e-2984.31Show/hide
Query:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG
        SSKICFCIP HKNGHKADGGSEKSSKSKPSRRKSRRG+KEGKHSS SDSSGNGN+ DA A SA AVA  AVAVTAVTMD  +DDGGSTH HGGEGG GG 
Subjt:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG

Query:  GG
        GG
Subjt:  GG

TrEMBL top hitse value%identityAlignment
A0A0A0KFD0 Uncharacterized protein8.9e-2781.19Show/hide
Query:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG
        SSKICFCIP HKNGHKADGGSEKSSKSKPSRRKS R +KEGKHSSSSDSSGNGN  +  A SA AVA  AVAVTAVTMD  +DDGGSTH HGGEGG G G
Subjt:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG

Query:  G
        G
Subjt:  G

A0A5A7V5U9 Tropomyosin4.3e-2984.31Show/hide
Query:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG
        SSKICFCIP HKNGHKADGGSEKSSKSKPSRRKSRRG+KEGKHSS SDSSGNGN+ DA A SA AVA  AVAVTAVTMD  +DDGGSTH HGGEGG GG 
Subjt:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG

Query:  GG
        GG
Subjt:  GG

A0A5D3CVK1 Tropomyosin4.3e-2984.31Show/hide
Query:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG
        SSKICFCIP HKNGHKADGGSEKSSKSKPSRRKSRRG+KEGKHSS SDSSGNGN+ DA A SA AVA  AVAVTAVTMD  +DDGGSTH HGGEGG GG 
Subjt:  SSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGG

Query:  GG
        GG
Subjt:  GG

A0A6J1D515 circumsporozoite protein-like1.3e-2577.36Show/hide
Query:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNT---VDASAGSAAAVAAVAV-AVTAVTMDDFEDDGGSTHGHGGE
        MES+KICFCIP HKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSSSSDSSG+GNT     A  GS AAVAAV V   TA TMD  EDDGGS HGHGG 
Subjt:  MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNT---VDASAGSAAAVAAVAV-AVTAVTMDDFEDDGGSTHGHGGE

Query:  GGGGGG
        G GGGG
Subjt:  GGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTTGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCG
CCGTGGTGCAAAAGAAGGTAAGCATTCTTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGTTGATGCAAGTGCAGGCAGTGCCGCAGCCGTGGCTGCTGTTGCGGTTG
CGGTCACGGCGGTGACCATGGATGACTTTGAAGATGACGGTGGCAGCACCCATGGCCACGGCGGTGAAGGAGGAGGCGGTGGAGGTGGAGGTGGCGGAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTTGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCG
CCGTGGTGCAAAAGAAGGTAAGCATTCTTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGTTGATGCAAGTGCAGGCAGTGCCGCAGCCGTGGCTGCTGTTGCGGTTG
CGGTCACGGCGGTGACCATGGATGACTTTGAAGATGACGGTGGCAGCACCCATGGCCACGGCGGTGAAGGAGGAGGCGGTGGAGGTGGAGGTGGCGGAGATTAG
Protein sequenceShow/hide protein sequence
MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGGGGGGD