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Tan0012846 (gene) of Snake gourd v1 genome

Gene IDTan0012846
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionWound-responsive family protein
Genome locationLG02:2267909..2268646
RNA-Seq ExpressionTan0012846
SyntenyTan0012846
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455356.1 PREDICTED: uncharacterized protein LOC103495543 [Cucumis melo]1.9e-3492.94Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN
        MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRL+ SSAAVVS+  QQKQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN

XP_011658732.1 uncharacterized protein LOC101213259 [Cucumis sativus]8.4e-3594.12Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSA-NQQKQSEESLRTVMYLSCWGPN
        MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRL+ SSAAVVS+  QQKQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSA-NQQKQSEESLRTVMYLSCWGPN

XP_022969311.1 uncharacterized protein LOC111468355 [Cucurbita maxima]8.2e-3080.95Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +LS +S A VS  + KQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

XP_023554652.1 uncharacterized protein LOC111811840 [Cucurbita pepo subsp. pepo]1.4e-2980.95Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +LS  S A VS  + KQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

XP_038888463.1 uncharacterized protein LOC120078299 [Benincasa hispida]2.7e-3391.76Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSA-NQQKQSEESLRTVMYLSCWGPN
        MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYAKNHVRSVPQATRL+ SSAAVVS   QQKQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSA-NQQKQSEESLRTVMYLSCWGPN

TrEMBL top hitse value%identityAlignment
A0A1S3C1F8 uncharacterized protein LOC1034955439.1e-3592.94Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN
        MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRL+ SSAAVVS+  QQKQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN

A0A5D3C6J9 Wound-responsive family protein9.1e-3592.94Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN
        MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYA+NHVRSVPQATRL+ SSAAVVS+  QQKQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSAN-QQKQSEESLRTVMYLSCWGPN

A0A5D3C714 Uncharacterized protein2.6e-2979.76Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MS SR+ W+VAASVGVVEALKDQGICRWNHTIRS  QYAKNHVRS+ QA +LS  SAA VS ++ KQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

A0A6J1GJQ8 uncharacterized protein LOC1114549192.6e-2979.76Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MSSSRRAW+VAASVGVVEALKDQG+CRWNH I+S  QYAKNHVRSV QA +LS  S A VS  + KQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

A0A6J1HXF9 uncharacterized protein LOC1114683554.0e-3080.95Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MSSSRRAW+VAASVGVVEALKDQG+CRWNHTI+S  QYAKNHVRSV QA +LS +S A VS  + KQSEESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10265.1 Wound-responsive family protein1.1e-2464.71Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN
        MSS+ + W+VAAS+G VEALKDQ G+CRWN+ IRSA+QY +N++RSV QA +LS SS  +   N+ KQ+EESLRTVMYLSCWGP+
Subjt:  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN

AT4G10270.1 Wound-responsive family protein6.0e-2361.11Show/hide
Query:  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLSRS--SAAVVSANQQ---KQSEESLRTVMYLSCWGPN
        MSS+ +AW VA S+G VEALKDQ G+CRWN+ +RS +Q+ +N+VRSV Q  R S S  SAAV S+ +    K++EESLRTVMYLSCWGPN
Subjt:  MSSSRRAWIVAASVGVVEALKDQ-GICRWNHTIRSAHQYAKNHVRSVPQATRLSRS--SAAVVSANQQ---KQSEESLRTVMYLSCWGPN

AT4G33560.1 Wound-responsive family protein3.2e-0836.36Show/hide
Query:  SSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLS--RSSAAVVSANQQKQS----EESLRTVMYLSCWGP
        +  + +W VA ++  VE LKDQG+ RWN+  R  H+ A   VR++   +R S   SS++  S   +  S    E S    M LSC+GP
Subjt:  SSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLS--RSSAAVVSANQQKQS----EESLRTVMYLSCWGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCATCAAGAAGAGCTTGGATTGTAGCGGCGAGTGTGGGCGTTGTGGAGGCCTTAAAGGACCAAGGAATTTGCCGATGGAACCACACGATTAGATCGGCGCATCA
GTACGCCAAAAACCATGTCAGATCGGTCCCTCAGGCCACCAGATTGAGCCGGTCGTCGGCCGCCGTGGTTTCCGCCAATCAGCAGAAGCAATCGGAGGAATCTTTGAGAA
CTGTCATGTATTTGAGCTGTTGGGGTCCTAATTAA
mRNA sequenceShow/hide mRNA sequence
CAGGAAAGAAAGTACAAATCCAGCCCGACCACCGAAACAAAAAAAACCACGGGCAGTTTCGAAAGCTACATCCTCCTAACATCTCTCTATATAGTCCAGCCCATCAAAAT
TAACAAACACAAAATTTTCAAAGCTAAAAAGGAGCAAGAAGAAGAAAAAACAAAGGAAAAGAAAAAAAAAATGAGTTCATCAAGAAGAGCTTGGATTGTAGCGGCGAGTG
TGGGCGTTGTGGAGGCCTTAAAGGACCAAGGAATTTGCCGATGGAACCACACGATTAGATCGGCGCATCAGTACGCCAAAAACCATGTCAGATCGGTCCCTCAGGCCACC
AGATTGAGCCGGTCGTCGGCCGCCGTGGTTTCCGCCAATCAGCAGAAGCAATCGGAGGAATCTTTGAGAACTGTCATGTATTTGAGCTGTTGGGGTCCTAATTAATCCCT
TCGAGAAATAGATTTTGACACCAAACGCCGCCGCCACCGCCGGAGACGCTCTCGGCGAGGTTGGGTTAATCGACAGGCGAAAAAATCGCCGGTGGGGATTTGTAATATAG
CGATGTATAATATGAATTGGGGATTTGCTGTTAATGAAAATCAAACAATTTACTGTCCTTATCCTCTATCTTTCGCTTTTGTTGCAGATTAATTTTTATTTCTTCCAACG
AAAATAAAACTCAAGGGCTGGATTAAATGAATGTTTAAAAACACTTTTTTTTCTTTTAAGGTTCACCCCCAATTTTAG
Protein sequenceShow/hide protein sequence
MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLSRSSAAVVSANQQKQSEESLRTVMYLSCWGPN