; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012851 (gene) of Snake gourd v1 genome

Gene IDTan0012851
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionscarecrow-like transcription factor 11 (SCL11)
Genome locationLG05:2921131..2924172
RNA-Seq ExpressionTan0012851
SyntenyTan0012851
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
InterPro domainsIPR019324 - M-phase phosphoprotein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570693.1 hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia]3.1e-8589.36Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRELSNTLRNLKFMQRA QREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPG   GRMSFQ FNPSID+LNEEVASLGQ EIPGSSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSR+NGSS+NEA CSNIDEKNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  +KPKGEKLDWNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
XP_022943952.1 uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]2.0e-8487.77Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPG   GRMSFQ FNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSR+NGSS+NEA CSNIDEKNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  +KPKGEKLDWNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
XP_022947916.1 uncharacterized protein LOC111451657 [Cucurbita moschata]3.4e-8488.83Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLNEEVASLGQ+E P  SSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSRENGSSRNEAV SN DEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFF+KPKGE LDWNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
XP_023007374.1 uncharacterized protein LOC111499887 [Cucurbita maxima]1.3e-8388.83Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLNEEVASLGQ+E   SSSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSRENGSSRNEAV SN DEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFF+KPKGE LDWNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
XP_023532308.1 uncharacterized protein LOC111794500 isoform X1 [Cucurbita pepo subsp. pepo]8.9e-8589.36Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLNEEVASLGQ+E P SSSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSRENGSSRNEAV SN DEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFF+KPKGE LDWNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
TrEMBL top hitse value%identityAlignment
A0A6J1FT40 uncharacterized protein LOC111448524 isoform X11.2e-8284.62Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPG   GRMSFQ FNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSS-------RENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SS       R+NGSS+NEA CSNIDEKNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  +KPKGEKLDWNVLRPSKTPNKSG
Subjt:  RSS-------RENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
A0A6J1FUG1 uncharacterized protein LOC111448524 isoform X29.6e-8587.77Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRELSNTLRNLKFMQRA QRE+QPK+EEEVKPDENFFPSSTIIRKCVVLVEGDPHPG   GRMSFQ FNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSR+NGSS+NEA CSNIDEKNCE N DLKRKQSEVVS+GRHPTKFP+SGRDNQQSSF++GKG  +KPKGEKLDWNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
A0A6J1G7T2 uncharacterized protein LOC1114516571.6e-8488.83Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLNEEVASLGQ+E P  SSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSRENGSSRNEAV SN DEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFF+KPKGE LDWNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
A0A6J1JFF6 uncharacterized protein LOC111484532 isoform X23.5e-7984.57Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRELSNTLRNLKFMQRA QREE PKKEEEVK DENFFPSSTIIRKCVVLVEGD HPG   GRMSFQ FNPSID+LNE+VASL Q EIPGSS GNH GN
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSR+NGSS+NEA CSN DEKNCE N DLKRKQS VVS+GRHPTKFP+SGRDNQQSSF++GKG  +KPKGEKLDWNVLRPSKTPNKSG
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
A0A6J1L4S0 uncharacterized protein LOC1114998876.2e-8488.83Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQPKKEEEVKP+EN FPSS IIRKCVVLVEGDPHPG   GR+SFQ FNPSIDKLNEEVASLGQ+E   SSSGNHS N
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
         SSRENGSSRNEAV SN DEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFF+KPKGE LDWNVLRPSKTPNK G
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59460.1 scarecrow-like transcription factor 11 (SCL11)2.7e-3150.27Show/hide
Query:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+S+TLRNLKFMQR++ + E+ K +EE +P+ +F    T+ +KCVV+ + DP PG   GRMSFQ FNPSI+KL+EE  + G    P SSS N  G 
Subjt:  MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGG-PGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRH-PTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNK
        +S  E  SS+         E + ET+GDLKRKQSEVVSE ++ P K P+S  D    S   G G F+KPK +K+DW+VLRP K   K
Subjt:  RSSRENGSSRNEAVCSNIDEKNCETNGDLKRKQSEVVSEGRH-PTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCGCGAGCTTTCAAATACATTAAGAAACTTGAAGTTTATGCAAAGGGCGGCTCAGAGAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAACCTGATGAGAA
TTTCTTTCCCTCGAGCACTATAATCAGAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGGTCCAGGTCGAATGTCATTTCAAGGCTTTAATCCTTCAATTG
ATAAACTCAATGAAGAAGTAGCTAGCTTAGGTCAGCAAGAAATTCCTGGCTCTTCATCTGGGAATCACAGTGGAAACCGTTCATCAAGAGAAAATGGATCTTCACGAAAT
GAAGCAGTGTGCTCAAACATTGATGAAAAAAATTGTGAGACTAATGGGGACCTTAAAAGGAAACAATCTGAGGTAGTGTCTGAAGGACGACATCCAACTAAGTTTCCAAA
AAGTGGTCGGGACAATCAGCAATCATCATTTAATAATGGTAAAGGATTCTTCAGGAAACCAAAGGGTGAAAAGCTGGACTGGAATGTCCTTAGACCCTCTAAGACTCCAA
ATAAGAGTGGATAA
mRNA sequenceShow/hide mRNA sequence
TGTAATTTGGTGTCGATTCGAGGTTATATTGGGTAATCAAGAAATTGAACATTGATCCTCAGAGAAACCCTCATTCCCCGCCCGTAGGCGCAGATTGCAGAGAGTTTCAA
GGTTGCGCGCGCTCGTAAACGCGAAAGCGAAAGAGAAAGAGACACAGAAAAGAGATTAGCGAGTGAAGTTCGTGGTTCGAGGTTTCCTTTGCCCTAGCTATTATGGCGAA
GCGCGAGCTTTCAAATACATTAAGAAACTTGAAGTTTATGCAAAGGGCGGCTCAGAGAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAACCTGATGAGAATTTCTTTC
CCTCGAGCACTATAATCAGAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGGTCCAGGTCGAATGTCATTTCAAGGCTTTAATCCTTCAATTGATAAACTC
AATGAAGAAGTAGCTAGCTTAGGTCAGCAAGAAATTCCTGGCTCTTCATCTGGGAATCACAGTGGAAACCGTTCATCAAGAGAAAATGGATCTTCACGAAATGAAGCAGT
GTGCTCAAACATTGATGAAAAAAATTGTGAGACTAATGGGGACCTTAAAAGGAAACAATCTGAGGTAGTGTCTGAAGGACGACATCCAACTAAGTTTCCAAAAAGTGGTC
GGGACAATCAGCAATCATCATTTAATAATGGTAAAGGATTCTTCAGGAAACCAAAGGGTGAAAAGCTGGACTGGAATGTCCTTAGACCCTCTAAGACTCCAAATAAGAGT
GGATAACCTTGTGTAGGAGAGTCTTTAGATGGTGGAGAATCCAGTTCCTATGCTCTTGGGAAATTGTATCGACTTGCCATATTTTGTAGTTATATAGGACTGTTAAACAT
TACCTGAATTGAAAGTTCATTTAACGTCTCTTATCTTAAAAAGTTCGACGTACTCATATACCACCTCCTTGGAGTTCCCTAATTCATATGTTCCTGTACTTGAATCAAGA
ATGAAACCCAATATTTGGAATATTGTCTGATTTTCTAAGAAACTAGATTTCTGGAAGATTCAGTTGTATTACAAATGGAAAATAGATCCTGCAATTTTCTTTTATAGTTA
GCAATAAGAGTGGAGCTTTTGTTATGATGGTATTTTATGAGATAGAGCAGAATTCATGTGACTTCTTCTGTAGGTTTCTGTGCTCAAGTATTAGAGAGCATTTTAGTGCT
CTGCTTCATCTATGTTTGGTTTGTCTACCGTTGGTTCTATGATCTGTTTACTTTTT
Protein sequenceShow/hide protein sequence
MAKRELSNTLRNLKFMQRAAQREEQPKKEEEVKPDENFFPSSTIIRKCVVLVEGDPHPGGPGRMSFQGFNPSIDKLNEEVASLGQQEIPGSSSGNHSGNRSSRENGSSRN
EAVCSNIDEKNCETNGDLKRKQSEVVSEGRHPTKFPKSGRDNQQSSFNNGKGFFRKPKGEKLDWNVLRPSKTPNKSG